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Volumn 79, Issue 4, 2005, Pages 2631-2636

Detection and partial characterization of simian immunodeficiency virus SIVsm strains from bush meat samples from rural Sierra Leone

Author keywords

[No Author keywords available]

Indexed keywords

GAG PROTEIN; POL PROTEIN; VIRUS ENVELOPE PROTEIN;

EID: 13444280315     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.4.2631-2636.2005     Document Type: Article
Times cited : (47)

References (39)
  • 1
    • 0345963070 scopus 로고    scopus 로고
    • The history of SIVs and AIDS: Epidemiology, phylogeny and biology of isolates from naturally infected non-human primates (NHP) in Africa
    • Apetrei, C., D. L. Robertson, and P. A. Marx. 2004. The history of SIVs and AIDS: epidemiology, phylogeny and biology of isolates from naturally infected non-human primates (NHP) in Africa. Front. Biosci. 9:225-254.
    • (2004) Front. Biosci. , vol.9 , pp. 225-254
    • Apetrei, C.1    Robertson, D.L.2    Marx, P.A.3
  • 2
    • 3042799522 scopus 로고    scopus 로고
    • Simian retroviral infections in human beings
    • Apetrei, C., and P. A. Marx. 2004. Simian retroviral infections in human beings. Lancet 364:137-138.
    • (2004) Lancet , vol.364 , pp. 137-138
    • Apetrei, C.1    Marx, P.A.2
  • 4
    • 0038279871 scopus 로고    scopus 로고
    • Characterization of a novel simian immunodeficiency virus (SIVmonNG1) genome sequence from a mona monkey (Cercopithecus mona)
    • Barlow, K. L., A. O. Ajao, and J. P. Clewley. 2003. Characterization of a novel simian immunodeficiency virus (SIVmonNG1) genome sequence from a mona monkey (Cercopithecus mona). J. Virol. 77:6879-6888.
    • (2003) J. Virol. , vol.77 , pp. 6879-6888
    • Barlow, K.L.1    Ajao, A.O.2    Clewley, J.P.3
  • 7
    • 0002578250 scopus 로고    scopus 로고
    • Diversity and evolution of primate lentiviruses
    • C. L. Kuiken, B. Foley, B. Hahn, B. Korber, F. McCutchan, P. A. Marx, J. W. Mellors, J. I. Mullins, J. Sodroski, and S. Wolinksy (ed.), Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, N. Mex.
    • Beer, B. E., E. Bailes, P. M. Sharp, and V. M. Hirsch. 1999. Diversity and evolution of primate lentiviruses, p. 460-474. In C. L. Kuiken, B. Foley, B. Hahn, B. Korber, F. McCutchan, P. A. Marx, J. W. Mellors, J. I. Mullins, J. Sodroski, and S. Wolinksy (ed.), Human retroviruses and AIDS 1999: a compilation and analysis of nucleic acid and amino acid sequences. Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, N. Mex.
    • (1999) Human Retroviruses and AIDS 1999: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences , pp. 460-474
    • Beer, B.E.1    Bailes, E.2    Sharp, P.M.3    Hirsch, V.M.4
  • 8
    • 0036623490 scopus 로고    scopus 로고
    • Preferential host switching by primate lentiviruses can account for phylogenetic similarity with the primate phylogeny
    • Charleston, M. A., and D. L. Robertson. 2002. Preferential host switching by primate lentiviruses can account for phylogenetic similarity with the primate phylogeny. Syst. Biol. 51:528-535.
    • (2002) Syst. Biol. , vol.51 , pp. 528-535
    • Charleston, M.A.1    Robertson, D.L.2
  • 9
    • 0031001926 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 2 (HIV-2) seroprevalence and characterization of a distinct HIV-2 genetic subtype from the natural range of simian immunodeficiency virus-infected sooty mangabeys
    • Chen, Z., A. Luckay, D. L. Sodora, P. Telfer, P. Reed, A. Gettie, J. M. Kanu, R. F. Shadek, J. Yee, D. D. Ho, L. Zhang, and P. A. Marx. 1997. Human immunodeficiency virus type 2 (HIV-2) seroprevalence and characterization of a distinct HIV-2 genetic subtype from the natural range of simian immunodeficiency virus-infected sooty mangabeys. J. Virol. 71:3953-3960.
    • (1997) J. Virol. , vol.71 , pp. 3953-3960
    • Chen, Z.1    Luckay, A.2    Sodora, D.L.3    Telfer, P.4    Reed, P.5    Gettie, A.6    Kanu, J.M.7    Shadek, R.F.8    Yee, J.9    Ho, D.D.10    Zhang, L.11    Marx, P.A.12
  • 10
    • 0029938478 scopus 로고    scopus 로고
    • Genetic characterization of new West African simian immunodeficiency virus SIVsm: Geographic clustering of household-derived SIV strains with human immunodeficiency virus type 2 subtypes and genetically diverse viruses from a single feral sooty mangabey troop
