Genetic variation among Rhynchosporium secalis populations of West Asia and North Africa as revealed by RAPD and AFLP analysis

Journal of Phytopathology

Volumn 152, Issue 2, 2004, Pages 106-113

  Von Korff, M ^a   Udupa, S M ^a   Yahyaoui, A ^a   Baum, M ^a  

^a INTERNATIONAL CENTER FOR AGRICULTURAL RESEARCH IN THE DRY AREAS ICARDA   (Syrian Arab Republic)

Author keywords

Amplified fragment length polymorphism; Polymerase chain reaction; Random amplified polymorphism DNA; Rhynchosporium secalis

Indexed keywords

FUNGAL DISEASE; GENETIC ANALYSIS; GENETIC VARIATION; POLYMERASE CHAIN REACTION;

AFRICA; ASIA; EURASIA; NORTH AFRICA; WEST ASIA;

MYXOGASTRIA; RHYNCHOSPORIUM; RHYNCHOSPORIUM SECALIS;

EID: 1542321102     PISSN: 09311785     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1439-0434.2003.00809.x     Document Type: Article

References (38)

1. Abbott, D. C., J. J. Burdon, A. M. Jarosz, A. H. D. Brown, W. J. Muller, B. J. Read (1991): The relationship between seedling infection types and field reactions to leaf scald in Clipper barley backcross lines. Aust. J. Agric. Res. 42, 801-809.
2. Ali, S. M., W. J. R. Boyd (1973): Host range and physiological specialization in Rhynchosporium secalis. Aust. J. Agric. Res. 25, 21-31.
3. Ali, S. M., A. H. Mayfield, B. G. Clare (1976): Pathogenicity of 203 isolates of Rhynchosporium secalis on 21 barley cultivars. Plant Pathol. 9, 135-143.
4. Beer, W. W. (1991): Leaf blotch of Barley (Rhynchosporium secalis). Zentralbl. Mikrobiol. 146, 339-358.
5. Boeger J. M., R. S. Chen, B. A. McDonald (1993): Gene flow between geographic populations of Mycosphaerella graminicola (Anamorph Septoria tritici) detected with restriction fragment length polymorphism markers. Phytopathology 83, 1148-1154.
6. Brown, J. S. (1985): Pathogenic variation among isolates of Rhynchosporium secalis from cultivated barley growing in Victoria, Australia. Euphytica 34, 129-133.
7. Burdon, J. J., D. C. Abbott, A. H. D. Brown, J. S. Brown (1994): Genetic structure of the scald pathogen (Rhynchosporium secalis) in southeast Australia: implications for control strategies. Aust. J. Agric. Res. 45, 1445-1454.
8. Ceoloni, C. (1980): Race differentiation and search for sources of resistance to Rhynchosporium secalis in barley in Italy. Euphytica 29, 547-553.
9. Cromey, M. G. (2003): Integrated management of scald in New Zealand crops. Proceedings of the Second International Workshop on Barley Leaf Blight Diseases, ICARDA, Aleppo, Syria, 7-11 April 2002 (in press).
10. Cromey, M. G., R. I. Mulholland (1987): Host specialization of Rhynchosporium secalis in New Zealand. N. Z. J. Agric. Res. 30, 345-348.
11. Dice, L. R. (1945): Measures of the amount of ecologic association between species. Ecology 26, 297-302.
12. Fowler, A. M., H. Owen (1971): Studies of leaf blotch of barley (Rhynchosporium secalis). Trans. Br. Mycol. Soc. 56, 137-152.
13. Garvin, D. F., A. H. D. Brown, J. J. Burdon (1997): Inheritance and chromosome locations of scald-resistance genes derived from Iranian and Turkish wild barleys. Theor. Appl. Genet. 94, 1086-1091.
14. Garvin, D. F., A. H. D. Brown, H. Raman, B. J. Read (2000): Genetic mapping of the barley Rrs14 scald resistance gene with RFLP, isozyme and seed storage protein markers. Plant Breed. 119, 193-196.
15. Goodwin, S. B., R. W. Allard, S. A. Hardy, R. K. Webster (1992): Hierarchical structure of pathogenic variation among Rhynchosporium secalis populations in Idaho and Oregon. Can. J. Bot. 70, 811-817.
16. Goodwin, S. B., M. A. Saghai-Maroof, R. W. Allard, R. K. Webster (1993): Isozyme variation within and among populations of Rhynchosporium secalis in Europe, Australia and the United States. Mycol. Res. 97, 49-58.
