Structural and dynamic consequences of increasing repeats in a MUC1 peptide tumor antigen

Biopolymers

Volumn 77, Issue 2, 2005, Pages 107-120

  Schuman, Jason T ^a   Grinstead, Jeffrey S ^a   Apostolopoulos, Vasso ^b   Campbell, A Patricia ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

^b AUSTIN RESEARCH INSTITUTE   (Australia)

Author keywords

Cancer vaccine; Dynamics; MUC1; NMR; Structure

Indexed keywords

AMINO ACIDS; ANTIBODIES; ANTIGENS; CELLS; ISOTOPES; NUCLEAR MAGNETIC RESONANCE; PROTEINS; TUMORS;

EXTRACELLULERR DOMAINS; GLYCOSYLATION; PROTEIN EXPRESSIONS; TRANSMEMBRANES;

NITROGEN COMPOUNDS;

CANCER VACCINE; MEMBRANE PROTEIN; MUCIN 1;

AMINO ACID SEQUENCE; ANTIBODY AFFINITY; ANTIGEN BINDING; ANTIGEN STRUCTURE; ARTICLE; BREAST CANCER; CARBON NUCLEAR MAGNETIC RESONANCE; ENZYME LINKED IMMUNOSORBENT ASSAY; GLYCOSYLATION; MOLECULAR CLONING; MOLECULAR DYNAMICS; MOLECULAR MODEL; NONHUMAN; PEPTIDE ANALYSIS; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN STRUCTURE; TANDEM REPEAT;

AMINO ACID SEQUENCE; ANTIBODY SPECIFICITY; BINDING SITES, ANTIBODY; BINDING, COMPETITIVE; CA-15-3 ANTIGEN; CANCER VACCINES; HUMANS; IMMUNODOMINANT EPITOPES; MOLECULAR SEQUENCE DATA; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PROTEIN CONFORMATION; REPETITIVE SEQUENCES, AMINO ACID;

EID: 13944259389     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/bip.20190     Document Type: Article

References (56)

