Cryptochromes and phytochromes synergistically regulate Arabidopsis root greening under blue light

Plant and Cell Physiology

Volumn 45, Issue 12, 2004, Pages 1798-1808

  Usami, Takeshi ^a   Mochizuki, Nobuyoshi ^a   Kondo, Mald ^b   Nishimura, Mikio ^b   Nagatani, Akira ^a  

^a KYOTO UNIVERSITY   (Japan)

^b NATIONAL INSTITUTE FOR BASIC BIOLOGY   (Japan)

Author keywords

Arabidopsis thaliana; Chloroplast development; Cryptochrome; Gene expression; Phytochrome; Root

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 12444311794     PISSN: 00320781     EISSN: None     Source Type: Journal    
DOI: 10.1093/pcp/pch205     Document Type: Article

References (56)

1. Ahmad, M. and Cashmore, A. R. (1993) HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor. Nature 366: 162-166.
2. Ahmad, M., Jarillo, J.A., Smirnova, O. and Cashmore, A.R. (1998) The CRY1 blue light photorecepîor of Arabidopsis interacts with phytochrome A in vitro. Mol. Cell 1: 939-948.
3. Bajaj, Y.P.S. and Mcallan, J.W. (1969) Effect of various treatments on chlorophyll formation in excised potato roots. Physiol. Plant. 22: 25-28.
4. Benvenuto, G., Formiggini, F., Laflamme, P., Malakhov, M. and Bowler, C. (2002) The photomorphogenesis regulator DET1 binds the amino-terminal tail of histone H2B in a nucleosome context. Curr. Biol. 12: 1529-1534.
5. Benzing, D.H., Friedman, W.E., Peterson, G. and Renfrew, A. (1983) Shootlessness, velamentous roots, and the pre-eminence of Orchidaceae in the epiphytic biotope. Amer. J. Bot. 70: 121-133.
6. Björn, L.O. (1980) Blue light effects on plastid development in higher plants. In The Blue Light Syndrome. Edited by Senger, H. pp. 455-464. Springer-Verlag, Berlin, Germany.
7. Björn, L.O., Suzuki, Y. and Nilsson, J. (1963) Influence of wavelength on the light response of excised wheat roots. Physiol. Plant. 16: 132-141.
8. Casal, J.J. and Boccalandro, H. (1995) Co-action between phytochrome B and HY4 in Arabidopsis thaliana. Planta 197: 213-218.
9. Casal, J.J. and Mazzella, M.A. (1998) Conditional synergism between cryptochrome 1 and phytochrome B is shown by the analysis of phyA, phyB, and hy4 simple, double, and triple mutants in Arabidopsis. Plant Physiol. 118: 19-25.
10. Chory, J. and Peto, C.A. (1990) Mutations in the DET1 gene affect cell-type-specific expression of light-regulated genes and chloroplast development in Arabidopsis. Proc. Natl Acad. Sci. USA 87: 8776-8780.
11. Chory, J., Peto, C., Feinbaum, R., Pratt, L. and Ausubel, F. (1989) Arabidopsis thaliana mutant that develops as a light-grown plant in the absence of light. Cell 58: 991-999.
12. De Simone, S., Oka, Y. and Inoue, Y. (2000b) Effect of light on root hair formation in Arabidopsis thaliana phytochrome-deficient mutants. J. Plant Res. 113: 63-69.
13. De Simone, S., Oka, Y., Nishioka, N., Tadano, S. and Inoue, Y. (2000a) Evidence of phytochrome mediation in the low-pH-induced root hair formation process in lettuce (Lactuca sativa L. cv. Grand Rapids) seedlings. J. Plant Res. 113: 45-53.
14. Deng, X.W. and Quail, P.H. (1992) Genetic and phenotypic characterization of cop1 mutants of Arabidopsis thaliana. Plant J. 2: 83-95.
15. Devlin, P.F. and Kay, S.A. (2000) Cryptochromes are required for phytochrome signaling to the circadian clock but not for rhythmicity. Plant Cell 12: 2499-2509.
16. Feldman, L.J. (1984) Regulation of root development. Annu. Rev. Plant Physiol. 35: 223-242.
17. Flores, H.E., Dai, Y., Cuello, J.L., Maldonado-Mendoza, I.E. and Loyola-Vargas, V.M. (1993) Green roots: photosynthesis and photoautotrophy in an underground plant organ. Plant Physiol. 101: 363-371.
