Variation in rDNA ITS sequences in Glomus mosseae and Gigaspora margarita spores from a permanent pasture

Mycological Research

Volumn 104, Issue 6, 2000, Pages 708-715

  Antoniolli, Z I ^a   Schachtman, D P ^b   Ophel Keller, K ^c   Smith, S E ^a  

^a UNIVERSITY OF ADELAIDE   (Australia)

^b CSIRO   (Australia)

^c Government of South Australia   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL SPORE; GENETIC DIVERSITY; GENETIC VARIANCE; INTERNAL TRANSCRIBED SPACER; MORPHOLOGY; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIMER DNA; RIBOSOMAL DNA;

FUNGUS; GENETIC VARIATION; POLYMERASE CHAIN REACTION;

BACTERIA (MICROORGANISMS); FUNGI; GIGASPORA MARGARITA; GLOMUS MOSSEAE; MARGARITES; MYXOGASTRIA;

EID: 0033921620     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756299001860     Document Type: Article

References (39)

1. Altschul, P., Stephen, F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990) Basic local alignment search tool. Journal of Molecular Biology 215: 403-410.
2. Bago, B., Bentivenga, S., Brenac, V., Dodd, J., Piche, Y. & Simon, L. (1998) Molecular analysis of Gigaspora (Glomaks, Gigasporaceae). New Phytologist 139: 581-588.
3. Bentivenga, S. P. & Morton, J. B. (1994) Stability and heritability of fatty acid methyl ester profiles of glomalean endomycorrhizal fungi. Mycological Research 98: 1419-1426.
4. Blaszkowski, J. (1994) First record and notes on Glomus coronatum in Poland and Germany. Mycologia 86: 630-634.
5. Chen, W. (1992) Restriction fragment length polymorphisms in enzymatically amplified ribosomal DNAs of three heterothallic Pythium species. Phytopathology 82: 1467-1472.
6. Clapp, J. P., Young, J. P. W., Merryweather, J. & Fitter, A. H. (1995) Diversity of fungal symbionts in arbuscular mycorrhizas from a natural community. New Phytologist 130: 259-265.
7. Dodd, J., Rosendahl, S., Giovannetti, M., Broome, A., Lanfranco, L. & Walker, C. (1996) Inter- and intraspecific variation within the morphologically -similar arbuscular mycorrhizal fungi Glomus mossene and Glomus coronatum. New Phytologist 133: 113-122.
8. Erland, S., Henrion, B., Martin, F., Glover, L. A. & Alexander, I. J. (1994) Identification of the ectomycorrhizal basidiomycete Tylospora fibrillosa Donk by RFLP analysis of the PCR-amplified ITS and IGS regions of ribosomal DNA. New Phytologist 126: 525-532.
9. Franken, P. & Gianinazzi-Pearson, V. (1996) Construction of genomic phage libraries of the arbuscular mycorrhizal fungi Glomus mosseae and Scutellspora castanea and isolation of ribosomal RNA genes. Mycorrhiza 6: 167-173.
10. Gadkar, V., Adholeya, A. & Satyanarayana, T. (1997) Randomly amplified polymorphic DNA using the M13 core sequence of the vesicular-arbuscular mycorrhizal fungi Gigaspora margarita and Gigaspora gigantea. Canadian Journal of Microbiology 43: 795-798.
11. Giovannetti, M. & Gianinazzi-Pearson, V. (1994) Biodiversity in arbuscular mycorrhizal fungi. Mycological Research 98: 705-715.
12. Grace, P. R., Oades, J. M., Keith, H. & Hancock, T. W. (1995) Trends in wheat yields and soil organic carbon in the permanent rotation trial at the Waite Agricultural Research Institute, South Australia. Australian Journal of Experimental Agriculture 35: 857-864.
13. Helgason, T., Daniel, T., Husband, R., Fitter, A. & Young, J. (1998) Ploughing up the wood-wide web? Nature 394: 431.
14. Henrion, B., Le Tacon, F. & Martin, F. (1992) Rapid identification of genetic variation of ectomycorrhizal fungi by amplification of ribosomal RNA genes. New Phytologist 122: 289-298.
15. Hoelzel, A. & Dover, G. (1991) Molecular Genetic Ecology. IRL Press, Oxford.
16. Jabaji-Hare, S. (1988) Lipid and fatty acid profiles of some vesicular-arbuscular mycorrhizal fungi: contribution to taxonomy. Mycologia 80: 622-629.
17. Lanfranco, L., Wyss, P., Marzachi, C. & Bonfante, P. (1995) Generation of RAPD-PCR primers for the identification of isolates of Glomus mosseae, an arbuscular mycorrhizal fungus. Molecular Ecology 80: 622-629.
18. Lloyd-Macgilp, S., Chambers, S., Dodd, J., Fitter, A., Walker, C. & Young, J. (1996) Diversity of the ribosomal internal transcribed spacers within and among isolates of Glomus mosseae and related mycorrhizal fungi. New Phytologist 133: 103-111.
