Photocycle of the flavin-binding photoreceptor AppA, a bacterial transcriptional antirepressor of photosynthesis genes

Biochemistry

Volumn 44, Issue 10, 2005, Pages 3653-3662

  Gauden, Magdalena ^a   Yeremenko, Sergey ^b   Laan, Wouter ^b   Van Stokkum, Ivo H M ^a   Ihalainen, Janne A ^a   Van Grondelle, Rienk ^a   Hellingwerf, Klaas J ^b   Kennis, John T M ^a  

^a VU UNIVERSITY AMSTERDAM   (Netherlands)

^b UNIVERSITY OF AMSTERDAM   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION SPECTROSCOPY; FLUORESCENCE; GENES; OXYGEN; PHOTOLYSIS; PHOTOSYNTHESIS; PROTEINS;

GENE EXPRESSION; OXYGEN TENSION; PHOTOCYCLES; PHOTORECEPTORS;

BACTERIA;

FLAVINE ADENINE NUCLEOTIDE; FLAVOPROTEIN; QUERCETIN;

ABSORPTION; AMINO TERMINAL SEQUENCE; ARTICLE; BLUE LIGHT; DATA ANALYSIS; FLUORESCENCE; FLUORESCENCE SPECTROSCOPY; GENE EXPRESSION; OXYGEN TENSION; PHOTOLYSIS; PHOTORECEPTOR; PHOTOSYNTHESIS; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN PURIFICATION; QUANTUM YIELD; RHODOBACTER SPHAEROIDES; SPECTROSCOPY;

BACTERIAL PROTEINS; FLAVIN-ADENINE DINUCLEOTIDE; FLAVINS; FLAVOPROTEINS; MODELS, CHEMICAL; NANOTECHNOLOGY; PEPTIDE FRAGMENTS; PHOTOLYSIS; PHOTOSYNTHESIS; PROTEIN STRUCTURE, TERTIARY; REPRESSOR PROTEINS; RHODOBACTER SPHAEROIDES; SIGNAL TRANSDUCTION; SPECTROMETRY, FLUORESCENCE; SPECTROPHOTOMETRY; TRANSCRIPTION FACTORS;

BACTERIA (MICROORGANISMS); MUS; RHODOBACTER SPHAEROIDES;

EID: 14844365385     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi047359a     Document Type: Article

References (29)