18. Gill, A.M. and Tomlinson, P.B. (1977) Studies of the growth of red mangrove (Rhizophora mangle L.) 4: the adult root system. Biotropica 9: 145-155.
19. Hardtke, C.S. and Deng, X.W. (2000) The cell biology of the COP/DET/FUS proteins. Regulating proteolysis in photomorphogenesis and beyond? Plant Physiol. 124: 1548-1557.
20. Hayashi, M., Toriyama, K., Kondo, M., Hara-Nishimura, I. and Nishimura, M. (1999) Accumulation of a fusion protein containing 2S albumin induces novel vesicles in vegetative cells of Arabidopsis. Plant Cell Physiol. 40: 263-272.
21. Jarillo, J.A., Capel, J., Tang, R.H., Yang, H.Q., Alonso, J.M., Ecker, J.R. and Cashmore, A.R. (2001) An Arabidopsis circadian clock component interacts with both CRY1 and phyB. Nature 410: 487-490.
22. Koornneef, M., Hanhart, C.J. and Van Der Veen, J.H. (1991) A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana. Mol. Gen. Genet. 229: 57-66.
23. Koornneef, M., Rolff, E. and Spruit, C.I.R (1980) Genetic control of light-inhibited hypocotyl elongation in Arabidopsis thaliana (L.) Heynh. Z. Pflanzenphysiol. 100: 147-160.
24. Koski, V.M., French, C.S. and Smith, J.H.C. (1951) The action spectrum for the transformation of protochlorophyll to chlorophyll a in normal and albino corn seedlings. Arch. Biochem. Biophys. 31: 1-17.
25. Lifschitz, S., Gepstein, S. and Horwitz, B.A. (1990) Phytochrome regulation of greening in wild type and long-hypocotyl mutants of Arabidopsis thaliana. Planta 181: 234-238.
26. Lin, C.T. (2000) Plant blue-light receptors. Trends Plant Sci. 5: 337-342.
27. Lin, C.T. (2002) Blue light receptors and signal transduction. Plant Cell 14: S207-S225.
28. Lin, C.T., Robertson, D.E., Ahmad, M., Raibekas, A.A., Jorns, M.S., Dutton, P.L. and Cashmore, A.R. (1995) Association of flavin adenine-dinucleotide with the Arabidopsis blue-light receptor cry1. Science 269: 968-970.
29. Ma, L.G., Li, J.M., Qu, L.J., Hager, J., Chen, Z.L., Zhao, H.Y. and Deng, X.W. (2001) Light control of Arabidopsis development entails coordinated regulation of genome expression and cellular pathways. Plant Cell 13: 2589-2607.
30. Más, P., Devlin, P.F., Panda, S. and Kay, S.A. (2000) Functional interaction of phytochrome B and cryptochrome 2. Nature 408: 207-211.
31. Mancinelli, A.L. (1994) The physiology of phytochrome action. In Photomorphogenesis in Plants, 2nd Edition. Edited by Kendrick, R.E. and Kronenberg, G.H.M. pp. 211-269. Kluwer Academic Publishers, Dordrecht, The Netherlands.
32. Matsushita, T., Mochizuki, N. and Nagatani, A. (2003) Dimers of the N-terminal domain of phytochrome B are functional in the nucleus. Nature 424: 571-574.
33. Mohr, H. (1994) Coaction between pigment systems. In Photomorphogenesis in Plants, 2nd Edition. Edited by Kendrick, R.E. and Kronenberg, G.H.M. pp. 353-373. Kluwer Academic Publishers, Dordrecht, The Netherlands.
34. Moran, R. (1982) Formulas for determination of chlorophyllous pigments extracted with N, N-dimethylformamide. Plant Physiol. 69: 1376-1381.
35. Nagatani, A., Kendrick, R.E., Koornneef, M. and Furuya, M. (1989) Partial characterization of phytochrome-I and phytochrome-II in etiolated and de-etiolated tissues of a photomorphogenetic mutant (Lh) of cucumber (Cucumis sativus L) and its isogenic wild type. Plant Cell Physiol. 30: 685-690.
36. Nagatani, A., Reed, J.W. and Chory, J. (1993) Isolation and initial characterization of Arabidopsis mutants that are deficient in phytochrome A. Plant Physiol. 102: 269-277.
