Untangling Physalis (Solanaceae) from the physaloids: A two-gene phylogeny of the physalinae

Systematic Botany

Volumn 30, Issue 1, 2005, Pages 216-230

  Whitson, Maggie ^a,b   Manos, Paul S ^a  

^a DUKE UNIVERSITY   (United States)

^b NORTHERN KENTUCKY UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BRACHISTUS; CHAMAESARACHA; LEUCOPHYSALIS; MAGNOLIOPHYTA; MARGARANTHUS; ORYCTES; PHYSALIS; PHYSALIS ALKEKENGI; PHYSALIS CARPENTERI; QUINCULA; SOLANACEAE; TZELTALIA; WITHERINGIA;

EID: 14244264357     PISSN: 03636445     EISSN: None     Source Type: Journal    
DOI: 10.1600/0363644053661841     Document Type: Article

References (51)

1. AVERETT, J. E. 1970. New combinations in the Solaneae (Solanaceae) and comments regarding the taxonomic status of Leucophysalis. Annals of the Missouri Botanical Garden 57: 380-381.
2. _. 1979. Biosystematics of the physaloid genera of the Solanaceae in North America. Pp. 493-503 in The biology and taxonomy of the Solanaceae, eds. J. G. Hawkes, R. N. Lester, and A. D. Skelding. London: Academic Press.
3. _ and W. G. D'ARCY. 1983. Flavonoids of Oryctes. Phytochemistry 22: 2325-2326.
4. AXELIUS, B. 1992. Testa patterns in some species of Physalis L. and some other genera in the tribe Solaneae (Solanaceae). International Journal of Plant Sciences 153: 488-502.
5. _. 1995. A new combination in Physalis (Solanaceae). Phytologia 79: 10-11.
6. _. 1996. The phylogenetic relationships of the physaloid genera (Solanaceae) based on morphological data. American Journal of Botany 83: 118-124.
7. BALDWIN, B. G. 1992. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae. Molecular Phylogenetics and Evolution 1: 3-16.
8. BARBOZA, G. E. 2000. Rehabilitacion del genero Quincula (Solanaceae: Solaneae). Kurtziana 28: 69-79.
9. BARKER, F. K. and F. M. LUTZONI. 2002. The utility of the incongruence length difference test. Systematic Biology 51: 625-637.
10. BUCKLER, E. S., A. IPPOLITO, and T. P. HOLTSFORD. 1997. The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications. Genetics 145: 821-832.
11. BUCKLEY, T. R., P. ARENSBURGER, C. SIMON, and G. K. CHAMBERS. 2002. Combined data, Bayesian phylogenetics, and the origin of the New Zealand cicada genera. Systematic Biology 51: 4-18.
12. CHIANG, H. C., S. M. JAW, C. F. CHEN, and W. S. KAN. 1992. Antitumor agent, physalin F from Physalis angulata L. Anticancer Research 12: 837-843.
13. D'ARCY, W. G. 1986. The calyx in Lycianthes and some other genera. Annals of the Missouri Botanical Garden 73: 117-127.
14. _ and J. E. AVERETT. 1996. Recognition of tribes Capsiceae and Physaleae, subfamily Solanoideae, Solanaceae. Phytologia 80: 273-275.
15. _, J. L. GENTRY, and J. E. AVERETT. 1981. Recognition of Brachistus (Solanaceae). Annals of the Missouri Botanical Garden 68: 226-227.
16. DARLU, P. and G. LECOINTRE. 2002. When does the incongruence length difference test fail? Molecular Biology and Evolution 19: 432-437.
17. DOYLE, J. J. and J. L. DOYLE. 1987. A rapid DNA isolation for small quantities of fresh tissue. Phytochemical Bulletin 19: 11-15.
18. ESTRADA, E. and M. MARTÍNEZ. 1998. Physalis (Solanaceae) and allied genera: Tzeltalia, a new genus from the highlands of southern Mexico and northwestern Guatemala. Brittonia 50: 285-295.
19. _ and _. 1999. Physalis L. (Solanoideae: Solaneae) and allied genera: I. a morphology-based cladistic analysis. Pp. 139-159 in Solanaceae IV: advances in biology and utilization, eds. M. Nee, D. E. Symon, R. N. Lester, and J. P. Jessop. Kew: Royal Botanic Gardens.
20. GRAHAM, A. 1999. Late Cretaceous and Cenozoic history of North American vegetation north of Mexico. New York: Oxford University Press.
21. FARRIS, J. S., M. KALLERSJO, A. G. KLUGE, and C. BULT. 1995. Testing significance of incongruence. Cladistics 10: 315-319.
22. FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
23. HASEGAWA, M., H. KISHINO, and T. YANO. 1985. Dating of the human-ape split by a molecular clock by mitochondrial DNA. Journal of Molecular Evolution 22: 160-174.
24. HENDRYCH, R. 1989. Physalis alkekengi, in Europa und in der Tschechoslowakei besonders. Acta Universitatis Carolinae. Biologica 33: 1-42.
25. HINTON, W. F. 1975. The systematics of Physalis pumila ssp. hispida (Solanaceae). Systematic Botany 1: 188-193.
