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Volumn 26, Issue 4, 2004, Pages 387-395

Molecular cloning of the translation elongation factor 1A (eEF1A) gene from the soft coral, Scleronephthya gracillimum (Kükenthal) and implication on cnidarian phylogeny

Author keywords

Anthozoa; cDNA; Cnidaria; eEF1A; Phylogeny; Scleronephthya gracillimum

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; ELONGATION FACTOR 1ALPHA;

EID: 13444311767     PISSN: 02545934     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (1)

References (38)
  • 2
    • 0036438894 scopus 로고    scopus 로고
    • Regulation of peptide-chain elongation in mammalian cells
    • Browne GJ and Proud CG (2002) Regulation of peptide-chain elongation in mammalian cells. Eur. J. Biochem. 269: 5360-5368.
    • (2002) Eur. J. Biochem. , vol.269 , pp. 5360-5368
    • Browne, G.J.1    Proud, C.G.2
  • 4
    • 0024559666 scopus 로고
    • Phylogenetic conservation of antigenic determinants in archaebacterial elongation factors (Tu proteins)
    • Cammarano P, Tiboni, O and Sanangelantoni AM (1989) Phylogenetic conservation of antigenic determinants in archaebacterial elongation factors (Tu proteins). Can. J. Microbiol. 35: 2-10.
    • (1989) Can. J. Microbiol. , vol.35 , pp. 2-10
    • Cammarano, P.1    Tiboni, O.2    Sanangelantoni, A.M.3
  • 5
    • 0027406211 scopus 로고
    • Characterization of yeast EF-1α: Non-conservation of post-translational modifications
    • Cavallius J, Zoll W, Chakraburtty K and Merrick WC (1993) Characterization of yeast EF-1α: non-conservation of post-translational modifications. Biochim. Biophys. Acta. 1163: 75-80.
    • (1993) Biochim. Biophys. Acta , vol.1163 , pp. 75-80
    • Cavallius, J.1    Zoll, W.2    Chakraburtty, K.3    Merrick, W.C.4
  • 6
    • 0029027331 scopus 로고
    • A highly conserved nuclear gene for low-level phylogenetics: Elongation factor-1α recovers morphology-based tree for heliothine moths
    • Cho S, Mitchell A, Regier JC, Mitter,C, Poole RW, Friedlander TP and Zhao S (1995) A highly conserved nuclear gene for low-level phylogenetics: elongation factor-1α recovers morphology-based tree for heliothine moths. Mol. Biol. Evol. 12: 650-656.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 650-656
    • Cho, S.1    Mitchell, A.2    Regier, J.C.3    Mitter, C.4    Poole, R.W.5    Friedlander, T.P.6    Zhao, S.7
  • 7
    • 0025840357 scopus 로고
    • Nucleotide sequence of a DNA region comprising the gene for elongation factor 1α (EF-1α) from the ultrathermophilic archaeote Pyrococcus woesei: Phylogenetic implications
    • Creti R, Citarella F, Tiboni O, Sanangelantoni A, Palm P and Cammarano P (1991) Nucleotide sequence of a DNA region comprising the gene for elongation factor 1α (EF-1α) from the ultrathermophilic archaeote Pyrococcus woesei: phylogenetic implications. J. Mol. Evol. 33: 332-342.
    • (1991) J. Mol. Evol. , vol.33 , pp. 332-342
    • Creti, R.1    Citarella, F.2    Tiboni, O.3    Sanangelantoni, A.4    Palm, P.5    Cammarano, P.6
  • 8
    • 0034777297 scopus 로고    scopus 로고
    • Phylogenetic analysis of partial sequences of elongation factor 1α identifies major groups of lice (Insecta: Phthiraptera)
    • Cruickshank RH, Johnson KP, Smith VS, Adams RJ, Clayton DH and Page RD (2001) Phylogenetic analysis of partial sequences of elongation factor 1α identifies major groups of lice (Insecta: Phthiraptera). Mol. Phylogenet. Evol. 19: 202-215.
