-
2
-
-
33748690289
-
Long-range correlation properties of coding and noncoding DNA sequences: GenBank analysis
-
S.V. Buldyrev Long-range correlation properties of coding and noncoding DNA sequences: GenBank analysis Phys. Rev., E 51 1995 5084 5091
-
(1995)
Phys. Rev., e
, vol.51
, pp. 5084-5091
-
-
Buldyrev, S.V.1
-
3
-
-
0141792890
-
A discrete autoregressive process as a model for short-range correlations in DNA sequences
-
M. Dehnert, W.E. Helm, and M.-T. Hütt A discrete autoregressive process as a model for short-range correlations in DNA sequences Physica A 327 2003 535 553
-
(2003)
Physica a
, vol.327
, pp. 535-553
-
-
Dehnert, M.1
Helm, W.E.2
Hütt, M.-T.3
-
6
-
-
4043180539
-
Fractal properties of the human genome
-
S. Garte Fractal properties of the human genome J. Theor. Biol. 230 2004 251 260
-
(2004)
J. Theor. Biol.
, vol.230
, pp. 251-260
-
-
Garte, S.1
-
7
-
-
0035049521
-
Genome-scale compositional comparisons in eukaryotes
-
A.J. Gentles, and S. Karlin Genome-scale compositional comparisons in eukaryotes Genome Res. 11 2001 540 546
-
(2001)
Genome Res.
, vol.11
, pp. 540-546
-
-
Gentles, A.J.1
Karlin, S.2
-
8
-
-
0034180314
-
Species independence of mutual information in coding and noncoding DNA
-
I. Grosse, H. Herzel, S.V. Buldyrev, and H.E. Stanley Species independence of mutual information in coding and noncoding DNA Phys. Rev., E 61 2000 5624 5629
-
(2000)
Phys. Rev., e
, vol.61
, pp. 5624-5629
-
-
Grosse, I.1
Herzel, H.2
Buldyrev, S.V.3
Stanley, H.E.4
-
9
-
-
41349106744
-
Analysis of symbolic sequences using the Jensen-Shannon divergence
-
I. Grosse, P. Bernaola-Galván, P. Carpena, R. Román- Roldán, J. Oliver, and H. Stanley Analysis of symbolic sequences using the Jensen-Shannon divergence Phys. Rev., E 65 2002 041905
-
(2002)
Phys. Rev., e
, vol.65
, pp. 041905
-
-
Grosse, I.1
Bernaola-Galván, P.2
Carpena, P.3
Román-Roldán, R.4
Oliver, J.5
Stanley, H.6
-
10
-
-
84960450653
-
Prokaryote phylogeny without sequence alignment: From avoidance signature to composition distance
-
B. Hao, and J. Qi Prokaryote phylogeny without sequence alignment: from avoidance signature to composition distance IEEE proceedings of the computational systems bioinformatics 2003
-
(2003)
IEEE Proceedings of the Computational Systems Bioinformatics
-
-
Hao, B.1
Qi, J.2
-
11
-
-
4243465861
-
Entropies of biosequences: The role of repeats
-
H. Herzel, W. Ebeling, and A. Schmitt Entropies of biosequences: the role of repeats Phys. Rev., E 50 1994 5061 5071
-
(1994)
Phys. Rev., e
, vol.50
, pp. 5061-5071
-
-
Herzel, H.1
Ebeling, W.2
Schmitt, A.3
-
12
-
-
0034699776
-
Optimization of coding potentials using positional dependence of nucleotide frequencies
-
D. Holste, I. Grosse, S. Buldyrev, H. Stanley, and H. Herzel Optimization of coding potentials using positional dependence of nucleotide frequencies J. Theor. Biol. 206 2000 525 537
-
(2000)
J. Theor. Biol.
, vol.206
, pp. 525-537
-
-
Holste, D.1
Grosse, I.2
Buldyrev, S.3
Stanley, H.4
Herzel, H.5
-
13
-
-
42749101835
-
Repeats and correlations in human DNA sequences
-
D. Holste, I. Grosse, S. Beirer, P. Schieg, and H. Herzel Repeats and correlations in human DNA sequences Phys. Rev., E 67 2003 061913
-
(2003)
Phys. Rev., e
, vol.67
, pp. 061913
-
-
Holste, D.1
Grosse, I.2
Beirer, S.3
Schieg, P.4
Herzel, H.5
-
14
-
-
0141526057
-
-
Tech. Rep. NPS55-78-022, Naval Postgraduate School, Monterey, California.
-
Jacobs, P., Lewis, P., 1978. Discrete time series generated by mixtures III: autoregressive processes (DAR(p)). Tech. Rep. NPS55-78-022, Naval Postgraduate School, Monterey, California.