1. Apostolopoulos, V.; Sandrin, M. S.; McKenzie, I. F. C. J Mol Med 1999, 77, 427-436.
2. Taylor-Papadimitriou, J.; Burchell, J.; Miles, D. W.; Dalziel, M. Biochim Biophys Acta 1999, 1455, 301-313.
3. Miles, D. W.; Taylor-Papadimitriou, J. Pharmacol Ther 1999, 82, 97-106.
4. Apostolopoulos, V.; Pietersz, G. A.; McKenzie, I. F. Curr Opin Mol Ther 1999, 1, 98-103.
5. Gendler, S. J. S. Annu Rev Physiol 1995, 57, 607-634.
6. Girling, A.; Bartkova, J.; Burchell, J.; Gendler, S.; Gillett, C.; Taylor-Papadimitriou, J. Int J Cancer 1989, 43, 1072-1076.
7. Burchell, J.; Taylor-Papadimitriou, J.; Boshell, M.; Gendler, S.; Duhig, T. Int J Cancer 1989, 44, 691-696.
8. Xing, P. X.; Prenzoska, J.; McKenzie, I. F. Mol Immunol 1992, 29, 641-650.
9. Denton, G.; Sekowski, M.; Price, M. R. Cancer Lett 1993, 70, 143-150.
10. Kotera, Y.; Fontenot, J. D.; Pecher, G.; Metzgar, R. S.; Finn, O. J. Cancer Res 1994, 54, 2856-2860.
11. Bashford, J. L.; Robins, R. A.; Price, M. R. Int J Cancer 1993, 54, 778-783.
12. Finn, O. J.; Jerome, K. R.; Henderson, R. A.; Pecher, G.; Domenech, N.; Magarian-Blander, J.; Barratt-Boyes, S. M. Immunol Rev 1995, 145, 61-89.
13. Nakamura, H.; Hinoda, Y.; Nakagawa, N.; Makiguchi, Y.; Itoh, F.; Endo, T.; Imai, K. J Gastroenterol 1998, 33, 354-361.
14. Petrarca, C.; Casalino, B.; von Mensdorff-Pouilly, S.; Rughetti, A.; Rahimi, H.; Scambia, G.; Hilgers, J.; Frati, L.; Nuti, M. Cancer Immunol Immunother 1999, 47, 272-277.
15. Apostolopoulos, V.; Pietersz, G. A.; McKenzie, I. F. C. Vaccine 1996, 14, 930-938.
16. Apostolopoulos, V.; Karanikas, V.; Haurum, J. S.; McKenzie, I. F. J Immunol 1997, 159, 5211-5218.
17. Vaughan, H. A.; Ho, D. W. M.; Karanikas, V. A.; Ong, C.-S.; Hwang, L. A.; Pearson, J. M.; McKenzie, I. F. C.; Pietersz, G. A. Vaccine 1999, 17, 2740-2752.
18. Goydos, J. S.; Elder, E.; Whiteside, T. L.; Finn, O. J.; Lotze, M. T. J Surg Res 1996, 63, 298-304.
19. Karanikas, V.; Hwang, L. A.; Pearson, J.; Ong, C. S.; Apostolopoulos, V.; Vaughan, H.; Xing, P. X.; Jamieson, G.; Pietersz, G.; Tait, B.; Broadbent, R.; Thynne, G.; McKenzie, I. F. J Clin Invest 1997, 100, 2783-2792.
20. Karanikas, V.; Patton, K.; Jamieson, G.; Pietersz, G.; McKenzie, I. Tumor Biol 1998, 19, 71-78.
21. Price, M. R.; Rye, P. D.; Petrakou, E.; Murray, A.; Brady, K.; Imai, S.; Haga, S.; Kiyozuka, Y.; Schol, D.; Meulenbroek, M. F.; Snijdewint, F. G.; von Mensdorff-Pouilly, S.; Verstraeten, R. A.; Kenemans, P.; Blockzjil, A.; Nilsson, K.; Nilsson, O.; Reddish, M.; Suresh, M. R.; Koganty, R. R.; Fortier, S.; Baronic, L.; Berg, A.; Longenecker, M. B.; Hilgers, J. et al. Tumor Biol 1998, 19(Suppl 1), 1-20.
22. Fontenot, J. D. Cancer Res 1993, 53, 5386-5394.
23. Grinstead, J. S.; Koganty, R. R.; Krantz, M. J.; Longenecker, B. M.; Campbell, A. P. Biochemistry 2002, 41, 9946-9961.
24. Schuman, J.; Campbell, A. P.; Koganty, R. R.; Longenecker, B. M. J Peptide Res 2002, 61, 91-108.
25. Grinstead, J. S.; Schuman, J. T.; Campbell, A. P. Biochemistry 2003, 42, 14293-14305.