    • (2001) Mol. Phylogenet. Evol. , vol.19 , pp. 202-215
    • Cruickshank, R.H.1    Johnson, K.P.2    Smith, V.S.3    Adams, R.J.4    Clayton, D.H.5    Page, R.D.6
  • 9
    • 0033694204 scopus 로고    scopus 로고
    • Phylogeny of the treehoppers (Insecta: Hemiptera: Membracidae): Evidence from two nuclear genes
    • Cryan JR, Wiegmann BM, Deitz LL and Dietrich CH (2000) Phylogeny of the treehoppers (Insecta: Hemiptera: Membracidae): evidence from two nuclear genes. Mol. Phylogenet. Evol. 17: 317-334.
    • (2000) Mol. Phylogenet. Evol. , vol.17 , pp. 317-334
    • Cryan, J.R.1    Wiegmann, B.M.2    Deitz, L.L.3    Dietrich, C.H.4
  • 10
    • 0032539680 scopus 로고    scopus 로고
    • RNA polymerase of vesicular stomatitis virus specifically associates with translation elongation factor-1αβγ for its activity
    • Das T, Mathur M, Gupta AK, Janssen GM and Banerjee AK (1998) RNA polymerase of vesicular stomatitis virus specifically associates with translation elongation factor-1αβγ for its activity. Proc. Natl. Acad. Sci. 95: 1449-1454.
    • (1998) Proc. Natl. Acad. Sci. , vol.95 , pp. 1449-1454
    • Das, T.1    Mathur, M.2    Gupta, A.K.3    Janssen, G.M.4    Banerjee, A.K.5
  • 11
    • 0028136693 scopus 로고
    • Protein synthesis elongation factor EF-1α is essential for ubiquitin-dependent degradation of certain N alpha-acetylated proteins and may be substituted for by the bacterial elongation factor EF-Tu
    • Gonen H, Smith CE, Siegel NR, Kahana C, Merrick WC, Chakraburtty K, Schwartz AL and Ciechanover A (1994) Protein synthesis elongation factor EF-1α is essential for ubiquitin-dependent degradation of certain N alpha-acetylated proteins and may be substituted for by the bacterial elongation factor EF-Tu. Proc. Natl. Acad. Sci. 91: 7648-7652.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 7648-7652
    • Gonen, H.1    Smith, C.E.2    Siegel, N.R.3    Kahana, C.4    Merrick, W.C.5    Chakraburtty, K.6    Schwartz, A.L.7    Ciechanover, A.8
  • 12
    • 13444309989 scopus 로고    scopus 로고
    • Identification and characterization of Drosophila EF-1a protein
    • Han C-T (1996) Identification and characterization of Drosophila EF-1a protein. Korean J. Genetics 18: 56-65.
    • (1996) Korean J. Genetics , vol.18 , pp. 56-65
    • Han, C.-T.1
  • 13
    • 0027466539 scopus 로고
    • Early branchings in the evolution of eukaryotes: Ancient divergence of entamoeba that lacks mitochondria revealed by protein sequence data
    • Hasegawa M, Hashimoto T, Adachi J, Iwabe N and Miyata T (1993) Early branchings in the evolution of eukaryotes: ancient divergence of entamoeba that lacks mitochondria revealed by protein sequence data. J. Mol. Evol. 36: 380-388.
    • (1993) J. Mol. Evol. , vol.36 , pp. 380-388
    • Hasegawa, M.1    Hashimoto, T.2    Adachi, J.3    Iwabe, N.4    Miyata, T.5
  • 14
    • 0029976676 scopus 로고    scopus 로고
    • Origin and early evolution of eukaryotes inferred from the amino acid sequences of translation elongation factors 1α/Tu and 2/G
    • Hashimoto T and Hasegawa M (1996) Origin and early evolution of eukaryotes inferred from the amino acid sequences of translation elongation factors 1α/Tu and 2/G. Adv. Biophys. 32: 73-120.
