Membrane topology of the electrogenic aspartate-alanine antiporter AspT of Tetragenococcus halophilus

Biochemical and Biophysical Research Communications

Volumn 328, Issue 1, 2005, Pages 20-26

  Nanatani, Kei ^a   Ohonishi, Fumito ^a   Yoneyama, Hiroshi ^a   Nakajima, Tasuku ^a   Abe, Keietsu ^a  

^a TOHOKU UNIVERSITY   (Japan)

Author keywords

Aspartate:Alanine Antiporter; Electrogenic; Fusion methods; Membrane topology; Proton motive force

Indexed keywords

ALKALINE PHOSPHATASE; AMINO ACID; ANTIPORTER; ASPARTATE ALANINE ANTIPORTER; BETA LACTAMASE; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; BACTERIUM; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; CYTOPLASM; MEMBRANE STRUCTURE; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN STRUCTURE; TETRAGENOCOCCUS HALOPHILUS;

AMINO ACID SEQUENCE; ANTIPORTERS; CELL MEMBRANE; ENTEROCOCCUS; ESCHERICHIA COLI; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; RECOMBINANT FUSION PROTEINS; STRUCTURE-ACTIVITY RELATIONSHIP;

TETRAGENOCOCCUS; TETRAGENOCOCCUS HALOPHILUS;

EID: 12844256463     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2004.12.133     Document Type: Article

References (32)