19. Martin, F., Delaruelle, C. & Ivory, M. (1998) Genetic variability in intergenic spacers of ribosomal DNA in Pisolithus isolates associated with pine, eucalyptus and Afzelia in lowland Kenyan forests. New Phytologist 133: 103-111.
20. Meier, R. & Charvat, I. (1992) Peridial development in Glomus mosseae (Ghmaceae). American Journal of Botany 79: 928-936.
21. Morton, J. B., Franke, M. & Bentivenga, S. P. (1995a) Developmental foundations for morphological diversity among endomycorrhizal fungi in Glomales (Zygomycetes). In Mycorrhiza (A. Varma & B. Hock, ed.): 669-683. Springer-Verlag, Berlin.
22. Morton, A., Carder, J. H. & Barbara, D. J. (1995b). Sequences of the genetic variation spacers of ectomycorrhizal fungi by amplification of ribosomal RNA genes. New Phytologist 44: 183-190.
23. Redecker D., Thierfelder, H., Walker, C. & Werner, D. (1997) Restriction analysis of PCR-amplified internal transcribed spacers of ribosomal DNA as a tool for species identification in different genera of the order Glomales. Applied and Environmental Microbiology 63: 1756-1761.
24. Rosendahl, S. (1989) Comparisons of spore-cluster forming Glomus species (Endogonaceae) based on morphological characteristics and isoenzyme banding patterns. Opera Botanica 100: 215-223.
25. Samuels, G. J. & Seifert, K. A. (1995) The impact of molecular characters on systematics of filamentous ascomycetes. Annual Review of Phytopathology 33: 37-67.
26. Sanders, I. R., Alt, M., Groppe, K., Boller, T. & Wiemken, A. (1995) Identification of ribosomal DNA polymorphisms among and within spores of the Glomales - application to studies on the genetic diversity of arbuscular mycorrhizal fungal communities. New Phytologist 130: 419-427.
27. Sanders, I. R., Clapp, J. & Wiemken, A. (1996) The genetic diversity of arbuscular mycorrhizal fungi in natural ecosystems - a key to understanding the ecology and functioning of the mycorrhizal symbiosis. New Phytologist 133: 123-134.
28. Schenck, N. C. (1982) Methods and Principles of Mycorrhizal Research. American Phytopathological Society, St Paul, Minnesota.
29. Schenck, N. C. & Pérez, Y. (1990) Manual for the Identification of VA Mycorrhizal Fungi. Synergistic Publications, Gainesville.
30. Simon, L., Lalonde, M. & Bruns, T. D. (1992) Specific amplification of 18S fungal ribosomal genes from vesicular-arbsucular endomycorrhizal fungi colonizing roots. Applied and Environmental Microbiology 58: 291-295.
31. Simon, L., Levesque, R. C. & Lalonde, M. (1993) Identification of endomycorrhizal fungi colonizing roots by fluorescent single-strand conformation polymorphism-polymerase chain reaction. Applied and Environmental Microbiology 59: 4211-4215.
32. Smith, S. E. & Read, D. J. (1997) Mycorrhizal Symbiosis. Academic Press, London.
33. Tommerup, I. C. (1983) Spore dormancy in vesicular-arbuscular mycorrhizal fungi. Transactions of the British Mycological Society 81: 37-45.
34. Vandenkoornhuyse, P. & Leyval, C. (1998) SSU rDNA sequencing and PCR-fingerprinting reveal genetic variation within Glomus mosseae. Mycologia 90: 791-797.
35. Walker, C. (1992) Systematic and taxonomy of the arbuscular endomycorrhizal fungi (Glomales) - a possible way forward. Agronomie 12: 887-897.
36. Walker, C. & Trappe, J. M. (1993) Names and epithets in the Glomales and Endogonales. Mycological Research 97: 339-344.
37. White, T., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols - A Guide To Methods And Applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White, eds), 315-322. Academic Press, New York.
38. Wright S., Morton, J. & Sworobuk, J. (1987) Identification of a vesiculararbuscular mycorrhizal fungus by using monoclonal antibodies in an enzyme-linked immunosorbent assay. Applied and Environmental Microbiology 53: 2222-2225.
39. Zézé, A., Sulistyowati, E., Ophel-Keller, K., Barker, S. & Smith, S. E. (1997) Intrasporal genetic variation of Gigaspora margarita, a vesicular arbuscular mycorrhizal fungus, revealed by M13 minisatellite primed-PCR. Applied and Environmental Microbiology 63: 676-678.