    • Chen, Z., P. Telfer, A. Gettie, P. Reed, L. Zhang, D. D. Ho, and P. A. Marx. 1996. Genetic characterization of new West African simian immunodeficiency virus SIVsm: geographic clustering of household-derived SIV strains with human immunodeficiency virus type 2 subtypes and genetically diverse viruses from a single feral sooty mangabey troop. J. Virol. 70:3617-3627.
    • (1996) J. Virol. , vol.70 , pp. 3617-3627
    • Chen, Z.1    Telfer, P.2    Gettie, A.3    Reed, P.4    Zhang, L.5    Ho, D.D.6    Marx, P.A.7
  • 13
    • 0242492856 scopus 로고    scopus 로고
    • Identification of a new simian immunodeficiency virus lineage with a vpu gene present among different Cercopithecus monkeys (C. mona, C. cephus, and C. nictitans) from Cameroon
    • Courgnaud, V., B. Abela, X. Pourrut, E. Mpoudi-Ngole, S. Loul, E. Delaporte, and M. Peeters. 2003. Identification of a new simian immunodeficiency virus lineage with a vpu gene present among different Cercopithecus monkeys (C. mona, C. cephus, and C. nictitans) from Cameroon. J. Virol. 77:12523-12534.
    • (2003) J. Virol. , vol.77 , pp. 12523-12534
    • Courgnaud, V.1    Abela, B.2    Pourrut, X.3    Mpoudi-Ngole, E.4    Loul, S.5    Delaporte, E.6    Peeters, M.7
  • 14
    • 0036319292 scopus 로고    scopus 로고
    • Characterization of a novel simian immunodeficiency virus with a vpu gene from greater spot-nosed monkeys (Cercopithecus nictitans) provides new insights into simian/human immunodeficiency virus phylogeny
    • Courgnaud, V., M. Salemi, X. Pourrut, E. Mpoudi-Ngole, B. Abela, P. Auzel, F. Bibollet-Ruche, B. Hahn, A. M. Vandamme, E. Delaporte, and M. Peeters. 2002. Characterization of a novel simian immunodeficiency virus with a vpu gene from greater spot-nosed monkeys (Cercopithecus nictitans) provides new insights into simian/human immunodeficiency virus phylogeny. J. Virol. 76:8298-8309.
    • (2002) J. Virol. , vol.76 , pp. 8298-8309
    • Courgnaud, V.1    Salemi, M.2    Pourrut, X.3    Mpoudi-Ngole, E.4    Abela, B.5    Auzel, P.6    Bibollet-Ruche, F.7    Hahn, B.8    Vandamme, A.M.9    Delaporte, E.10    Peeters, M.11
  • 15
    • 0037213282 scopus 로고    scopus 로고
    • Partial molecular characterization of two simian immunodeficiency viruses (SIV) from African colobids: SIVwrc from Western red colobus (Piliocolobus badius) and SIVolc from olive colobus (Procolobus verus)
    • Courgnaud, V., P. Formenty, C. Akoua-Koffi, R. Noe, C. Boesch, E. Delaporte, and M. Peeters. 2003. Partial molecular characterization of two simian immunodeficiency viruses (SIV) from African colobids: SIVwrc from Western red colobus (Piliocolobus badius) and SIVolc from olive colobus (Procolobus verus). J. Virol. 77:744-748.
    • (2003) J. Virol. , vol.77 , pp. 744-748
    • Courgnaud, V.1    Formenty, P.2    Akoua-Koffi, C.3    Noe, R.4    Boesch, C.5    Delaporte, E.6    Peeters, M.7
  • 16
    • 0035169607 scopus 로고    scopus 로고
    • Characterization of a novel simian immunodeficiency virus from guereza colobus monkeys (Colobus guereza) in Cameroon: A new lineage in the nonhuman primate lentivirus family
    • Courgnaud, V., X. Pourrut, F. Bibollet-Ruche, E. Mpoudi-Ngole, A. Bourgeois, E. Delaporte, and M. Peeters. 2001. Characterization of a novel simian immunodeficiency virus from guereza colobus monkeys (Colobus guereza) in Cameroon: a new lineage in the nonhuman primate lentivirus family. J. Virol. 75:857-866.
    • (2001) J. Virol. , vol.75 , pp. 857-866
    • Courgnaud, V.1    Pourrut, X.2    Bibollet-Ruche, F.3    Mpoudi-Ngole, E.4    Bourgeois, A.5    Delaporte, E.6    Peeters, M.7
  • 23
    • 0037379225 scopus 로고    scopus 로고
    • Simian immunodeficiency viruses from multiple lineages infect human macrophages: Implications for cross-species transmission
    • Grimm, T. A., B. E. Beer, V. M. Hirsch, and K. A. Clouse. 2003. Simian immunodeficiency viruses from multiple lineages infect human macrophages: Implications for cross-species transmission. J. Acquir. Immune Defic. Syndr. 32:362-369.
    • (2003) J. Acquir. Immune Defic. Syndr. , vol.32 , pp. 362-369
