Detection of mutations associated with macrolide resistance in thermophilic Campylobacter spp. by real-time PCR

Microbial Drug Resistance

Volumn 11, Issue 1, 2005, Pages 40-47

  Vacher, Sylvie ^b   Menard, Armelle ^a   Bernard, Elisabeth ^b   Santos, Adriana ^b   Megraud, Francis ^b  

^a UNIVERSITÉ DE BORDEAUX   (France)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

ERYTHROMYCIN; MACROLIDE; RIBOSOME DNA; RIBOSOME RNA;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL MUTATION; BACTERIAL STRAIN; CAMPYLOBACTER; CAMPYLOBACTER JEJUNI; CAMPYLOBACTER LARI; FLUORESCENCE RESONANCE ENERGY TRANSFER; GENE AMPLIFICATION; GENOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; POINT MUTATION; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION;

BACTERIA (MICROORGANISMS); CAMPYLOBACTER; CAMPYLOBACTER COLI; CAMPYLOBACTER JEJUNI; CAMPYLOBACTER LARI; CHARADRII;

EID: 14944364946     PISSN: 10766294     EISSN: None     Source Type: Journal    
DOI: 10.1089/mdr.2005.11.40     Document Type: Article

References (33)

1. Aarestrup, F.M., E.M. Nielsen, M. Madsen, and J. Engberg. 1997. Antimicrobial susceptibility patterns of thermophilic Campylobacter spp. from humans, pigs, cattle, and broilers in Denmark. Antimicrob. Agents. Chemother. 41:2244-2250.
2. Allos, B.M. 2001. Campylobacter jejuni infections: update on emerging issues and trends. Clin. Infect. Dis. 32:1201-1206.
3. Butzler, J.P., and F. Mégraud. 1997. Campylobacter and Helicobacter pylori. In S.H. Zinner, L.S. Young, H.F. Acar, and H.C. Neu (eds.), Expanding indications for the new macrolides, azalides, and streptogramins. Marcel Dekker, Inc., New York, pp. 237-249.
4. Chisholm, S.A., R.J. Owen, E.L. Teare, and S. Saverymuttu. 2001. PCR-based diagnosis of Helicobacter pylori infection and real-time determination of clarithromycin resistance directly from human gastric biopsy samples. J. Clin. Microbiol. 39: 1217-1220.
5. Chuma, T., T, Ikeda, T. Maeda, H. Niwa, and K. Okamoto. 2001. Antimicrobial susceptibilities of Campylobacter strains isolated from broilers in the southern part of Japan from 1995 to 1999. J. Veterin. Med. Sci. 63:1027-1029.
6. Corpet, F. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids. Res. 16:10881-10890.
7. Engberg, J., P.M. Aarestrup, D.E. Taylor, P. Gerner-Smidt, and I. Nachamkin. 2001. Quinolone and macrolide resistance in Campylobacter jejuni and C. coli: resistance mechanisms and trends in human isolates. Emerg. Infect. Dis. 7:24-34.
8. Friedman, C.R., J. Neimann, H.C. Wegener, and R.V. Tauxe. 2000. Epidemiology of Campylobacter jejuni infections in the United States and other industrialized nations. In I. Nachamkin and M.J. Blaser (eds.), Campylobacter, 2nd ed. American Society for Microbiology, Washington, D.C., pp. 121-138.
9. Funke, G., R. Baumann, J.L. Penner, and M. Altwegg. 1994. Development of resistance to macrolide antibiotics in an AIDS patient treated with clarithromycin for Campylobacter jejuni diarrhea. Eur. J. Clin. Microbiol. Infect. Dis. 13:612-615.
10. Gibson, J.R., N.A. Saunders, B. Burke, and R.J. Owen. 1999. Novel method for rapid determination of clarithromycin sensitivity in Helicobacter pylori. J. Clin. Microbiol. 37:3746-3748.
11. Gupta, A., J.M. Nelson, T.J. Barrett, R.V. Tauxe, S.P. Rossiter, C.R. Friedman, K.W. Joyce, K.E. Smith, T.F. Jones, M.A. Hawkins, B. Shiferaw, J.L. Beebe, D.J. Vugia, T. Rabatsky-Ehr, J.A. Benson, T.P. Root, and F.J. Angulo. 2004. Antimicrobial resistance among Campylobacter strains, United States, 1997-2001. Emerg. Infect. Dis. 10:1102-1109.
12. Jensen, L.B., and F.M. Aarestrup. 2001. Macrolide resistance in Campylobacter coli of animal origin in Denmark. Antimicrob. Agents Chemother. 45:371-372.
13. Matsumura, M., Y. Hikiba, K. Ogura, G. Togo, I. Tsukuda, K. Ushikawa, Y. Shiratori, and M. Omata. 2001. Rapid detection of mutations in the 23S rRNA gene of Helicobacter pylori that confers resistance to clarithromycin treatment to the bacterium. J. Clin. Microbiol. 39:691-695.
14. Mégraud, F. 2003. Les infections à Campylobacter en France (1986-2000). In Surveillance Nationale des maladies infectieuses 1998-2000. Institut de Veille Sanitaire, Saint Maurice, pp. 133-135.
15. Comité de l'Antibiogramme de la Société Française de Microbiologie. 2002. Concentrations, diamètres critiques et règles de lecture interprétative pour Campylobacter spp. In C.J. Soussy (ed.), Société Française de Microbiologie, Paris, pp. 44.