    • (1996) Adv. Biophys. , vol.32 , pp. 73-120
    • Hashimoto, T.1    Hasegawa, M.2
  • 15
    • 0028153888 scopus 로고
    • Protein phylogeny gives a robust estimation for early divergences of eukaryotes: Phylogenetic place of a mitochondria-lacking protozoan, Giardia lamblia
    • Hashimoto T, Nakamura Y, Nakamura F, Shirakura T, Adachi J, Goto N, Okamoto K and Hasegawa M (1994) Protein phylogeny gives a robust estimation for early divergences of eukaryotes: phylogenetic place of a mitochondria-lacking protozoan, Giardia lamblia. Mol. Biol. Evol. 11: 65-71.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 65-71
    • Hashimoto, T.1    Nakamura, Y.2    Nakamura, F.3    Shirakura, T.4    Adachi, J.5    Goto, N.6    Okamoto, K.7    Hasegawa, M.8
  • 16
    • 0345602131 scopus 로고    scopus 로고
    • Phylogeny of the Glomerales and Diversisporales (fungi: Glomeromycota) from actin and elongation factor 1-α sequences
    • Helgason T, Watson IJ and Young JP (2003) Phylogeny of the Glomerales and Diversisporales (fungi: Glomeromycota) from actin and elongation factor 1-α sequences. FEMS Microbiol. Lett. 229: 127-132.
    • (2003) FEMS Microbiol. Lett. , vol.229 , pp. 127-132
    • Helgason, T.1    Watson, I.J.2    Young, J.P.3
  • 17
    • 0242317676 scopus 로고    scopus 로고
    • Assessing functional divergence in EF-1α and its paralogs in eukaryotes and archaebacteria
    • Inagaki Y, Blouin C, Susko E and Roger AJ (2003) Assessing functional divergence in EF-1α and its paralogs in eukaryotes and archaebacteria. Nucleic Acids Res. 31: 4227-4237.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 4227-4237
    • Inagaki, Y.1    Blouin, C.2    Susko, E.3    Roger, A.J.4
  • 18
    • 0033064715 scopus 로고    scopus 로고
    • A new perspective on lower metazoan relationships from 18S rDNA sequences
    • Kim J, Kim W and Cunningham CW (1999) A new perspective on lower metazoan relationships from 18S rDNA sequences. Mol. Biol. Evol. 16: 423-427.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 423-427
    • Kim, J.1    Kim, W.2    Cunningham, C.W.3
  • 20
    • 0030120334 scopus 로고    scopus 로고
    • Early evolution of the Metazoa and phylogenetic status of diploblasts as inferred from amino acid sequence of elongation factor-1α
    • Kobayashi M, Wada H and Satoh N (1996) Early evolution of the Metazoa and phylogenetic status of diploblasts as inferred from amino acid sequence of elongation factor-1α. Mol. Phylogenet. Evol. 5: 414-422.
    • (1996) Mol. Phylogenet. Evol. , vol.5 , pp. 414-422
    • Kobayashi, M.1    Wada, H.2    Satoh, N.3
  • 21
    • 0027285959 scopus 로고
    • Close phylogenetic relationship between Vestimentifera (tube worms) and Annelida revealed by the amino acid sequence of elongation factor-1α
    • Kojima S, Hashimoto T, Hasegawa M, Murata S, Ohta S, Seki H and Okada N (1993) Close phylogenetic relationship between Vestimentifera (tube worms) and Annelida revealed by the amino acid sequence of elongation factor-1α. J. Mol. Evol. 37: 66-70.
    • (1993) J. Mol. Evol. , vol.37 , pp. 66-70
    • Kojima, S.1    Hashimoto, T.2    Hasegawa, M.3    Murata, S.4    Ohta, S.5    Seki, H.6    Okada, N.7
  • 22
    • 0024321368 scopus 로고
    • Organization and nucleotide sequence of a transcriptional unit of Methanococcus vannielii comprising genes for protein synthesis elongation factors and ribosomal proteins
    • Lechner K, Heller G and Bock A (1989) Organization and nucleotide sequence of a transcriptional unit of Methanococcus vannielii comprising genes for protein synthesis elongation factors and ribosomal proteins. J. Mol. Evol. 29: 20-27.