37. Neff, MM. and Chory, J. (1998) Genetic interactions between phytochrome A, phytochrome B, and cryptochrome 1 during Arabidopsis development. Plant Physiol. 118: 27-35.
38. Neff, M.M., Fankhauser, C. and Chory, J. (2000) Light: an indicator of time and place. Genes Dev. 14: 257-271.
39. Oyama, T., Shimura, Y. and Okada, K. (1997) The Arabidopsis HY5 gene encodes a bZIP protein that regulates stimulus-induced development of root and hypocotyl. Genes Dev. 11: 2983-2995.
40. Pepper, A.E. and Chory, J. (1997) Extragenic suppressors of the Arabidopsis det1 mutant identify elements of flowering-time and light-response regulatory pathways. Genetics 145: 1125-1137.
41. Poppe, C., Sweere, U., Drumm-Herrel, H. and Schäfer, E. (1998) The blue light receptor cryptochrome 1 can act independently of phytochrome A and B in Arabidopsis thaliana. Plant J. 16: 465-471.
42. Pratt, L.H. and Coleman, R.A. (1974) Phytochrome distribution in etiolated grass seedlings as assayed by an indirect antibody-labelling method. Amer. J. Bot. 61: 195-202.
43. Quail, P.H. (2002) Photosensory perception and signalling in plant cells: new paradigms? Curr. Opin. Cell Biol. 14: 180-188.
44. Reed, J.W., Nagpal, P., Poole, D.S., Furuya, M. and Chory, J. (1993) Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. Plant Cell 5: 147-157.
45. Sakai, T., Wada, T., Ishiguro, S. and Okada, K. (2000) RPT2: A signal transducer of the phototropic response in Arabidopsis. Plant Cell 12: 225-236.
46. Schroeder, D.F., Gahrtz, M., Maxwell, B.B., Cook, R.K., Kan, J.M., Alonso, J.M., Ecker, J.R. and Chory, J. (2002) De-etiolated 1 and damaged DNA binding protein I interact to regulate Arabidopsis photomorphogenesis. Curr. Biol. 12: 1462-1472.
47. Shinomura, T., Nagatani, A., Hanzawa, H., Kubota, M., Watanabe, M. and Furuya, M. (1996) Action spectra for phytochrome A- and B-specific photoinduction of seed germination in Arabidopsis thaliana. Proc. Natl Acad. Sci. USA 93: 8129-8133.
48. Somers, D.E. and Quail, P.H. (1995) Temporal and spatial expression patterns of PHYA and PHYB genes in Arabidopsis. Plant J. 7: 413-427.
49. Sullivan, J.A. and Deng, X.W. (2003) From seed to seed: the role of photoreceptors in Arabidopsis development. Dev. Biol. 260: 289-297.
50. Tóth, R., Kevei, É., Hall, A., Millar, A.J., Nagy, F. and Kozma-Bognár, L. (2001) Circadian clock-regulated expression of phytochrome and cryptochrome genes in Arabidopsis. Plant Physiol. 127; 1607-1616.
51. Wang, H.Y., Ma, L.G., Li, J.M., Zhao, H.Y. and Deng, X.W. (2001) Direct interaction of Arabidopsis cryptochromes with COP1 in light control development. Science 294: 154-158.
52. Wang, X.J. and Iino, M. (1998) Interaction of cryptochrome I, phytochrome, and ion fluxes in blue-light-induced shrinking of Arabidopsis hypocotyl protoplasts. Plant Physiol. 117: 1265-1279.
53. Wertz, I.E., O'rourke, K.M., Zhang, Z., Dornan, D., Arnott, D., Deshaies, R.J. and Dixit, V.M. (2004) Human De-etiolated-1 regulates c-Jun by assembling a CUL4A ubiquitin ligase. Science 303: 1371-1374.
54. Whatley, J.M. (1983) The ultrastructure of plastids in roots. Int. Rev. Cytol. 85: 175-220.
55. Yang, H.Q., Tang, R.H. and Cashmore, A.R. (2001) The signaling mechanism of Arabidopsis CRY1 involves direct interaction with COP1. Plant Cell 13: 2573-2587.
56. Yang, H.Q., Wu, Y.J., Tang, R.H., Liu, D.M., Liu, Y and Cashmore, A.R. (2000) The C termini of Arabidopsis cryptochromes mediate a constitutive light response. Cell 103: 815-827.