메뉴 건너뛰기




Volumn 71, Issue 1, 2005, Pages 174-182

Characterization of depth-related changes and site-specific differences of microbial communities in marine sediments using quinone profiles

Author keywords

Marine sediment; Menaquinone; Methylmenaquinone; Microbial community; Respiratory quinone profiles; Ubiquinone

Indexed keywords

ACTINOBACTERIA;

EID: 14744288362     PISSN: 09199268     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1444-2906.2005.00945.x     Document Type: Article
Times cited : (6)

References (35)
  • 2
    • 0000129625 scopus 로고
    • Contribution of bacterial lipids to recent marine sediments
    • Johns RB, Perry GJ, Jackson KS. Contribution of bacterial lipids to recent marine sediments. Estuar Coast. Mar. Sci. 1977; 5: 521-529.
    • (1977) Estuar Coast. Mar. Sci. , vol.5 , pp. 521-529
    • Johns, R.B.1    Perry, G.J.2    Jackson, K.S.3
  • 3
    • 33645384503 scopus 로고
    • Determination of the sedimentary microbial biomass by extractible lipid phosphate
    • White DC, Davis WM, Nickels JS, King JD, Bobbie RJ. Determination of the sedimentary microbial biomass by extractible lipid phosphate. Oecologia 1979; 40: 51-62.
    • (1979) Oecologia , vol.40 , pp. 51-62
    • White, D.C.1    Davis, W.M.2    Nickels, J.S.3    King, J.D.4    Bobbie, R.J.5
  • 4
    • 0031865448 scopus 로고    scopus 로고
    • Seasonal variation in the structure of a marine benthic microbial community
    • Findlay RH, Watling L. Seasonal variation in the structure of a marine benthic microbial community. Microbial. Ecol. 1998; 36: 23-30.
    • (1998) Microbial. Ecol. , vol.36 , pp. 23-30
    • Findlay, R.H.1    Watling, L.2
  • 5
    • 0019490792 scopus 로고
    • Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication
    • Collins MD, Jones D. Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. Microbiol. Rev. 1981; 45: 316-354.
    • (1981) Microbiol. Rev. , vol.45 , pp. 316-354
    • Collins, M.D.1    Jones, D.2
  • 6
    • 0023018045 scopus 로고
    • Microbial respiratory quinones in the environment. I. A sensitive liquid chromatographic method
    • Hedrick DB, White DC. Microbial respiratory quinones in the environment. I. A sensitive liquid chromatographic method. J. Microbiol. Methods 1986; 5: 243-254.
    • (1986) J. Microbiol. Methods , vol.5 , pp. 243-254
    • Hedrick, D.B.1    White, D.C.2
  • 7
    • 0032032261 scopus 로고    scopus 로고
    • Quinone profiling of bacterial communities in natural and synthetic sewage activated sludge for enhanced phosphate removal
    • Hiraishi A, Ueda Y, Ishihara J. Quinone profiling of bacterial communities in natural and synthetic sewage activated sludge for enhanced phosphate removal. Appl. Environ. Microbiol. 1998; 64: 992-998.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 992-998
    • Hiraishi, A.1    Ueda, Y.2    Ishihara, J.3
  • 8
    • 0024577484 scopus 로고
    • Characterization of the bacterial population structure in an anaerobic-aerobic activated sludge system on the basis of respiratory quinone profiles
    • Hiraishi A, Masamune K, Kitamura H. Characterization of the bacterial population structure in an anaerobic-aerobic activated sludge system on the basis of respiratory quinone profiles. Appl. Environ. Microbiol. 1989; 55: 897-901.
    • (1989) Appl. Environ. Microbiol. , vol.55 , pp. 897-901
    • Hiraishi, A.1    Masamune, K.2    Kitamura, H.3
  • 9
    • 0035117065 scopus 로고    scopus 로고
    • Characterization of microbial community in an activated sludge process treating domestic wastewater using quinone profiles
    • Hu HY, Lim BR, Goto N, Bhupathiraju VK, Fujie K. Characterization of microbial community in an activated sludge process treating domestic wastewater using quinone profiles. Wat. Sci. Tech. 2001; 43: 99-106.
    • (2001) Wat. Sci. Tech. , vol.43 , pp. 99-106
    • Hu, H.Y.1    Lim, B.R.2    Goto, N.3    Bhupathiraju, V.K.4    Fujie, K.5
  • 10
    • 0032412601 scopus 로고    scopus 로고
    • Long-term changes in microbial community structure in soils subjected to different fertilizing practices revealed by quinone profile analysis