26. _. 1976. Natural hybridization and extinction of a population of Physalis virginiana (Solanaceae). American Journal of Botany 62: 198-202.
27. HIPP, A. L, J. C. HALL, and K. J. SYTSMA. 2004. Congruence versus phylogenetic accuracy: revisiting the incongruence length difference test. Systematic Biology 53: 81-89.
28. HUELSENBECK, J. P. and F. RONQUIST. 2001. MrBayes: Bayesian inference of phylogeny. Department of Biology, University of Rochester, Rochester, New York.
29. HUNZIKER, A. T. 1991. Nota preliminar sobre Saracha viscosa (Solanaceae) y su significado taxonómico. Kurtziana 21: 283.
30. _. 2000. Two novelties for the tribe Solaneae (Solanaceae). Kurtziana 28: 65-68.
31. KENNELLY, E. J., C. GERHAEUSER, L. L. SONG, J. G. GRAHAM, C. W. W. BEECHER, J. M. PEZZUTO, and A. D. KINGHORN. 1997. Induction of quinone reductase by withanolides isolated from Physalis philadelphica (tomatillos). Journal of Agricultural and food Chemistry 45: 3771-3777.
32. MARTÍNEZ, M. 1998. Revision of Physalis Section Epeteiorhiza (Solanaceae). Anales del Instituto del Biologia Universidad Nacional Autonoma de Mexico, Serie Botanica 69: 71-117.
33. _. 1999. Infrageneric taxonomy of Physalis. Pp. 275-283 in Solanaceae IV: advances in biology and utilization, eds. M. Nee, D. E. Symon, R. N. Lester and J. P. Jessop. Kew: Royal Botanic Gardens.
34. MENZEL, M. Y. 1950. Cytotaxonomic observations on some genera of the Solanaceae: Margaranthus, Saracha and Quincula. American Journal of Botany 37: 25-30.
35. _. 1951. The cytotaxonomy and genetics of Physalis. Proceedings of the American Philosophical Society 95: 132-183.
36. MILLER, R. E., M. D. RAUSHER, and P. S. MANOS. 1999. Phylogenetic systematics of Ipomoea (Convolvulaceae) based on ITS and waxy sequences. Systematic Botany 24: 209-227.
37. _, T. R. BUCKLEY, and P. S. MANOS. 2002. An examination of the monophyly of morning glory taxa using Bayesian phylogenetic inference. Systematic Biology 51: 740-753.
38. MIONE, T., R. G. OLMSTEAD, R. K. JANSEN, and G. J. ANDERSON. 1994. Systematic implications of chloroplast DNA variation in Jaltomata and selected physaloid genera (Solanaceae). American Journal of Botany 81: 912-918.
39. OLMSTEAD, R. G., J. A. SWEERE, R. E. SPANGLER, L. BOHS, and J. D. PALMER. 1999. Phylogeny and provisional classification of the Solanaceae based on chloroplast data. Pp. 111-137 in Solanaceae IV: advances in biology and utilization, eds. M. Nee, D. E. Symon, R. N. Lester, and J. P. Jessop. Kew: Royal Botanic Gardens.
40. PIETRO, R. C. L. R., S. KASHIMA, D. N. SATO, A. H. JANUARIO, and S. C. FRANCA. 2000. In vitro antimycobacterial activities of Physalis angulata L. Phytomedicine Jena 7: 335-338.
41. POSADA, D. and K. A. CRANDALL. 1998. Modeltest: Testing the model of DNA substitution. Bioinfomatics 14: 817-818.
42. RYDBERG, P. A. 1896. The North American species of Physalis and related genera. Memoirs of the Torrey Botanical Club 4: 297-372.
43. SEITHE, A. and J. R. SULLIVAN. 1990. Hair morphology and systematics of Physalis (Solanaceae). Plant Systematics and Evolution 170: 193-204.
44. SULLIVAN, J. R. 1984. Pollination biology of Physalis viscosa var. cinerascens (Solanaceae). American Journal of Botany 71: 815-820.
45. _. 1985. Systematics of the Physalis viscosa complex (Solanaceae). Systematic Botany 10: 426-444.
46. SWOFFORD, D. L. 2001. PAUP*: Phylogenetic analysis using parsimony (*and other methods), version 4d64. Sunderland: Sinauer Associates.
47. WATERFALL, U. T. 1958. Physalis in Mexico, Central America and the West Indies. Rhodora 69: 82-120 and 203-329.
48. _. 1967. A taxonomic study of the genus Physalis in North America north of Mexico. Rhodora 60: 107-173.
49. WHITE, T. J., T. BRUNS, S. LEE, and J. TAYLOR. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315-322 in PCR protocols: a guide to methods and applications, eds. M. Innis, D. Gelfand, J. Sninsky, and T. White. San Diego: Academic Press.
50. YANG, Z. 1994. Estimating the pattern of nucleotide substitution. Journal of Molecular Evolution 39: 105-111.
51. YODER, A. D., J. A. IRWIN, and B. A. PAYSEUR. 2001. Failure of the ILD to determine data compatibility for slow loris phylogeny. Systematic Biology 50: 408-424.