Morphological and molecular characterization of the sudden-death syndrome pathogen of soybean in Brazil

Plant Pathology

Volumn 54, Issue 1, 2005, Pages 53-65

  Arruda, G M T ^a   Miller, R N G ^b   Ferreira, M A S V ^a   Cafe Filho A C ^a  

^a UNIVERSITY OF BRASILIA   (Brazil)

^b UNIVERSIDADE CATÓLICA DE BRASÍLIA   (Brazil)

Author keywords

Fusarium oxysporum; Glycine max; Mitochondrial SSU rDNA; Nuclear rDNA; Soybean root rot

Indexed keywords

FUNGAL DISEASE; MOLECULAR ANALYSIS; MORPHOLOGY; SOYBEAN;

BRAZIL; SOUTH AMERICA; WESTERN HEMISPHERE; WORLD;

FUSARIUM; FUSARIUM OXYSPORUM; FUSARIUM SOLANI; FUSARIUM TUCUMANIAE; FUSARIUM VIRGULIFORME; GLYCINE MAX;

EID: 13844296835     PISSN: 00320862     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-3059.2005.01116.x     Document Type: Article

References (53)

1. Achenbach LA, Patrick J, Gray L, 1996. Use of RAPD markers as a diagnostic tool for the identification of Fusarium solani isolates that cause soybean sudden death syndrome. Plant Disease 80, 1228-32.
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, 1990. Basic local alignment search tool. Journal of Molecular Biology 215, 403-10.
3. Anderson TR, Tenuta AU, 1998. First report of Fusarium solani f.sp. glycines causing sudden death syndrome of soybean in Canada. Plant Disease 82, 448.
4. Andrivon D, 1993. Nomenclature for pathogenicity and virulence: the need for precision. Phytopathology 83, 889-90.
5. Antoniolli ZI, Schchtman DP, Ophel-Keller K, Smith SE, 2000. Variation in rDNA sequences in Glomus mosseae and Gigaspora margarita spores from a permanent pasture. Mycological Research 104, 708-15.
6. Aoki T, O'Donnell K, Homma Y, Lattanzi AR, 2003. Sudden-death syndrome of soybean is caused by two morphologically and phylogenetically distinct species within the Fusarium solani species complex - F. virguliforme in North America and F. tucumaniae in South America. Mycologia 95, 660-84.
7. Botta G, Ivancovich A, Annone J, 1993. Respuesta de Cultivares al Sindromo de la Muerte Repentina de la Soja. Carpeta de Produccion Vegetal Tomo XII, Soja. Informacion no. 113. Argentina: EEA-INTA Pergamino.
8. Cho JH, Rupe JC, Cummings MS, Gbur EE Jr, 2001. Isolation and identification of Fusarium solani f.sp. glycines from soil on modified Nash and Snyder's medium. Plant Disease 85, 256-60.
9. Clamp M, Cuff J, Searle SM, Barton GJ, 2004. The JALVIEW java alignments editor. Bioinformatics 20, 426-7.
10. Ewing B, Hillier D, Wendl MC, Green P, 1998. Base-calling of automated sequencer traces using PHRED. I. Accuracy assessment. Genome Research 8, 175-85.
11. Freitas MA, Café Filho AC, Nasser LCB, 1997. Redução da produção de soja (Glycine max L. Merrill) com sintoma 'carijó' associado à podridão radicular causada por Fusarium solani f.sp. glycines. Fitopatologia Brasileira 22 (Suppl.), 264.
12. Gray LE, 1991. Alternate hosts of soybean SDS strains of Fusarium solani. Phytopathology 81 (Suppl.), 1135.
13. Hartman GL, Sinclair JB, Rupe JC, 1999. Compendium of Soybean Diseases. St Paul, MN, USA: American Phytopathological Society Press.
14. Hildebrand AA, 1953. An elaboration of the toothpick method of inoculating plants. Canadian Journal of Agricultural Science 33, 506-8.
15. Hirrel MC, 1983. Sudden death syndrome of soybean - a disease of unknown etiology. Phytopathology 77 (Suppl.), 1689.