16. Moore, J.E., M. Crowe, N. Heaney, and E. Crothers. 2001. Antibiotic resistance in Campylobacter spp. isolated from human faeces (1980-2000) and foods (1997-2000) in Northern Ireland: an update. J. Antimicrob. Chemother. 48:455-457.
17. Nachamkin, I. 1995. Campylobacter and Arcobacter. In P.R. Murray, E.J. Baron, M.A. Pfaller, F.C. Tenover, and R.H. Yolken (eds.), Manual of Clinical Microbiology. ASM Press, Washington, D.C., pp. 483-491.
18. NCCLS. 2002. Performance Standards for Antimicrobial Disk and Dilution Susceptibility Tests for Bacterial Isolated from Animals; Approved Standard, 2nd ed. M31-A2, 22 No.6.
19. Niwa, H., T. Chuma, K. Okamoto, and K. Itoh. 2001. Rapid detection of mutations associated with resistance to erythromycin in Campylobacter jejuni/coli by PCR and line probe assay. Int. J. Antimicrob. Agents. 18:359-364.
20. Occhialini, A., M. Urdaci, F. Doucet-Populaire, C.M. Bébé ar, H. Lamouliatte, and F. Mégraud. 1997. Macrolide resistance in Helicobacter pylori: rapid detection of point mutations and assays of macrolide binding to ribosomes. Antimicrob. Agents. Chemother. 41:2724-2728.
21. Oleastro, M., A. Ménard, A. Santos, H. Lamouliatte, L. Monteiro, P. Barthélémy, and F. Mégraud. 2003. Real-time PCR assay for rapid and accurate detection of point mutations conferring resistance to clarithromycin in Helicobacter pylori. J. Clin. Microbiol. 41:397-402.
22. Parkhill, J., B.W. Wren, K. Mungall, J.M. Ketley, C. Churcher, D. Basham, T. Chillingworth, R.M. Davies, T. Feltwell, S. Holroyd, K. Jagels, A.V. Karlyshev, S. Moule, M.J. Pallen, C.W. Penn, M.A. Quail, M.A. Rajandream, K.M. Rutherford, A.H.M. vanVliet, S. Whitehead, and B.C. Barrell. 2000. The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences. Nature 403:665-668.
23. Sanchez, R., V. Fernandez-Baca, M.D. Diaz, P. Munoz, M. Rodriguez-Creixems, and E. Bouza. 1994. Evolution of susceptibilities of Campylobacter spp. to quinolones and macrolides. Antimicrob. Agents Chemother. 38:1879-1882.
24. Stonnet, V., and J.L. Guesdon. 1993. Campylobacter jejuni: specific oligonucleotides and DNA probes for use in polymerase chain reaction-based diagnosis. FEMS Immunol. Med. Microbiol. 7:337-344.
25. Stonnet, V., L. Sicinschi, F. Mégraud, and J.L. Guesdon. 1995. Rapid detection of Campylobacter jejuni and Campylobacter coli isolated from clinical specimens using the polymerase chain reaction. Eur. J. Clin. Microbiol. Infect. Dis. 14:355-359.
26. Taylor, D.E., Z. Ge, D. Purych, T. Lo, and K. Hiratsuka. 1997. Cloning and sequence analysis of two copies of a 23S rRNA gene from Helicobacter pylori and association of clarithromycin resistance with 23S rRNA mutations. Antimicrob. Agents. Chemother. 41:2621-2628.
27. Trieber, C., and D. Taylor. 2000. Mechanisms of antibiotic resistance in Campylobacter. In I. Nachamkin and M.J. Blaser (eds.), Campylobacter, 2nd ed. American Society for Microbiology, Washington D.C., pp. 441-454.
28. Vacher, S., A. Menard, E. Bernard, and F. Megraud. 2003. PCR-restriction fragment length polymorphism analysis for detection of point mutations associated with macrolide resistance in Campylobacter spp. Antimicrob. Agents Chemother. 47:1125-1128.
29. van der Ende, A., L.J. van Doom, S. Rooijakkers, M. Feller, G.N.J. Tytgat, and J. Dankert. 2001. Clarithromycin-susceptible and -resistant Helicobacter pylori isolates with identical randomly amplified polymorphic DNA-PCR genotypes cultured from single gastric biopsy specimens prior to antibiotic therapy. J. Clin. Microbiol. 39:2648-2651.
30. van Doorn, L.-J., Y.J. Debets-Ossenkopp, A. Marais, R. Sanna, F. Mégraud, J.G. Kusters, and W.G.V. Quint. 1999. Rapid detection, by PCR and reverse hybridization, of mutations in the Helicobacter pylori 23S rRNA gene, associated with macrolide resistance. Antimicrob. Agents. Chemother. 43:1779-1782.
31. Van Looveren, M., G. Daube, L. De Zutter, J.M. Dumont, C. Lammens, M. Wijdooghe, P. Vandamme, M. Jouret, M. Cornells, and H. Goossens. 2001. Antimicrobial susceptibilities of Campylobacter strains isolated from food animals in Belgium. J. Antimicrob. Chemother. 48:235-240.
32. Vandamme, P. 2000. Taxonomy of the family Campylobacteraceae. In I. Nachamkin and M.J. Blaser (eds.), Campylobacter, 2nd ed. American Society for Microbiology, Washington DC, pp. 3-26.
33. Versalovic, J., D. Shortridge, K. Kibler, M.V. Griffy, J. Beyer, R.K. Flamm, S.K. Tanaka, D.Y. Graham, and M.F. Go. 1996. Mutations in 23S rRNA are associated with clarithromycin resistance in Helicobacter pylori. Antimicrob. Agents. Chemother. 40:477-480.