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Volumn 21, Issue 4, 2005, Pages 545-547

Online synonymous codon usage analyses with the ade4 and seqinR packages

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID ANALYSIS; AMINO ACID COMPOSITION; ARTICLE; CODON USAGE; COMPUTER PROGRAM; CONTROLLED STUDY; DATA ANALYSIS; FACTORIAL ANALYSIS; GENE MAPPING; GENETIC DATABASE; GENOMICS; HUMAN COMPUTER INTERACTION; INTERNET; LEISHMANIA MAJOR; MATHEMATICAL COMPUTING; NONHUMAN; ONLINE SYSTEM; PRIORITY JOURNAL; REPRODUCIBILITY; SEQUENCE ANALYSIS; TRYPANOSOMA BRUCEI; TRYPANOSOMA CRUZI;

EID: 14644391463     PISSN: 13674803     EISSN: None     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti037     Document Type: Article
Times cited : (86)

References (8)
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    • Benzécri, J.-P.1
  • 2
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    • Gouy,M., Gautier,C., Attimonelli,M., Lanave,C. and Di Paola,G. (1985) ACNUC - a portable system for nucleic acid sequence databases: logical and physical designs and usage. Comput. Applic. Biosci., 1, 167-172.
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  • 3
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    • Ihaka,R. and Gentleman,R. (1996) R: A language for data analysis and graphics. J. Comp. Graph. Stat., 5, 299-314.
    • (1996) J. Comp. Graph. Stat. , vol.5 , pp. 299-314
    • Ihaka, R.1    Gentleman, R.2
  • 4
    • 0038480747 scopus 로고    scopus 로고
    • Internal correspondence analysis of codon and amino-acid usage in thermophilic bacteria
    • Lobry,J.R. and Chessel,D. (2003) Internal correspondence analysis of codon and amino-acid usage in thermophilic bacteria. J. Appl. Genet., 44, 235-261.
    • (2003) J. Appl. Genet. , vol.44 , pp. 235-261
    • Lobry, J.R.1    Chessel, D.2
  • 5
    • 0031851853 scopus 로고    scopus 로고
    • GCUA (General Codon Usage Analysis)
    • McInerney,J.O. (1998) GCUA (General Codon Usage Analysis). Bioinformatics, 14, 372-373.
    • (1998) Bioinformatics , vol.14 , pp. 372-373
    • McInerney, J.O.1
  • 6
    • 0037109119 scopus 로고    scopus 로고
    • Use and misuse of correspondence analysis in codon usage studies
    • Perrière,G. and Thioulouse,J. (2002) Use and misuse of correspondence analysis in codon usage studies. Nucleic Acids Res., 30, 4548-4555.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4548-4555
    • Perrière, G.1    Thioulouse, J.2
  • 7
    • 0023046874 scopus 로고
    • Codon usage in yeast: Cluster analysis clearly differentiates highly and lowly expressed genes
    • Sharp,P.M., Tuohy,T.M.F. and Mosurski,K.R. (1986) Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes. Nucleic Acids Res., 14, 5125-5143.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 5125-5143
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  • 8
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.