16. Huang X, Madan A, 1999. CAP3: a DNA sequence assembly program. Genome Research 9, 868-77.
17. Ivancovich A, Botta G, Annone J, 1992. Sindrome de la Muerte Repentina en Cultivos de Soja en el Area de la EEA Pergamino. Carpeta de Produccion Vegetal. Tomo XI, Soja. Informacion no. 94. Argentina: EEA-INTA Pergamino.
18. Killebrew JF, Roy KW, Lawrence GW, Mclean KS, Hodges HH, 1988. Greenhouse evaluation of Fusarium solani pathogenicity to soybean seedlings. Plant Disease 72, 1067-70.
19. Kumar S, Tamura K, Jakobsen IB, Nei M, 2001. MEGA2: Molecular Evolutionary Genetics Analysis Software. Tempe, AZ, USA: Arizona State University.
20. Leão RZR, Freitas MA, Café Filho AC, 1998. Reação de cultivares de soja à inoculação com isolados de diferentes espécies e formae speciales de Fusarium. Summa Phytopathologica 24, 261-4.
21. Li S, Hartman GL, 2003. Molecular detection of Fusarium solani f.sp. glycines in soybean roots and soil. Plant Pathology 52, 74-83.
22. Li K-N, Rouse DI, German TL, 1994. PCR primers that allow intergenic differentiation of ascomycetes and their application to Verticillium spp. Applied and Environmental Microbiology 60, 4324-31.
23. Li S, Hartman GL, Gray LE, 1998. Chlamydospore formation, production, and nuclear status in Fusarium solani f.sp. glycines soybean sudden death syndrome-causing isolates. Mycologia 90, 414-21.
24. Li S, Tam YK, Hartman GL, 2000. Molecular differentiation of Fusarium solani f.sp. glycines from other F. solani based on mitochondrial small subunit rDNA sequences. Phytopathology 90, 491-7.
25. Melgar J, Roy KW, 1994. Soybean sudden death syndrome: cultivar reactions to inoculation in a controlled environment and host range and virulence of the causal agent. Plant Disease 78, 265-8.
26. Meneghetti RC, Freitas TMQ, Balardin RS, 2001. Perdas devido à podridão vermelha da raiz na cultura da soja. Fitopatologia Brasileira 26 (Suppl.), 421.
27. Moricca S, Ragazzi A, 1998. Use of RFLP and SSCP analyses to differentiate the pine rusts Cronartium flaccidum and Peridermium pini. Mycological Research 102, 666-70.
28. Nakajima T, Mitsueda T, Charchar MJD, 1993. Occurrence of soybean sudden death syndrome caused by Fusarium solani in Brazil. In: Nelson PE, ed. Seventh International Fusarium Workshop. University Park, PA, USA: Pennsylvania State University Press, 79.
29. Nakajima T, Mitsueda T, Charchar MJD, 1996. First occurrence of sudden death syndrome of soybean in Brazil. Japanese Agricultural Research Quarterly 30, 31-4.
30. Nei M, Li WH, 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences, USA 76, 5269-73.
31. Nelson PE, Tousson TA, Marasas WFO, 1983. Fusarium Species, an Illustrated Manual for Identification. University Park, PA, USA: Pennsylvania State University Press.
32. O'Donnell K, 2000. Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex. Mycologia 92, 919-38.
33. O'Donnell K, Gray LE, 1995. Phylogenetic relationships of the soybean sudden-death syndrome pathogen Fusarium solani f.sp. phaseoli inferred from rDNA sequence data and PCR primers for its identification. Molecular Plant-Microbe Interactions 8, 709-16.
34. Ploper D, 1993. Sindrome de la muerte subita: nueva enfermedad de la soja en el noroeste argentine. Avance Agroindustrial, Ano 13, 5-9.
35. Raeder U, Broda P, 1985. Rapid preparation of DNA from filamentous fungi. Letters in Applied Microbiology 1, 17-20.
