메뉴 건너뛰기




Volumn 275, Issue 2, 2004, Pages 459-472

An enhancer trap in the ascidian Ciona intestinalis identifies enhancers of its Musashi orthologous gene

Author keywords

Ascidian; Ciona intestinalis; Enhancer trap; Minos; Musashi; Transgenic technique

Indexed keywords

GREEN FLUORESCENT PROTEIN; RNA BINDING PROTEIN;

EID: 14244268949     PISSN: 00121606     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ydbio.2004.08.029     Document Type: Article
Times cited : (41)

References (43)
  • 2
    • 77649188033 scopus 로고
    • The development and growth of Ciona
    • N.J. Berrill The development and growth of Ciona J. Mar. Biol. Assoc. U. K. 26 1947 616 625
    • (1947) J. Mar. Biol. Assoc. U. K. , vol.26 , pp. 616-625
    • Berrill, N.J.1
  • 3
    • 2642571976 scopus 로고    scopus 로고
    • Development of Ciona intestinalis juveniles (through 2nd ascidian stage)
    • S. Chiba, A. Sasaki, A. Nakayama, K. Takamura, and N. Satoh Development of Ciona intestinalis juveniles (through 2nd ascidian stage) Zool. Sci. 21 2004 285 298
    • (2004) Zool. Sci. , vol.21 , pp. 285-298
    • Chiba, S.1    Sasaki, A.2    Nakayama, A.3    Takamura, K.4    Satoh, N.5
  • 5
    • 0031055201 scopus 로고    scopus 로고
    • Characterization of a notochord-specific enhancer from the Brachyury promoter region of the ascidian, Ciona intestinalis
    • J.C. Corbo, M. Levine, and R.W. Zeller Characterization of a notochord-specific enhancer from the Brachyury promoter region of the ascidian, Ciona intestinalis Development 124 1997 589 602
    • (1997) Development , vol.124 , pp. 589-602
    • Corbo, J.C.1    Levine, M.2    Zeller, R.W.3
  • 6
    • 0035823033 scopus 로고    scopus 로고
    • The ascidian as a model organism in developmental and evolutionary biology
    • J.C. Corbo, A. Di Gregorio, and M. Levine The ascidian as a model organism in developmental and evolutionary biology Cell 106 2001 535 538
    • (2001) Cell , vol.106 , pp. 535-538
    • Corbo, J.C.1    Di Gregorio, A.2    Levine, M.3
  • 7
    • 2242464840 scopus 로고    scopus 로고
    • The draft genome of Ciona intestinalis: Insight into chordate and vertebrate origins
    • P. Dehal The draft genome of Ciona intestinalis: insight into chordate and vertebrate origins Science 298 2002 2157 2167
    • (2002) Science , vol.298 , pp. 2157-2167
    • Dehal, P.1
  • 8
    • 0038077268 scopus 로고    scopus 로고
    • Generation of Ci-Brachyury-GFP stable transgenic lines in the ascidian Ciona savignyi
    • K. Deschet, Y. Nakatani, and W.C. Smith Generation of Ci-Brachyury-GFP stable transgenic lines in the ascidian Ciona savignyi Genesis 35 2003 248 259
    • (2003) Genesis , vol.35 , pp. 248-259
    • Deschet, K.1    Nakatani, Y.2    Smith, W.C.3
  • 9
    • 0026410226 scopus 로고
    • Minos, a new transposable element from Drosophila hydei, is a member of the Tc1-like family of transposons
    • G. Franz, and C.C. Savakis Minos, a new transposable element from Drosophila hydei, is a member of the Tc1-like family of transposons Nucleic Acids Res. 19 1991 6646
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6646
    • Franz, G.1    Savakis, C.C.2
  • 10
    • 0037076278 scopus 로고    scopus 로고
    • Genome-wide identification of tissue-specific enhancers in the Ciona tadpole
    • N. Harafuji, D.N. Keys, and M. Levine Genome-wide identification of tissue-specific enhancers in the Ciona tadpole Proc. Natl. Acad. Sci. U. S. A. 99 2002 6802 6805
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 6802-6805
    • Harafuji, N.1    Keys, D.N.2    Levine, M.3