-
(1978)
Discrete Time Series Generated by Mixtures III: Autoregressive Processes (DAR(p))
-
-
Jacobs, P.1
Lewis, P.2
-
15
-
-
84986772869
-
Stationary discrete autoregressive-moving average time series generated by mixtures
-
P. Jacobs, and P. Lewis Stationary discrete autoregressive-moving average time series generated by mixtures J. Time Ser. Anal. 4 1983 19 36
-
(1983)
J. Time Ser. Anal.
, vol.4
, pp. 19-36
-
-
Jacobs, P.1
Lewis, P.2
-
16
-
-
0027458843
-
Patchiness and correlations in DNA sequences
-
S. Karlin, and V. Brendel Patchiness and correlations in DNA sequences Science 259 1993 677 680
-
(1993)
Science
, vol.259
, pp. 677-680
-
-
Karlin, S.1
Brendel, V.2
-
17
-
-
0028606501
-
Comparisons of eukaryotic genomic sequences
-
S. Karlin, and I. Ladunga Comparisons of eukaryotic genomic sequences PNAS 91 1994 12832 12836
-
(1994)
PNAS
, vol.91
, pp. 12832-12836
-
-
Karlin, S.1
Ladunga, I.2
-
18
-
-
0030923586
-
Compositional differences within and between eukaryotic genomes
-
S. Karlin, and J. Mrázek Compositional differences within and between eukaryotic genomes PNAS 94 1997 10227 10232
-
(1997)
PNAS
, vol.94
, pp. 10227-10232
-
-
Karlin, S.1
Mrázek, J.2
-
19
-
-
84956088098
-
αspectrum in a noncoding DNA sequence
-
αspectrum in a noncoding DNA sequence Europhys. Lett. 17 1992 655 660
-
(1992)
Europhys. Lett.
, vol.17
, pp. 655-660
-
-
Li, W.1
Kaneko, K.2
-
20
-
-
19544376315
-
Low frequency rhythms in human DNA sequences: A key to the organization of gene location and orientation?
-
S. Nicolay, F. Argoul, M. Touchon, Y. d'Aubenton Carafa, C. Thermes, and A. Arneodo Low frequency rhythms in human DNA sequences: a key to the organization of gene location and orientation? Phys. Rev. Lett. 93 2004 108101
-
(2004)
Phys. Rev. Lett.
, vol.93
, pp. 108101
-
-
Nicolay, S.1
Argoul, F.2
Touchon, M.3
D'Aubenton Carafa, Y.4
Thermes, C.5
Arneodo, A.6
-
21
-
-
0033621101
-
Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: Hippopotamuses are the closest extant relatives of whales
-
M. Nikaido, A.P. Rooney, and N. Okada Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: hippopotamuses are the closest extant relatives of whales PNAS 96 1999 10261 10266
-
(1999)
PNAS
, vol.96
, pp. 10261-10266
-
-
Nikaido, M.1
Rooney, A.P.2
Okada, N.3
-
22
-
-
19444377047
-
Scaling and hierarchical structures in DNA sequences
-
Z. Ouyang, C. Wang, and Z.-S. She Scaling and hierarchical structures in DNA sequences Phys. Rev. Lett. 93 2004 078103
-
(2004)
Phys. Rev. Lett.
, vol.93
, pp. 078103
-
-
Ouyang, Z.1
Wang, C.2
She, Z.-S.3
-
23
-
-
0030203863
-
TREEVIEW: An application to display phylogenetic trees on personal computers
-
R.D.M. Page TREEVIEW: an application to display phylogenetic trees on personal computers Comput. Appl. Biosci. 12 1996 357 358
-
(1996)
Comput. Appl. Biosci.
, vol.12
, pp. 357-358
-
-
Page, R.D.M.1
-
24
-
-
0026585152
-
Long-range correlations in nucleotide sequences
-
C.-K. Peng Long-range correlations in nucleotide sequences Nature 356 1992 168 170
-
(1992)
Nature
, vol.356
, pp. 168-170
-
-
Peng, C.-K.1
-
25
-
-
1242335920
-
Whole genome prokaryote phylogeny without sequence alignment: A K-string composition approach
-
J. Qi, B. Wang, and B. Hao Whole genome prokaryote phylogeny without sequence alignment: a K-string composition approach J. Mol. Evol. 58 2004 1 11
-
(2004)
J. Mol. Evol.
, vol.58
, pp. 1-11
-
-
Qi, J.1
Wang, B.2
Hao, B.3
-
26
-
-
0242365676
-
Genome-scale approaches to resolving incongruence in molecular phylogenies
-
A. Rokas, B.L. Williams, N. King, and S.B. Carroll Genome-scale approaches to resolving incongruence in molecular phylogenies Nature 425 2003 798 804
-
(2003)
Nature
, vol.425
, pp. 798-804
-
-
Rokas, A.1
Williams, B.L.2
King, N.3
Carroll, S.B.4
-
27
-
-
0030794201
-
Molecular evidence from retroposons that whales form a clade within even-toed ungulates
-
M. Shimamura Molecular evidence from retroposons that whales form a clade within even-toed ungulates Nature 388 1997 666 670
-
(1997)
Nature
, vol.388
, pp. 666-670
-
-
Shimamura, M.1
-
28
-
-
0032900532
-
Genome phylogeny based on gene content
-
B. Snel, P. Bork, and M.A. Huynen Genome phylogeny based on gene content Nat. Genet. 21 1999 108 110
-
(1999)
Nat. Genet.
, vol.21
, pp. 108-110
-
-
Snel, B.1
Bork, P.2
Huynen, M.A.3
-
29
-
-
0000204878
-
Evolution of long-range fractal correlations and 1/f noise in DNA base sequences
-
R.F. Voss Evolution of long-range fractal correlations and 1/f noise in DNA base sequences Phys. Rev. Lett. 68 1992 3805 3808
-
(1992)
Phys. Rev. Lett.
, vol.68
, pp. 3805-3808
-
-
Voss, R.F.1
-
30
-
-
2642575083
-
DNA sequence and comparative analysis of chimpanzee chromosome
-
H. Watanabe DNA sequence and comparative analysis of chimpanzee chromosome Nature 429 2004 382 388
-
(2004)
Nature
, vol.429
, pp. 382-388
-
-
Watanabe, H.1
|