1. van der Horst, M. A., and Hellingwerf, K. J. (2004) Photoreceptor Proteins, "Star Actors of Modern Times": A Review of the Functional Dynamics in the Structure of Representative Members of Six Different Photoreceptor Families, Acc. Chem. Res. 37, 13-20.
2. Fankhauser, C., and Chory, J. (1999) Photomorphogenesis: Light receptor kinases in plants! Curr. Biol. 9, R123-R126.
3. Briggs, W. R., and Huala, E. (1999) Blue-light photoreceptors in higher plants, Annu. Rev. Cell Dev. Biol. 15, 33-62.
4. Braatsch, S., and Klug, G. (2004) Blue light perception in bacteria, Photosynth. Res. 79, 45-57.
5. Salomon, M., Christie, J. M., Knieb, E., Lempert, U., and Briggs, W. R. (2000) Photochemical and mutational analysis of the FMN-binding domains of the plant blue light receptor, phototropin, Biochemistry 39, 9401-9410.
6. Gomelsky, M., and Klug, G. (2002) BLUF: A novel FAD-binding domain involved in sensory transduction in microorganisms, Trends Biochem. Sci. 27, 497-500.
7. Gomelsky, M., and Kaplan, S. (1998) AppA, a Redox Regulator of Photosystem Formation in Rhodobacter sphaeroides 2.4.1, Is a Flavoprotein, J. Biol. Chem. 273, 35319-35325.
8. Masuda, S., and Bauer, C. E. (2002) AppA Is a Blue Light Photoreceptor that Antirepresses Photosynthesis Gene Expression in Rhodobacter sphaeroides, Cell 110, 613-623.
9. Kraft, B. J., Masuda, S., Kikuchi, J., Dragnea, V., Tollin, G., Zaleski, J. M., and Bauer, C. E. (2003) Spectroscopic and mutational analysis of the blue-light photoreceptor AppA: A novel photocycle involving flavin stacking with an aromatic amino acid, Biochemistry 42, 6726-6734.
10. Laan, W., van der Horst, M. A., van Stokkum, I. H., and Hellingwerf, K. J. (2003) Initial characterization of the primary photochemistry of AppA, a blue-light-using flavin adenine dinucleotide-domain containing transcriptional antirepressor protein from Rhodobacter sphaeroides: A key role for reversible intramolecular proton transfer from the flavin adenine dinucleotide chromophore to a conserved tyrosine? Photochem. Photobiol. 78, 290-297.
11. Masuda, S., Hasegawa, K., Ishii, A., and Ono, T. (2004) Light-induced structural changes in a putative blue-light receptor with a novel FAD binding fold sensor of blue-light using FAD (BLUF); Slr1694 of Synechocystis sp. PCC6803, Biochemistry 43, 5304-5313.
12. Laan, W., Bednarz, T., Heberle, J., and Hellingwerf, K. J. (2004) Chromophore composition of a heterologously expressed BLUF-domain, Photochem. Photobiol. Sci. 3, 1011-1016.
13. Gobets, B., van Stokkum, I. H. M., Rogner, M., Kruip, J., Schlodder, E., Karapetyan, N. V., Dekker, J. P., and van Grondelle, R. (2001) Time-Resolved Fluorescence Emission Measurements of Photosystem I Particles of Various Cyanobacteria: A Unified Compartmental Model, Biophys. J. 81, 407-424.
14. Gradinaru, C. C., Kennis, J. T. M., Papagiannakis, E., van Stokkum, I. H. M., Cogdell, R. J., Fleming, G. R., Niederman, R. A,, and van Grondelle, R. (2001) An unusual pathway of excitation energy deactivation in carotenoids: Singlet-to-triplet conversion on an ultrafast time scale in a photosynthetic antenna, Proc. Natl. Acad. Sci. U.S.A. 98, 2364-2369.
15. van Stokkum, I. H. M., Larsen, D. S., and van Grondelle, R. (2004) Global and target analysis of time-resolved spectra, Biochim. Biophys. Acta 1657, 82-104.
16. Van den Berg, P. A. W., and Visser, A. J. W. G. (2001) New Trends in Fluorescence Spectroscopy: Applications to Chemical and Life Sciences (Valeur, B., and Brochon, J.-C., Eds.) p 457, Springer, Berlin.
17. Kennis, J. T. M., Crosson, S., Gauden, M., van Stokkum, I. H. M., Moffat, K., and van Grondelle, R. (2003) Primary reactions of the LOV2 domain of phototropin, a plant blue-light photoreceptor, Biochemistry 42, 3385-3392.
18. Sakai, M., and Takahashi, H. (1996) One-electron photoreduction of flavin mononucleotide: Time-resolved resonance Raman and absorption study, J. Mol. Struct. 379, 9-18.
19. Swartz, T. E., Corchnoy, S. B., Christie, J. M., Lewis, J. W., Szundi, I., Briggs, W. R., and Bogomolni, R. A. (2001) The photocycle of a flavin-binding domain of the blue light photoreceptor phototropin, J. Biol. Chem. 276, 36493-36500.
20. Kottke, T., Heberle, J., Hehn, D., Dick, B., and Hegemann, P. (2003) Phot-LOV1: Photocycle of a blue-light receptor domain from the green alga Chlamydomonas reinhardtii, Biophys. J. 84, 1192-1201.
21. Creutz, C., Chou, M., Netzel, T. L., Okumura, M., and Sutin, N. (1980) Lifetimes, spectra, and quenching of the excited states of polypyridine complexes of iron(II), ruthenium(II), and osmium(II), J. Am. Chem. Soc. 102, 1309-1319.
22. Crosby, G. A., and Demas, J. N. (1971) Quantum efficiencies on transition metal complexes. II. Charge-transfer luminescence, J. Am. Chem. Soc. 93, 2841.
23. Bensasson, R., Salet, C., and Balzani, V. (1976) Laser flash spectroscopy of tris(2,2′-bipyridine)ruthenium(II) in solution, J. Am. Chem. Soc. 98, 3722-3724.
24. Bensasson, R., Salet, C., and Balzani, V. (1979) Spectre d'absorption et rendement quantique de formation du premier état excité triplet du rithenium (II) tris(2,2′-bipyridine) en solution aqueuse, C. R. Hebd. Seances Acad. Sci., Ser. B 289, 41-43.
25. Holzer, W., Penzkofer, A., Fuhrmann, M., and Hegemann, P. (2002) Spectroscopic characterization of flavin mononucleotide bound to the LOV1 domain of Phot1 from Chlamydomonas reinhardtii, Photochem. Photobiol. 75, 479-487.
26. Losi, A., and Braslavsky, S. E. (2003) The time-resolved thermodynamics of the chromophore-protein interactions in biological photosensors as derived from photothermal measurements, Phys. Chem. Chem. Phys. 5, 2739-2750.
27. Takeshita, K., Imamoto, Y., Kataoka, M., Mihara, K., Tokunaga F., and Terazima, M. (2002) Structural change of site-directed mutants of PYP: New dynamics during pR state, Biophys. J. 83, 1567-1577.
28. Zhong, D. P., and Zewail, A. H. (2001) Femtosecond dynamics of flavoproteins: Charge separation and recombination in riboflavine (vitamin B-2)-binding protein and in glucose oxidase enzyme, Proc. Natl. Acad. Sci. U.S.A. 98, 11867-11872
29. Muller, M. G., Hucke, M., Reus, M., and Holzwarth, A. R. (1996) Primary processes and structure of the photosystem II reaction center. 4. Low-intensity femtosecond transient absorption spectra of D1-D2-cyt-b559 reaction center, J. Phys. Chem. 100, 9527-9536.