26. Kuliopulos, A.; Walsh, C. T. J Am Chem Soc 1994, 116, 4599-4607.
27. Xing, P. X.; Tjandra J. J.; Stacker S. A.; Teh J. G.; Thompson C. H.; McLaughlin P. J.; McKenzie I. F. Immunol Cell Biol 1989, 67, 183-195.
28. Xing, P. X.; Reynolds, K.; Pietersz, G. A.; McKenzie, I. F. Immunology 1991, 72, 304-311.
29. Xing, P. X.; Prenzoska J.; Quelch K.; McKenzie I. F. Cancer Res 1992, 52, 2310-2317.
30. Zhang, O.; Kay, L. E.; Olivier, J. P.; Forman-Kay, J. D. J Biomol NMR 1994, 4, 845-858.
31. Vuister, G. W.; Bax, A. J Am Chem Soc 1993, 115, 7772-7777.
32. Farrow, N. A.; Muhandiram, R.; Singer, A. U.; Pascal, S. M.; Kay, C. M.; Gish, G.; Shoelson, S. E.; Pawson, T.; Forman-Kay, J. D.; Kay, L. E. Biochemistry 1994, 33, 5984-6003.
33. Yamakazi, T.; Muhandiram, R.; Kay, L. E. J Am Chem Soc 1994, 116, 8266-8278.
34. Delaglio, F.; Grzesiek, S.; Vuister, G. W.; Zhu, G.; Pfeifer, J.; Bax, A. J Biomol NMR 1995, 6, 277-293.
35. Kraulis, P. J. J Magn Reson 1989, 84, 627-633.
36. Volkman, B. F.; Alam, S. L.; Satterlee, J. D.; Markley, J. L. Biochemistry 1998, 37, 10906-10919.
37. Zhang, P.; Dayie, K. T.; Wagner, G. J Mol Biol 1997, 272, 443-455.
38. Peng, J. W.; Wagner, G. J Magn Reson 1992, 98, 308-332.
39. Farrow, N. A.; Zhang, O.; Szabo, A.; Torchia, D. A.; Kay, L. E. J Biomol NMR 1995, 6, 153-162.
40. Harris, L. J.; Skaletsky, E.; McPherson, A. J Mol Biol 1998, 275, 861-872.
41. Wüthrich, K. NMR of Proteins and Nucleic Acids; John Wiley and Sons: New York, 1986.
42. Scanlon, M. J.; Morley, S. D.; Jackson, D. E.; Price, M. R.; Tendler, S. J. B. Biochem J 1992, 284, 137-144.
43. Liu, X.; Sejbal, J.; Kotovych, G.; Koganty, R.; Reddish, M. A.; Jackson, L.; Gandhi, S. S.; Mendoca, A. J.; Longenecker, B. M. Glycoconjugate J 1995, 12, 607-617.
44. Fontenot, J. D.; Finn, O. J.; Dales, N.; Andrews, P. C.; Montelaro, R. C. Peptide Res 1993, 6, 330-336.
45. Fontenot, J. D.; Mariappan, S. V.; Catasti, P.; Domenech, N.; Finn, O. J.; Gupta, G. J Biomol Struct Dyn 1995, 13, 245-260.
46. Tendler, S. J. Biochem J, 1990, 267, 733-777.
47. Price M. R.; Hudecz F.; O'Sullivan C.; Baldwin R. W.; Edwards P. M.; Tendler S. J. Mol Immunol 1990, 27, 795-802.
48. Rose, G. D.; Gierasch, L. M.; Smith, J. A. Adv Protein Chem 1985, 37, 1-109.
49. Lipari, G.; Szabo, A. J Am Chem Soc 1982, 104, 4546-4559.
50. Lipari, G.; Szabo, A. J Am Chem Soc 1982, 104, 4559-4570.
51. Peng, J. W.; Wagner, G. Biochemistry 1992, 31, 8571-8586.
52. Bhattacharya, S.; Botuyan, M. V.; Hsu, F.; Shan, X.; Arunkumar, A. I.; Arrowsmith, C. H.; Edwards, A. M.; Chazin, W. J. Protein Sci 2002, 11, 2316-2325.
53. Gion, M.; Mione, R.; Leon, A. E.; Luftner, D.; Molina, R.; Possinger, K.; Robertson, J. F. Eur J Cancer 2001, 37, 355-363.
54. Page, M. I.; Jencks, W. P. Proc Natl Acad Sci U S A 1971, 68, 1678-1683.
55. Loidl, G.; Groll, M.; Musiol, H. J.; Huber, R.; Moroder, L. Proc Natl Acad Sci U S A 1999, 96, 5418-5422.
56. Zhang, Z.; Merritt, E. A.; Ahn, M.; Roach, C.; Hou, Z.; Verlinde, C. L.; Hol, W. G.; Fan E. J Am Chem Soc 2002, 124, 12991-12998.