    • Katayama A, Hu HY, Nozawa M, Yamakawa H, Fujie K. Long-term changes in microbial community structure in soils subjected to different fertilizing practices revealed by quinone profile analysis. Soil Sci. Plant Nutr. 1998; 44: 559-569.
    • (1998) Soil Sci. Plant Nutr. , vol.44 , pp. 559-569
    • Katayama, A.1    Hu, H.Y.2    Nozawa, M.3    Yamakawa, H.4    Fujie, K.5
  • 11
    • 0033510663 scopus 로고    scopus 로고
    • Quinone profiles in lake sediments: Implications for microbial diversity and community structures
    • Hiraishi A, Kato K. Quinone profiles in lake sediments: implications for microbial diversity and community structures. J. Gen. Appl. Microbiol. 1999; 45: 221-227.
    • (1999) J. Gen. Appl. Microbiol. , vol.45 , pp. 221-227
    • Hiraishi, A.1    Kato, K.2
  • 12
  • 13
    • 0034554798 scopus 로고    scopus 로고
    • Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling
    • Urakawa H, Yoshida T, Nishimura M, Ohwada K. Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling. Environ. Microbiol. 2000; 2: 542-554.
    • (2000) Environ. Microbiol. , vol.2 , pp. 542-554
    • Urakawa, H.1    Yoshida, T.2    Nishimura, M.3    Ohwada, K.4
  • 14
    • 0018158109 scopus 로고
    • Determination of contents and redox states of ubiquinone and menaquinone
    • Kröger A. Determination of contents and redox states of ubiquinone and menaquinone. Methods Enzymol. 1978; 53: 579-591.
    • (1978) Methods Enzymol. , vol.53 , pp. 579-591
    • Kröger, A.1
  • 15
    • 0020638681 scopus 로고
    • Analysis of bacterial menaquinone mixtures by high-performance liquid chromatography
    • Tamaoka J, Katayama Y, Kuraishi H. Analysis of bacterial menaquinone mixtures by high-performance liquid chromatography. J. Appl. Bacteriol. 1983; 54: 31-36.
    • (1983) J. Appl. Bacteriol. , vol.54 , pp. 31-36
    • Tamaoka, J.1    Katayama, Y.2    Kuraishi, H.3
  • 16
    • 0001822455 scopus 로고    scopus 로고
    • A new approach to numerical analyses of microbial quinone profiles in the environment
    • Iwasaki M, Hiraishi A. A new approach to numerical analyses of microbial quinone profiles in the environment. Microbes Environ. 1998; 13: 67-76.
    • (1998) Microbes Environ. , vol.13 , pp. 67-76
    • Iwasaki, M.1    Hiraishi, A.2
  • 17
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987; 4: 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 18
    • 0002426836 scopus 로고
    • Respiratory quinones of sulphate-reducing and sulphur-reducing bacteria: A systematic investigation
    • Collins MD, Widdel F. Respiratory quinones of sulphate-reducing and sulphur-reducing bacteria: a systematic investigation. System. Appl. Microbiol. 1986; 8: 8-18.
    • (1986) System. Appl. Microbiol. , vol.8 , pp. 8-18
    • Collins, M.D.1    Widdel, F.2
  • 19
    • 0027184337 scopus 로고
    • Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis
    • Nakagawa Y, Yamasato K. Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis. J. Gen. Microbiol. 1993; 139: 1155-1161.
    • (1993) J. Gen. Microbiol. , vol.139 , pp. 1155-1161
    • Nakagawa, Y.1    Yamasato, K.2
  • 20
    • 0344765523 scopus 로고    scopus 로고
    • Microbial community composition of Wadden Sea sediments as revealed by fluorescence in situ hybridization
    • Llobet-Brossa E, Rossello-Mora R, Amann R. Microbial community composition of Wadden Sea sediments as revealed by fluorescence in situ hybridization. Appl. Environ. Microbiol. 1998; 64: 2691-2696.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2691-2696
    • Llobet-Brossa, E.1    Rossello-Mora, R.2    Amann, R.3
  • 21
    • 0035158607 scopus 로고    scopus 로고
    • Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard)
    • Ravenschlag K, Sahm K, Amann R. Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard). Appl. Environ. Microbiol. 2001; 67: 387-395.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 387-395
    • Ravenschlag, K.1    Sahm, K.2    Amann, R.3
  • 22
    • 0032882298 scopus 로고    scopus 로고
    • Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench
    • Li L, Kato C, Horikoshi K. Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench. Mar. Biotechnol. 1999; 1: 391-400.
    • (1999) Mar. Biotechnol. , vol.1 , pp. 391-400
    • Li, L.1    Kato, C.2    Horikoshi, K.3
  • 23
    • 0032696569 scopus 로고    scopus 로고
    • Microbial diversity in marine sediments from Sagami Bay and Tokyo Bay, Japan, as determined by 16S rRNA gene analysis
    • Urakawa H, Kita-Tsukamoto K, Ohwada K. Microbial diversity in marine sediments from Sagami Bay and Tokyo Bay, Japan, as determined by 16S rRNA gene analysis. Microbiology 1999; 145: 3305-3315.
    • (1999) Microbiology , vol.145 , pp. 3305-3315
    • Urakawa, H.1    Kita-Tsukamoto, K.2    Ohwada, K.3
  • 24
    • 0021073321 scopus 로고
    • Detection of menaquinone-6 and a novel methyl-substituted menaquinone-6 in Campylobacter jejuni and Campylobacter fetus subsp. fetus
    • Carlone GM, Anet FAL. Detection of menaquinone-6 and a novel methyl-substituted menaquinone-6 in Campylobacter jejuni and Campylobacter fetus subsp. fetus. J. Gen. Microbiol. 1983; 129: 3385-3393.
    • (1983) J. Gen. Microbiol. , vol.129 , pp. 3385-3393
    • Carlone, G.M.1    Anet, F.A.L.2
  • 25
    • 0021266918 scopus 로고
    • Menaquinone-6 and thermoplasmaquinone-6 in Wolinella succinogenes
    • Collins MD, Fernandez F. Menaquinone-6 and thermoplasmaquinone-6 in Wolinella succinogenes. FEMS Microbiol. Lett. 1984; 22: 273-276.
    • (1984) FEMS Microbiol. Lett. , vol.22 , pp. 273-276
    • Collins, M.D.1    Fernandez, F.2
  • 26
    • 0021827070 scopus 로고
    • Structure of thermoplasmaquinone from Thermoplasma acidophilus
    • Collins MD. Structure of thermoplasmaquinone from Thermoplasma acidophilus. FEMS Microbiol. Lett. 1985; 28: 21-23.
    • (1985) FEMS Microbiol. Lett. , vol.28 , pp. 21-23
    • Collins, M.D.1
  • 30
    • 0033405958 scopus 로고    scopus 로고
    • Isoprenoid quinones as biomarkers of microbial populations in the environment
    • Hiraishi A. Isoprenoid quinones as biomarkers of microbial populations in the environment. J. Biosci. Bioeng. 1999; 88: 449-460.
    • (1999) J. Biosci. Bioeng. , vol.88 , pp. 449-460
    • Hiraishi, A.1
  • 31
    • 0021029386 scopus 로고
    • Seasonal sedimentation of phytodetritus to the deep-sea benthos
    • Billett DSM, Lampitt RS, Rice AL, Mantoura RFC. Seasonal sedimentation of phytodetritus to the deep-sea benthos. Nature 1983; 302: 520-522.
    • (1983) Nature , vol.302 , pp. 520-522
    • Billett, D.S.M.1    Lampitt, R.S.2    Rice, A.L.3    Mantoura, R.F.C.4
  • 32
    • 0035959655 scopus 로고    scopus 로고
    • Characterization of microbial communities in marine surface sediments by terminal-restriction fragment length polymorphism (T-RFLP) analysis and quinone profiling
    • Urakawa H, Yoshida T, Nishimura M, Ohwada K. Characterization of microbial communities in marine surface sediments by terminal-restriction fragment length polymorphism (T-RFLP) analysis and quinone profiling. Mar. Ecol. Prog. Ser. 2001; 220: 47-57.
    • (2001) Mar. Ecol. Prog. Ser. , vol.220 , pp. 47-57
    • Urakawa, H.1    Yoshida, T.2    Nishimura, M.3    Ohwada, K.4
  • 33
    • 0030427173 scopus 로고    scopus 로고
    • Microbial biomass and activities in deep-sea sediments of the Eastern Mediterranean: Trenches are benthic hotspots
    • Boetius A, Scheibe S, Tselepides A, Thiel H. Microbial biomass and activities in deep-sea sediments of the Eastern Mediterranean: trenches are benthic hotspots. Deep. Sea. Res. Pt I 1996; 43: 1439-1460.
    • (1996) Deep. Sea. Res. Pt I , vol.43 , pp. 1439-1460
    • Boetius, A.1    Scheibe, S.2    Tselepides, A.3    Thiel, H.4
  • 35
    • 0002699305 scopus 로고    scopus 로고
    • Taxonomic significance of morphological and chemotaxonomic characteristics and phylogeny in Gram-positive bacteria
    • Yokota A. Taxonomic significance of morphological and chemotaxonomic characteristics and phylogeny in Gram-positive bacteria. Microbes Environ. 1999; 14: 25-30.
    • (1999) Microbes Environ. , vol.14 , pp. 25-30
    • Yokota, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.