    • (1989) J. Mol. Evol. , vol.29 , pp. 20-27
    • Lechner, K.1    Heller, G.2    Bock, A.3
  • 23
    • 0344530389 scopus 로고    scopus 로고
    • EF1A isoforms change in abundance and actin-binding activity during maize endosperm development
    • Lopez-Valenzuela JA, Gibbon BC, Hughes PA, Dreher TW and Larkins BA (2003) eEF1A isoforms change in abundance and actin-binding activity during maize endosperm development. Plant Physiol. 133: 1285-1295.
    • (2003) Plant Physiol. , vol.133 , pp. 1285-1295
    • Lopez-Valenzuela, J.A.1    Gibbon, B.C.2    Hughes, P.A.3    Dreher, T.W.4    Larkins, B.A.5
  • 24
    • 0025970032 scopus 로고
    • A novel eubacterial phylum: Comparative nucleotide sequence analysis of a tuf-gene of Flexistipes sinusarabici
    • Ludwig W, Wallner G, Tesch A and Klink F (1991) A novel eubacterial phylum: comparative nucleotide sequence analysis of a tuf-gene of Flexistipes sinusarabici. FEMS Microbiol. Lett. 62: 139-143.
    • (1991) FEMS Microbiol. Lett. , vol.62 , pp. 139-143
    • Ludwig, W.1    Wallner, G.2    Tesch, A.3    Klink, F.4
  • 25
    • 0035859814 scopus 로고    scopus 로고
    • Evaluating hypotheses of basal animal phylogeny using complete sequences of large and small subunit rRNA
    • Medina M, Collins AG, Silberman JD and Sogin ML (2001) Evaluating hypotheses of basal animal phylogeny using complete sequences of large and small subunit rRNA. Proc. Natl. Acad. Sci. 98: 9707-9712.
    • (2001) Proc. Natl. Acad. Sci. , vol.98 , pp. 9707-9712
    • Medina, M.1    Collins, A.G.2    Silberman, J.D.3    Sogin, M.L.4
  • 26
    • 0002024553 scopus 로고    scopus 로고
    • The protein biosynthesis elongation cycle
    • N. Sonenberg J. W. B. Hershey and M. B. Mathews. eds., Cold Spring Harbor Laboratory Press, NY
    • Merrick WC and Nyborg J (2000). The protein biosynthesis elongation cycle. In Translational Control of Gene Expression, N. Sonenberg J. W. B. Hershey and M. B. Mathews. eds., Cold Spring Harbor Laboratory Press, NY, pp. 89-125.
    • (2000) Translational Control of Gene Expression , pp. 89-125
    • Merrick, W.C.1    Nyborg, J.2
  • 27
    • 0030615250 scopus 로고    scopus 로고
    • Phylogenetic utility of elongation factor-1α in noctuoidea (Insecta: Lepidoptera): The limits of synonymous substitution
    • Mitchell A, Cho S, Regier JC, Mitter C, Poole RW and Matthews M (1997) Phylogenetic utility of elongation factor-1α in noctuoidea (Insecta: Lepidoptera): the limits of synonymous substitution. Mol. Biol. Evol. 14: 381-390.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 381-390
    • Mitchell, A.1    Cho, S.2    Regier, J.C.3    Mitter, C.4    Poole, R.W.5    Matthews, M.6
  • 28
    • 0035859896 scopus 로고    scopus 로고
    • DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes
    • Murray AE, Lies D, Li G, Nealson K, Zhou J and Tiedje JM (2001) DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes. Proc. Natl. Acad. Sci. 98: 9853-9858.
    • (2001) Proc. Natl. Acad. Sci. , vol.98 , pp. 9853-9858
    • Murray, A.E.1    Lies, D.2    Li, G.3    Nealson, K.4    Zhou, J.5    Tiedje, J.M.6
  • 29
    • 0030471363 scopus 로고    scopus 로고
    • Bundling of actin filaments by elongation factor 1α inhibits polymerization at filament ends
    • Murray JW, Edmonds BT, Liu G and Condeelis J (1996) Bundling of actin filaments by elongation factor 1α inhibits polymerization at filament ends. J. Cell Biol. 135: 1309-1321.