  • 11
    • 0024234855 scopus 로고
    • CLUSTAL: A package for performing multiple sequence alignment on a microcomputer
    • D.G. Higgins, and P.M. Sharp CLUSTAL: a package for performing multiple sequence alignment on a microcomputer Gene 73 1988 237 244
    • (1988) Gene , vol.73 , pp. 237-244
    • Higgins, D.G.1    Sharp, P.M.2
  • 12
  • 14
    • 0034331034 scopus 로고    scopus 로고
    • Genome-wide insertional mutagenesis in human cells by the Drosophila mobile element Minos
    • A.G. Klinakis, L. Zagoraiou, D.K. Vassilatis, and C. Savakis Genome-wide insertional mutagenesis in human cells by the Drosophila mobile element Minos EMBO Rep. 1 2000 416 421
    • (2000) EMBO Rep. , vol.1 , pp. 416-421
    • Klinakis, A.G.1    Zagoraiou, L.2    Vassilatis, D.K.3    Savakis, C.4
  • 15
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • S. Kumar, K. Tamura, I.B. Jakobsen, and M. Nei MEGA2: molecular evolutionary genetics analysis software Bioinformatics 17 2001 1244 1245
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 16
    • 0031833703 scopus 로고    scopus 로고
    • Factors affecting transposition of the Himar1 mariner transposon in vitro
    • D.J. Lampe, T.E. Grant, and H.M. Robertson Factors affecting transposition of the Himar1 mariner transposon in vitro Genetics 149 1998 179 187
    • (1998) Genetics , vol.149 , pp. 179-187
    • Lampe, D.J.1    Grant, T.E.2    Robertson, H.M.3
  • 18
    • 0032519787 scopus 로고    scopus 로고
    • Puckered encodes a phosphatase that mediates a feedback loop regulating JNK activity during dorsal closure in Drosophila
    • E. Martin-Blanco, A. Gampel, J. Ring, K. Virdee, N. Kirov, A.M. Tolkovsky, and A. Martinez-Arias Puckered encodes a phosphatase that mediates a feedback loop regulating JNK activity during dorsal closure in Drosophila Genes Dev. 12 1998 557 570
    • (1998) Genes Dev. , vol.12 , pp. 557-570
    • Martin-Blanco, E.1    Gampel, A.2    Ring, J.3    Virdee, K.4    Kirov, N.5    Tolkovsky, A.M.6    Martinez-Arias, A.7
  • 20
    • 0023202572 scopus 로고
    • Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme: III. Up to the tissue restricted stage
    • H. Nishida Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme: III. Up to the tissue restricted stage Dev. Biol. 121 1987 81 87
    • (1987) Dev. Biol. , vol.121 , pp. 81-87
    • Nishida, H.1
  • 21
    • 0033567355 scopus 로고    scopus 로고
    • Ascidian homologs of mammalian thyroid peroxidase genes are expressed in the thyroid-equivalent region of the endostyle
    • M. Ogasawara, R. Di Lauro, and N. Satoh Ascidian homologs of mammalian thyroid peroxidase genes are expressed in the thyroid-equivalent region of the endostyle J. Exp. Zool. 285 1999 158 169
    • (1999) J. Exp. Zool. , vol.285 , pp. 158-169
    • Ogasawara, M.1    Di Lauro, R.2    Satoh, N.3
  • 23
    • 0000123725 scopus 로고    scopus 로고
    • Enhancer traps
    • D.B. Roberts second ed. Oxford Univ. Press New York
    • C.J. O'Kane Enhancer traps D.B. Roberts Drosophila second ed. 1998 Oxford Univ. Press New York 131 178
    • (1998) Drosophila , pp. 131-178
    • O'Kane, C.J.1
  • 24
    • 0036537894 scopus 로고    scopus 로고
    • Musashi: A translational regulator of cell fate
    • H. Okano, T. Imai, and M. Okabe Musashi: a translational regulator of cell fate J. Cell Sci. 115 2002 1355 1359
    • (2002) J. Cell Sci. , vol.115 , pp. 1355-1359
    • Okano, H.1    Imai, T.2    Okabe, M.3
  • 25
    • 0034674713 scopus 로고    scopus 로고
    • Gene targeting by homologous recombination in Drosophila