17. Jackson, L. F., R. K. Webster (1976): Race differentiation, distribution, and frequency of Rhynchosporium secalis in California. Phytopathology 66, 719-725.
18. Jørgensen, H. J. L., V. Smedegaard-Peterson (1995): Pathogenic variation of Rhynchosporium secalis in Denmark and sources of resistance in barley. Plant Dis. 79, 297-301.
19. Mathre, D. E. (1987): Compendium of Barley Diseases. American Phytopathological Society Press, St Paul, MN.
20. McDermott, J. M., B. A. McDonald, R. W. Allard, R. K. Webster (1989): Genetic variability for pathogenicity, isozyme, ribosomal DNA and colony color variants in populations of Rhynchosporium secalis. Genetics 122, 561-565.
21. McDonald, B. A. (1997): The population genetics of fungi: tools and techniques. Phytopathology 87, 448-453.
22. McDonald, B. A., J. Zhan, J. J. Burdon (1999): Genetic structure of Rhynchosporium secalis in Australia. Phytopathology 89, 639-645.
23. Nei, M. (1973): Analysis of gene diversity in subdivided populations. Proc. Natl Acad. Sci. USA 70, 3321-3323.
24. Nei, M. (1987): Molecular Evolutionary Genetics. Columbia University Press, New York, NY.
25. Nei, M., W. H. Li (1979): Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl Acad. Sci. USA 76, 5269-5273.
26. Penner, G. A., W. G. Legge, A. Tekauz (1998): Identification of isolate specific sources of scald resistance in Turkish barley (Hordeum vulgare) accessions. Euphytica 99, 111-114.
27. Rohlf, F. J. (1997): NTSYS-PC 2.02i: Numerical Taxonomy and Multivariate Analysis System. Exeter Software Setauket, New York, NY.
28. Salamati, S., J. Zhan, J. J. Burdon, B. A. McDonald (2000): The genetic structure of field populations of Rhynchosporium secalis from three continents suggests moderate gene flow and regular recombination. Phytopathology 90, 901-908.
29. Sneath, P. H. A., R. R. Sokal (1973): Numerical Taxonomy. Freeman, San Francisco, CA.
30. Turkington, T. K., K. Xi, J. P. Tewari, A. Tekauz, G. W. Clayton, H. R. Kutcher, K. N. Harker, K. Bailey (2003): Management of barley leaf diseases in Western Canada. Proceedings of the Second International Workshop on Barley Leaf Blight Diseases, ICARDA, Aleppo, Syria, 7-11 April 2002 (in press).
31. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. van de Lee, M. Hornes, A. Frijters, J. Pot, J. Peleman, M. Kuiper, M. Zabeau (1995): AFLP: a new technique for DNA fingerprinting. Nucl. Acids. Res. 23, 4407-4414.
32. Watson, I. A. (1981): Wheat and its rust parasites in Australia. In: L. T. Evans and W. J. Peacock (eds), Wheat Science - Today and Tomorrow, pp. 129-147. Cambridge University Press, Cambridge.
33. Williams, J. G., A. R. Kubelik, K. J. Livak, J. A. Rafalski, S. V. Tingey (1990): DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl. Acids Res. 18, 6531-6535.
34. Williams, K., S. Donnellan, C. Smyl, L. Scott, H. Wallwork (2003): Molecular variation in Rhynchosporium secalis isolates obtained from hotspots. Australasian Plant Pathol. 32, 257-262.
35. Wright, S. (1951): The genetical structure of populations. Ann. Eugen. 15, 323-354.
36. Yahyaoui, A. H. (2003): Occurrence of barley leaf blight diseases in Central West Asia and North Africa. Proceedings of the Second International Workshop on Barley Leaf Blight Diseases, ICARDA, Aleppo, Syria, 7-11 April 2002 (in press).
37. Yap, I. V., R. J. Nelson (1996): Winboot: a program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms. IRRI discussion paper, IRRI, Los Banos, Philippines.
38. Yeh, F. C., T. J. B. Boyle (1997): Population genetic analysis of co-dominant and dominant markers and quantitative traits. Belgian J. Botany 129, 157.