Bacillus velezensis sp. nov., a surfactant-producing bacterium isolated from the river Vélez in Málaga, southern Spain

International Journal of Systematic and Evolutionary Microbiology

Volumn 55, Issue 1, 2005, Pages 191-195

  Ruiz García, Cristina ^a   Béjar, Victoria ^a   Martínez Checa, Fernando ^a   Llamas, Inmaculada ^a   Quesada, Emilia ^a  

^a UNIVERSITY OF GRANADA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

AMOXICILLIN; AMOXICILLIN PLUS CLAVULANIC ACID; AZTREONAM; BACTERIAL DNA; CEFALOTIN; CHLORAMPHENICOL; COLISTIN; COTRIMOXAZOLE; DOXYCYCLINE; ERYTHROMYCIN; FATTY ACID; KANAMYCIN; MENAQUINONE; NALIDIXIC ACID; NITROFURANTOIN; NORFLOXACIN; NOVOBIOCIN; RIFAMPICIN; SURFACTANT; VANCOMYCIN; WATER;

ARTICLE; BACILLUS; BACILLUS AMYLOLIQUEFACIENS; BACILLUS ATROPHAEUS; BACILLUS MOJAVENSIS; BACILLUS SUBTILIS; BACILLUS VALLISMORTIS; BACILLUS VELEZENSIS; BACTERIAL STRAIN; BACTERIUM ISOLATION; CLASSIFICATION; DNA CONTENT; DNA DNA HYBRIDIZATION; GENUS; GRAM POSITIVE BACTERIUM; LIPID COMPOSITION; MOLECULAR PHYLOGENY; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; RIVER; SPAIN; SPECIES DIFFERENCE; SPOROGENESIS; TYPE STRAIN;

BACILLUS; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RIVERS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPAIN; SURFACE-ACTIVE AGENTS;

BACILLUS AMYLOLIQUEFACIENS; BACILLUS ATROPHAEUS; BACILLUS MOJAVENSIS; BACILLUS SUBTILIS; BACILLUS VALLISMORTIS; BACTERIA (MICROORGANISMS); POSIBACTERIA;

EID: 13244255658     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63310-0     Document Type: Article

References (30)