1. T. Higuchi, K. Uchida, and K. Abe Aspartate decarboxylation encoded on the plasmid in the soy sauce lactic acid bacterium, Tetragenococcus halophila D10 Biosci. Biotechnol. Biochem. 62 1998 1601 1603
2. K. Uchida, Trends in preparation and uses of fermented and acidhydrolyzed soy sauce, in: Proceedings of the World Congress on Vegetable Protein Utilization in Human Foods and Animal Feedstuffs, Kraft, Inc., 1988, pp. 78-83
3. K. Abe, F. Ohnishi, K. Yagi, T. Nakajima, T. Higuchi, M. Sano, M. Machida, R.I. Sarker, and P.C. Maloney Plasmid-encoded asp operon confers a proton motive metabolic cycle catalyzed by an aspartate-alanine exchange reaction J. Bacteriol. 184 2002 2906 2913
4. K. Abe, Z.S. Ruan, and P.C. Maloney Cloning, sequencing, and expression in Escherichia coli of OxlT, the oxalate:formate exchange protein of Oxalobacter formigenes J. Biol. Chem. 271 1996 6789 6793
5. V. Anantharam, M.J. Allison, and P.C. Maloney Oxalate:formate exchange. The basis for energy coupling in Oxalobacter J. Biol. Chem. 264 1989 7244 7250
6. P.C. Maloney, R.T. Yan, and K. Abe Bacterial anion exchange: reductionist and integrative approaches to membrane biology J. Exp. Biol. 196 1994 471 482
7. T. Higuchi, H. Hayashi, and K. Abe Exchange of glutamate and gamma-aminobutyrate in a Lactobacillus strain J. Bacteriol. 179 1997 3362 3364
8. J.W. Sanders, K. Leenhouts, J. Burghoorn, J.R. Brands, G. Venema, and J. Kok A chloride-inducible acid resistance mechanism in Lactococcus lactis and its regulation Mol. Microbiol. 27 1998 299 310
9. M.P. Castanie-Cornet, and J.W. Forster Escherichia coli acid resistance: cAMP receptor protein and a 20 bp cis-acting sequence control pH and stationary phase expression of the gadA and gadBC glutamate decarboxylase genes Microbiology 147 2001 709 715
10. B. Poolman, D. Molenaar, E.J. Smid, T. Ubbink, T. Abee, P.P. Renault, and W.N. Konings Malolactic fermentation: electrogenic malate uptake and malate/lactate antiport generate metabolic energy J. Bacteriol. 173 1991 6030 6037
11. D. Molenaar, J.S. Bosscher, B. ten Brink, A.J. Driessen, and W.N. Konings Generation of a proton motive force by histidine decarboxylation and electrogenic histidine/histamine antiport in Lactobacillus buchneri J. Bacteriol. 175 1993 2864 2870
12. P.C. Maloney Bacterial transporters Curr. Opin. Cell Biol. 6 1994 571 582
13. P.C. Maloney, and T.H. Wilson Ion-coupled transport and transporters F.C. Neidhardt J.L. Ingraham K.B. Low B. Magasanik M. Schaechter H.D. Umbarger Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology 1996 ASM Press Washington, DC 1130 1148
14. C. Marty-Teysset, J.S. Lolkema, P. Schmitt, C. Divies, and W.N. Konings Membrane potential-generating transport of citrate and malate catalyzed by CitP of Leuconostoc mesenteroides J. Biol. Chem. 270 1995 25370 25376
15. C. Manoil, and J. Beckwith TnphoA: a transposon probe for protein export signals Proc. Natl. Acad. Sci. USA 82 1985 8129 8133
16. C. Manoil, J.J. Mekalanos, and J. Beckwith Alkaline phosphatase fusions: sensors of subcellular location J. Bacteriol. 172 1990 515 518
17. Y.B. Zhang, and J.K. Broome-Smith Correct insertion of a simple eukaryotic plasma-membrane protein into the cytoplasmic membrane of Escherichia coli Gene 96 1990 51 57
18. L.M. Guzman, D. Belin, M.J. Carson, and J. Beckwith Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter J. Bacteriol. 177 1995 4121 4130
19. M. Ehrmann, D. Boyd, and J. Beckwith Genetic analysis of membrane protein topology by a sandwich gene fusion approach Proc. Natl. Acad. Sci. USA 87 1990 7574 7578
20. J.K. Broome-Smith, M. Tadayyon, and Y. Zhang β-Lactamase as a probe of membrane protein assembly and protein transport Mol. Microbiol. 4 1990 1637 1644
21. D. Eisenberg, E. Schwarz, M. Komaromy, and R. Wall Analysis of membrane and surface protein sequences with the hydrophobic moment plot J. Mol. Biol. 179 1984 125 142
22. L. Guan, M. Ehrmann, H. Yoneyama, and T. Nakae Membrane topology of the xenobiotic-exporting subunit, MexB, of the MexA, B-OprM extrusion pump in Pseudomonas aeruginosa J. Biol. Chem. 274 1999 10517 10522
23. C. Manoil Analysis of membrane protein topology using alkaline phosphatase and beta-galactosidase gene fusions Methods Cell Biol. 34 1991 61 75
24. T. Hirokawa, S. Boon-Chieng, and S. Mitaku SOSUI: classification and secondary structure prediction system for membrane proteins Bioinformatics 14 1998 378 379
25. A. Krogh, B. Larsson, G. von Heijne, and E.L. Sonnhammer Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes J. Mol. Biol. 305 2001 567 580
26. E.L. Sonnhammer, G. von Heijne, and A. Krogh A hidden Markov model for predicting transmembrane helices in protein sequences Proc. Int. Conf. Intell. Syst. Mol. Biol. 6 1998 175 182
27. K. Hofman, and W. Stoffel TMbase: a database of membrane spanning protein segments Biol. Chem. Hoppe-Seyler 374 1993 166
28. L. Brocke, A. Bendahan, M. Grunewald, and B.I. Kanner Proximity of two oppositely oriented reentrant loops in the glutamate transporter GLT-1 identified by paired cysteine mutagenesis J. Biol. Chem. 277 2002 3985 3992
29. M. Grunewald, A. Bendahan, and B.I. Kanner Biotinylation of single cysteine mutants of the glutamate transporter GLT-1 from rat brain reveals its unusual topology Neuron 21 1998 623 632
30. D.A. Doyle, J.M. Cabral, R.A. Pfuetzner, A. Kuo, J.M. Gulbis, S.L. Cohen, B.T. Chait, and R. Mackinnon The structure of the potassium channel: molecular basis of K+ conduction and selectivity Science 280 1998 69 77
31. M. van Geest, and J.S. Lolkema Membrane topology of the Na(+)/citrate transporter CitS of Klebsiella pneumoniae by insertion mutagenesis Biochim. Biophys. Acta 1466 2000 328 338
32. D.J. Slotboom, W.N. Konings, and J.S. Lolkema Cysteine-scanning mutagenesis reveals a highly amphipathic, pore-lining membrane-spanning helix in the glutamate transporter GltT J. Biol. Chem. 276 2001 10775 10781