    • Grimm, T.A.1    Beer, B.E.2    Hirsch, V.M.3    Clouse, K.A.4
  • 24
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., H. Kishino, and T. Yano. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 25
    • 0032935029 scopus 로고    scopus 로고
    • Characterization of a novel simian immunodeficiency virus (SIV) from L'Hoest monkeys (Cercopithecus l'hoesti): Implications for the origin of SIVmnd and other primate lentiviruses
    • Hirsch, V. M., B. J. Campbell, E. Bailes, R. Goeken, C. Brown, W. R. Elkins, M. Axthelm, M. Murphey-Corb, and P. M. Sharp. 1999. Characterization of a novel simian immunodeficiency virus (SIV) from L'Hoest monkeys (Cercopithecus l'hoesti): implications for the origin of SIVmnd and other primate lentiviruses. J. Virol. 73:1036-1045.
    • (1999) J. Virol. , vol.73 , pp. 1036-1045
    • Hirsch, V.M.1    Campbell, B.J.2    Bailes, E.3    Goeken, R.4    Brown, C.5    Elkins, W.R.6    Axthelm, M.7    Murphey-Corb, M.8    Sharp, P.M.9
  • 26
    • 0344406982 scopus 로고    scopus 로고
    • Characterization and comparison of recombinant simian immunodeficiency virus from drill (Mandrillus leucophaeus) and mandrill (Mandrillus sphinx) isolates
    • Hu, J., W. M. Switzer, B. T. Foley, D. L. Robertson, R. M. Goeken, B. T. Korber, V. M. Hirsch, and B. E. Beer. 2003. Characterization and comparison of recombinant simian immunodeficiency virus from drill (Mandrillus leucophaeus) and mandrill (Mandrillus sphinx) isolates. J. Virol. 77:4867-4880.
    • (2003) J. Virol. , vol.77 , pp. 4867-4880
    • Hu, J.1    Switzer, W.M.2    Foley, B.T.3    Robertson, D.L.4    Goeken, R.M.5    Korber, B.T.6    Hirsch, V.M.7    Beer, B.E.8
  • 28
    • 0030113347 scopus 로고    scopus 로고
    • SIVagm incidence over two decades in a natural population of Ethiopian grivet monkeys (Cercopithecus aethiops aethiops)
    • Jolly, C. J., J. E. Phillips-Conroy, T. R. Turner, S. Broussard, and J. S. Allan. 1996. SIVagm incidence over two decades in a natural population of Ethiopian grivet monkeys (Cercopithecus aethiops aethiops). J. Med. Primatol. 25:78-83.
    • (1996) J. Med. Primatol. , vol.25 , pp. 78-83
    • Jolly, C.J.1    Phillips-Conroy, J.E.2    Turner, T.R.3    Broussard, S.4    Allan, J.S.5
  • 31
    • 0028033283 scopus 로고
    • Isolation of simian immunodeficiency viruses from two sooty mangabeys in Cote d'Ivoire: Virological and genetic characterization and relationship to other HIV type 2 and SIVsm/mac strains
    • Peeters, M., W. Janssens, K. Fransen, J. Brandful, L. Heyndrickx, K. Koffi, E. Delaporte, P. Piot, G. M. Gershy-Damet, and G. van der Groen. 1994. Isolation of simian immunodeficiency viruses from two sooty mangabeys in Cote d'Ivoire: virological and genetic characterization and relationship to other HIV type 2 and SIVsm/mac strains. AIDS Res. Hum. Retrovir. 10: 1289-1294.
    • (1994) AIDS Res. Hum. Retrovir. , vol.10 , pp. 1289-1294
    • Peeters, M.1    Janssens, W.2    Fransen, K.3    Brandful, J.4    Heyndrickx, L.5    Koffi, K.6    Delaporte, E.7    Piot, P.8    Gershy-Damet, G.M.9    Van Der Groen, G.10
  • 32
    • 0035527410 scopus 로고    scopus 로고
    • Selecting the best-fit model of nucleotide substitution
    • Posada, D., and K. A. Crandall. 2001. Selecting the best-fit model of nucleotide substitution. Syst. Biol. 50:580-601.
    • (2001) Syst. Biol. , vol.50 , pp. 580-601
    • Posada, D.1    Crandall, K.A.2
  • 33
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1985. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1985) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 37
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 39
    • 0034631403 scopus 로고    scopus 로고
    • Identification of a new HIV-2 subtype based on phylogenetic analysis of full-length genomic sequence
    • Yamaguki, J. Y., S. G. Devare, and C. A. Brennan. 2000. Identification of a new HIV-2 subtype based on phylogenetic analysis of full-length genomic sequence. AIDS Res. Hum. Retrovir. 16:925-930.
    • (2000) AIDS Res. Hum. Retrovir. , vol.16 , pp. 925-930
    • Yamaguki, J.Y.1    Devare, S.G.2    Brennan, C.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.