1. Banat, J. M., Makkar, R. S. & Cameotra, S. S. (2000). Potential commercial applications of microbial surfactants. Appl Microbiol Biotechnol 53, 495-508.
2. Bodour, A. A. & Miller-Maier, R. M. (1998). Application of a modified drop-collapse technique for surfactant quantitation and screening of biosurfactant-producing microorganisms. J Microbiol Methods 32, 273-280.
3. Bouchotroch, S., Quesada, E., Del Moral, A., Llamas, I. & Béjar, V. (2001). Halomonas maura sp. nov., a novel, moderately halophilic, exopolysaccharide-producing bacterium. Int J Syst Evol Microbiol 51, 1625-1632.
4. Brosius, J., Palmer, M. L., Kennedy, P. J. & Noller, H. F. (1978). Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A 75, 4801-4805.
5. Claus, D. & Berkeley, R. C. W. (1986). Genus Bacillus Cohn 1872. In Bergey's Manual of Systematic Bacteriology vol. 2, pp. 1105-1139. Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
6. Cowan, S. T. & Steel, K. J. (1994). Manual for the Identification of Medical Bacteria. Cambridge: Cambridge University Press.
7. Ferragut, C. & Leclerc, H. (1976). Étude comparative des méthodes de détermination du Tm de l'ADN bacté rien. Ann Microbiol 127, 223-235 (in French).
8. Harwood, C. R. (1989). Bacillus. Biotechnology Handbooks. 2. Edited by T. Atkinson & R. F. Sherwood. New York & London: Plenum.
9. Jain, D. K., Collins-Thomson, D. L., Lee, H. & Trevors, J. T. (1991). A drop-collapsing test for screening surfactant-producing micro-organisms. J Microbiol Methods 13, 271-279.
10. Kumar, S., Tamura, K., Jakobsen, I. B. & Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
11. Lind, E. & Ursing, J. (1986). Clinical strains of Enterobacter agglomerans (synonyms, Erwinia herbicola, Erwinia milletiae) identified by DNA-DNA hybridization. Acta Pathol Microbiol Immunol Scand Sect B 94, 205-213.
12. Logan, N. A. & Berkeley, R. C. W. (1984). Identification of Bacillus strains using the API system. J Gen Microbiol 130, 1871-1882.
13. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3, 208-212.
14. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
15. Moraine, R. A. & Rogovin, P. (1966). Kinetics of polysaccharide B-1459 fermentation. Biotechnol Bioengin 8, 511-524.
16. Nakamura, L. K. (1989). Taxonomic relationship of black-pigmented Bacillus subtilis strains and a proposal for Bacillus atrophaeus sp. nov. Int J Syst Bacteriol 39, 295-300.
17. Nakamura, L. K., Roberts, M. S. & Cohan, F. M. (1999). Relationship of Bacillus subtilis clades associated with strains 168 and W23: a proposal for Bacillus subtilis subsp. subtilis subsp. nov. and Bacillus subtilis subsp. spizizenii subsp. nov. Int J Syst Bacteriol 49, 1211-1215.
18. Owen, R. J. & Hill, L. R. (1979). The estimation of base compositions, base pairing and genome size of bacterial deoxyribonucleic acids. In Identification Methods for Microbiologists 2nd edn, pp. 277-296. Edited by F. A. Skinner & D. W. Lovelock. London: Academic Press.
19. Owen, R. J. & Pitcher, D. (1985). Current methods for estimating DNA composition and levels of DNA-DNA hybridization. In Chemical Methods in Bacterial Systematics, pp. 67-93. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
20. Pinchuk, I. V., Bressollier, P., Sorokulova, I. B., Verneuil, B. & Urdaci, M. (2002). Amicoumacin antibiotic production and genetic diversity of Bacillus subtilis strains isolated from different habitats. Res Microbiol 153, 269-276.
21. Priest, F. G., Goodfellow, M., Shute, L. A. & Berkeley, R. C. W. (1987). Bacillus amyloliquefaciens sp. nov., nom. rev. Int J Syst Bacteriol 37, 69-71.
22. Roberts, M. S., Nakamura, L. K. & Cohan, F. M. (1994). Bacillus mojavensis sp. nov., distinguishable from Bacillus subtilis by sexual isolation, divergence in DNA sequence and differences in fatty acid composition. Int J Syst Bacteriol 44 256-264.
23. Roberts, M. S., Nakamura, L. K. & Cohan, F. M. (1996). Bacillus vallismortis sp. nov., a dose relative of Bacillus subtilis isolated from soil in Death Valley, California. Int J Syst Bacteriol 46, 470-475.
24. Rodríguez-Valera, F., Ruiz-Berraquero, F. & Ramos-Cormenzana, A. (1981). Characteristics of the heterotropic bacterial populations in hypersaline environments of different salt concentration. Microbiol Ecol 7, 235-243.
25. Saiki, R. K., Gelfand, D. H., Stoffel, S., Scharf, S. J., Higuchi, R., Horn, G. T., Mullis, K. B. & Erlich, H. A. (1988). Primer-directed enzymatic amplification of DNA with thermostable DNA polymerase. Science 239, 487-491.
26. Sneath, P. H. A. & Johnson, R. (1972). The influence on numerical taxonomic similarities of errors in microbiological test. J Gen Microbiol 72, 377-392.
27. Sneath, P. H. A. & Sokal, R. R. (1973). Numerical Taxonomy. The Principles and Practice of Numerical Classification. San Francisco: W. H. Freeman.
28. Sokal, R. R. & Michener, C. D. (1958). A statistical method for evaluating systematic relationships. Univ Kansas Sci Bull 38, 1409-1438.
29. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
30. Ziemke, F., Höfle, M. G., Lalucat, J. & Rosello-Mora, R. (1998). Reclassification of Shewanella putrefaciens Owen's group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179-186.