    • Y.S. Rong, and K.K. Golic Gene targeting by homologous recombination in Drosophila Science 288 2000 2013 2018
    • (2000) Science , vol.288 , pp. 2013-2018
    • Rong, Y.S.1    Golic, K.K.2
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou, and M. Nei The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol. Biol. Evol. 4 1987 406 425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 27
    • 0035887898 scopus 로고    scopus 로고
    • RNA-binding protein Musashi2: Developmentally regulated expression in neural precursor cells and subpopulations of neurons in mammalian CNS
    • S. Sakakibara, Y. Nakamura, H. Satoh, and H. Okano RNA-binding protein Musashi2: Developmentally regulated expression in neural precursor cells and subpopulations of neurons in mammalian CNS J. Neurosci. 21 2001 8091 8107
    • (2001) J. Neurosci. , vol.21 , pp. 8091-8107
    • Sakakibara, S.1    Nakamura, Y.2    Satoh, H.3    Okano, H.4
  • 28
    • 0037772249 scopus 로고    scopus 로고
    • A genomewide survey of developmentally relevant genes in Ciona intestinalis: VII. Molecules involved in the regulation of cell polarity and actin dynamics
    • Y. Sasakura, L. Yamada, N. Takatori, Y. Satou, and N. Satoh A genomewide survey of developmentally relevant genes in Ciona intestinalis: VII. Molecules involved in the regulation of cell polarity and actin dynamics Dev. Genes Evol. 213 2003 273 283
    • (2003) Dev. Genes Evol. , vol.213 , pp. 273-283
    • Sasakura, Y.1    Yamada, L.2    Takatori, N.3    Satou, Y.4    Satoh, N.5
  • 29
    • 0038303289 scopus 로고    scopus 로고
    • A genomewide survey of developmentally relevant genes in Ciona intestinalis: X. Genes for cell junctions and extracellular matrix
    • Y. Sasakura, E. Shoguchi, N. Takatori, S. Wada, I.A. Meinertzhagen, Y. Satou, and N. Satoh A genomewide survey of developmentally relevant genes in Ciona intestinalis: X. Genes for cell junctions and extracellular matrix Dev. Genes Evol. 213 2003 303 313
    • (2003) Dev. Genes Evol. , vol.213 , pp. 303-313
    • Sasakura, Y.1    Shoguchi, E.2    Takatori, N.3    Wada, S.4    Meinertzhagen, I.A.5    Satou, Y.6    Satoh, N.7
  • 30
    • 0037906102 scopus 로고    scopus 로고
    • Application of Minos, one of the Tc1/mariner superfamily transposable elements, to ascidian embryos as a tool for insertional mutagenesis
    • Y. Sasakura, S. Awazu, S. Chiba, S. Kano, and N. Satoh Application of Minos, one of the Tc1/mariner superfamily transposable elements, to ascidian embryos as a tool for insertional mutagenesis Gene 308 2003 11 20
    • (2003) Gene , vol.308 , pp. 11-20
    • Sasakura, Y.1    Awazu, S.2    Chiba, S.3    Kano, S.4    Satoh, N.5
  • 31
    • 0038610809 scopus 로고    scopus 로고
    • Germ-line transgenesis of the Tc1/mariner superfamily transposon Minos in Ciona intestinalis
    • Y. Sasakura, S. Awazu, S. Chiba, and N. Satoh Germ-line transgenesis of the Tc1/mariner superfamily transposon Minos in Ciona intestinalis Proc. Natl. Acad. Sci. U. S. A. 100 2003 7726 7730
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 7726-7730
    • Sasakura, Y.1    Awazu, S.2    Chiba, S.3    Satoh, N.4
  • 33
    • 0035724599 scopus 로고    scopus 로고
    • Ascidian embryos as a model system to analyze expression and function of developmental genes
    • N. Satoh Ascidian embryos as a model system to analyze expression and function of developmental genes Differentiation 68 2001 1 12
    • (2001) Differentiation , vol.68 , pp. 1-12
    • Satoh, N.1
  • 34
    • 0037379619 scopus 로고    scopus 로고