    • (1996) J. Cell Biol. , vol.135 , pp. 1309-1321
    • Murray, J.W.1    Edmonds, B.T.2    Liu, G.3    Condeelis, J.4
  • 30
    • 0028076017 scopus 로고
    • cDNA sequence of zebrafish (Brachydanio rerio) translation elongation factor-1α molecular phylogeny of eukaryotes based on elongation factor-1α protein sequences
    • Nordnes S, Krauss S and Johansen T (1994) cDNA sequence of zebrafish (Brachydanio rerio) translation elongation factor-1α molecular phylogeny of eukaryotes based on elongation factor-1α protein sequences. Biochim. Biophys. Acta. 1219: 529-532.
    • (1994) Biochim. Biophys. Acta , vol.1219 , pp. 529-532
    • Nordnes, S.1    Krauss, S.2    Johansen, T.3
  • 31
    • 0033427942 scopus 로고    scopus 로고
    • Evolution of the major lineages of tapeworms (Platyhelminthes: Cestoidea) inferred from 18S ribosomal DNA and elongation factor-1α
    • Olson PD and Caira JN (1999) Evolution of the major lineages of tapeworms (Platyhelminthes: Cestoidea) inferred from 18S ribosomal DNA and elongation factor-1α. J. Parasitol. 85: 1134-1159.
    • (1999) J. Parasitol. , vol.85 , pp. 1134-1159
    • Olson, P.D.1    Caira, J.N.2
  • 32
    • 0036355308 scopus 로고    scopus 로고
    • A maximum-likelihood analysis of eight phylogenetic markers in gallwasps (Hymenoptera: Cynipidae): Implications for insect phylogenetic studies
    • Rokas A, Nylander JA, Ronquist F and Stone GN (2002) A maximum-likelihood analysis of eight phylogenetic markers in gallwasps (Hymenoptera: Cynipidae): implications for insect phylogenetic studies. Mol. Phylogenet. Evol. 22: 206-219.
    • (2002) Mol. Phylogenet. Evol. , vol.22 , pp. 206-219
    • Rokas, A.1    Nylander, J.A.2    Ronquist, F.3    Stone, G.N.4
  • 33
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N and Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 34
    • 0024570876 scopus 로고
    • Duplication of the tuf gene: A new insight into the phylogeny of eubacteria
    • Sela S, Yogev D, Razin S and Bercovier H (1989) Duplication of the tuf gene: a new insight into the phylogeny of eubacteria. J. Bacteriol. 171: 581-584.
    • (1989) J. Bacteriol. , vol.171 , pp. 581-584
    • Sela, S.1    Yogev, D.2    Razin, S.3    Bercovier, H.4
  • 35
    • 0034702092 scopus 로고    scopus 로고
    • Phylogenetic analysis of arthropods using two nuclear protein-encoding genes supports a crustacean + hexapod clade
    • Shultz JW and Regier JC (2000) Phylogenetic analysis of arthropods using two nuclear protein-encoding genes supports a crustacean + hexapod clade. Proc. R. Soc. Lond. B Biol. Sci. 267: 1011-1019.
    • (2000) Proc. R. Soc. Lond. B Biol. Sci. , vol.267 , pp. 1011-1019
    • Shultz, J.W.1    Regier, J.C.2
  • 36
    • 0035972750 scopus 로고    scopus 로고
    • Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes
    • Voigt K and Wostemeyer, J (2001) Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes. Gene 270: 113-120.
    • (2001) Gene , vol.270 , pp. 113-120
    • Voigt, K.1    Wostemeyer, J.2
  • 38
    • 0025000290 scopus 로고
    • Identification of an actin-binding protein from Dictyostelium as elongation factor 1a
    • Yang F, Demma M, Warren V, Dharmawardhane S and Condeelis J (1990) Identification of an actin-binding protein from Dictyostelium as elongation factor 1a. Nature 347: 494-496.
    • (1990) Nature , vol.347 , pp. 494-496
    • Yang, F.1    Demma, M.2    Warren, V.3    Dharmawardhane, S.4    Condeelis, J.5


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