36. Roy KW, 1997a. Fusarium solani on soybean roots: nomenclature of the causal agent of sudden death syndrome and identity and relevance of F. solani form B. Plant Disease 81, 259-66.
37. Roy KW, 1997b. Sporulation of Fusarium solani glycines, causal agent of sudden death syndrome, on soybeans in the Midwestern and Southern United States. Plant Disease 81, 566-9.
38. Roy KW, Lawrence GW, Hodges HH, McLean KS, Killebrew JF, 1989. Sudden death syndrome of soybean: Fusarium solani as incitant and relation of Heterodera glycines to disease severity. Phytopathology 79, 191-7.
39. Roy KW, Rupe JC, Herdhman DE, Abney TS, 1997. Sudden death syndrome of soybean. Plant Disease 81, 1100-11.
40. Rupe JC, 1987. Occurrence and pathogenicity of Fusarium solani recovered from soybeans with sudden death syndrome. Phytopathology 77 (Suppl.), 1689.
41. Rupe JC, 1989. Frequency and pathogenicity of Fusarium solani recovered from soybeans with sudden death syndrome. Plant Disease 73, 581-4.
42. Rupe JC, 1999. Epidemiology of sudden death syndrome of soybean. Congresso Brasileiro de Soja. Londrina. Brazil: EMBRAPA, 139-48.
43. Rupe JC, Weidemann GJ, 1986. Pathogenicity of a Fusarium sp. isolated from soybean plants with sudden death syndrome. Phytopathology 76 (Suppl.), 1080.
44. Rupe JC, Correl JC, Yount P, 1993. Differentiation of sudden death syndrome pathogen, Fusarium solani, from other isolates of F. solani based on cultural morphology and mitochondrial DNA RFLPs. Phytopathology 83 (Suppl.), 1423.
45. Rupe JC, Correl JC, Guerber JC, Becton CM, Gbur EE Jr, Cummings MS, Yount PA, 2001. Differentiation of sudden death syndrome pathogen of soybean, Fusarium solani f.sp. glycines, from other isolates of F. solani based on cultural morphology, pathogenicity, and mitochondrial DNA restriction fragment length polymorphisms. Canadian Journal of Botany 79, 829-35.
46. Sanger F, Nicklen S, Coulson AR, 1977. DNA sequencing with chain termination inhibitors. Proceedings of the National Academy of Sciences, USA 74, 5463-7.
47. Sneath PHA, Sokal RR, 1973. Numerical Taxonomy. San Francisco, CA, USA: W.H. Freeman.
48. Teixeira AB, Freitas MA, Ananias-Filho N, Café-Filho AC, 1998. Constatação de Fusarium solani f.sp. glycines (síndrome da morte súbita) em áreas de Goiás, Distrito Federal e Minas Gerais. Fitopatologia Brasileira 23, 286 (abstract).
49. Thompson JD, Higgins DG, Gibson TJ, 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-80.
50. White TJ, Bruns T, Lee S, Taylor JW, 1990. Amplification and direct sequencing of fungal RNA genes for phylogenetics. In: Innis MA, Gelgard DH, Sninsky JJ, White TJ, eds. PCR Protocols: A Guide to Methods and Applications. New York, NY, USA: Academic Press, 315-22.
51. Wrather JA, Kending SR, Anand SC, Niblack TL, Smith GS, 1995. Effects of tillage, cultivar and planting date on percentage of soybean leaves with symptoms of sudden death syndrome. Plant Disease 79, 560-2.
52. Wrather JA, Anderson TR, Arsyad DM, Gai J, Ploper LD, Porta-Puglia A, Ram HH, Yorinori JT, 1997. Soybean disease loss estimates for the top 10 producing countries in 1994. Plant Disease 81, 107-10.
53. Yorinori JT, Charchar MJA, Nasser LCB, Henning AA, 1993. Doenças da soja e seu controle. In: Arantes NE, Souza PIM, eds. Cultura da Soja nos Cerrados. Piracicaba, SP, Brazil: POTAFOS, 333-97.