    • The ascidian tadpole larva: Comparative molecular development and genomics
    • N. Satoh The ascidian tadpole larva: comparative molecular development and genomics Nat. Rev., Genet. 4 2003 285 294
    • (2003) Nat. Rev., Genet. , vol.4 , pp. 285-294
    • Satoh, N.1
  • 35
    • 0037677689 scopus 로고    scopus 로고
    • Ciona intestinalis; An emerging model for whole-genome analyses
    • N. Satoh, Y. Satou, B. Davidson, and M. Levine Ciona intestinalis; an emerging model for whole-genome analyses Trends Genet. 2003 14
    • (2003) Trends Genet. , pp. 14
    • Satoh, N.1    Satou, Y.2    Davidson, B.3    Levine, M.4
  • 36
    • 0034898465 scopus 로고    scopus 로고
    • Action of morpholinos in Ciona embryos
    • Y. Satou, K.S. Imai, and N. Satoh Action of morpholinos in Ciona embryos Genesis 30 2001 103 106
    • (2001) Genesis , vol.30 , pp. 103-106
    • Satou, Y.1    Imai, K.S.2    Satoh, N.3
  • 38
    • 0038150206 scopus 로고    scopus 로고
    • A genomewide survey of developmentally relevant genes in Ciona intestinalis: I. Genes for bHLH transcription factors
    • Y. Satou, K.S. Imai, M. Levine, Y. Kohara, D. Rokhsar, and N. Satoh A genomewide survey of developmentally relevant genes in Ciona intestinalis: I. Genes for bHLH transcription factors Dev. Genes Evol. 213 2003 213 221
    • (2003) Dev. Genes Evol. , vol.213 , pp. 213-221
    • Satou, Y.1    Imai, K.S.2    Levine, M.3    Kohara, Y.4    Rokhsar, D.5    Satoh, N.6
  • 39
    • 0038448995 scopus 로고    scopus 로고
    • A genomewide survey of developmentally relevant genes in Ciona intestinalis: V. Genes for receptor tyrosine kinase pathway and Notch signaling pathway
    • Y. Satou, Y. Sasakura, L. Yamada, K.S. Imai, N. Satoh, and B. Degnan A genomewide survey of developmentally relevant genes in Ciona intestinalis: V. Genes for receptor tyrosine kinase pathway and Notch signaling pathway Dev. Genes Evol. 213 2003 254 263
    • (2003) Dev. Genes Evol. , vol.213 , pp. 254-263
    • Satou, Y.1    Sasakura, Y.2    Yamada, L.3    Imai, K.S.4    Satoh, N.5    Degnan, B.6
  • 40
    • 0037626990 scopus 로고    scopus 로고
    • Large scale EST analyses in Ciona intestinalis. Its application as Northern blot analyses
    • Y. Satou, T. Kawashima, Y. Kohara, and N. Satoh Large scale EST analyses in Ciona intestinalis. Its application as Northern blot analyses Dev. Genes Evol. 213 2003 314 318
    • (2003) Dev. Genes Evol. , vol.213 , pp. 314-318
    • Satou, Y.1    Kawashima, T.2    Kohara, Y.3    Satoh, N.4
  • 42
    • 0037772250 scopus 로고    scopus 로고
    • A genomewide survey of developmentally relevant genes in Ciona intestinalis: IV. Genes for HMG transcription regulators, bZip and GATA/Gli/Zic/Snail
    • L. Yamada, K. Kobayashi, B. Degnan, N. Satoh, and Y. Satou A genomewide survey of developmentally relevant genes in Ciona intestinalis: IV. Genes for HMG transcription regulators, bZip and GATA/Gli/Zic/Snail Dev. Genes Evol. 213 2003 245 253
    • (2003) Dev. Genes Evol. , vol.213 , pp. 245-253
    • Yamada, L.1    Kobayashi, K.2    Degnan, B.3    Satoh, N.4    Satou, Y.5
  • 43
    • 0028361940 scopus 로고
    • An ascidian homolog of the mouse Brachyury (T) gene is expressed exclusively in the notochord cells at the fate restricted stage
    • H. Yasuo, and N. Satoh An ascidian homolog of the mouse Brachyury (T) gene is expressed exclusively in the notochord cells at the fate restricted stage Dev. Growth Differ. 36 1994 9 18
    • (1994) Dev. Growth Differ. , vol.36 , pp. 9-18
    • Yasuo, H.1    Satoh, N.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.