Pulsed origination and extinction in the marine realm

Paleobiology

Volumn 31, Issue 1, 2005, Pages 6-20

  Foote, Michael ^a  

^a UNIVERSITY OF CHICAGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EVOLUTION; EXTINCTION; MARINE ENVIRONMENT; PALEOBIOLOGY; TURNOVER;

ANIMALIA;

EID: 12344318396     PISSN: 00948373     EISSN: None     Source Type: Journal    
DOI: 10.1666/0094-8373(2005)031<0006:POAEIT>2.0.CO;2     Document Type: Article

References (55)

1. Akaike, H. 1973. Information theory and an extension of the maximum likelihood principle. Pp 267-281 in B. N. Petrov and F. Csáki, eds. Second international symposium on information theory. Akadémiai Kiadó, Budapest.
2. Baumiller, T. K. 1996. Exploring the pattern of coordinated stasis: simulations and extinction scenarios. Palaeogeography, Palaeoclimatology, Palaeoecology 127:135-146.
3. Behrensmeyer, A. K., N. E. Todd, R. Potts, and G. E. McBrinn. 1997. Late Pliocene faunal turnover in the Turkana Basin, Kenya and Ethiopia. Science 278:1589-1594.
4. Bowring, S. A., D. H. Erwin, Y. G. Jin, M. W. Martin, D. Davidek, and W. Wang. 1998. U/Pb zircon geochronology and tempo of the end-Permian mass extinction. Science 280:1039-1043.
5. Brett, C. E., and G. C. Baird. 1995. Coordinated stasis and evolutionary ecology of Silurian to Middle Devonian faunas in the Appalachian Basin. Pp. 285-315 in D. H. Erwin and R. L. Anstey, eds. New approaches to speciation in the fossil record. Columbia University Press, New York.
6. Burnham, K. P., and D. R. Anderson. 1998. Model selection and inference: a practical information-theoretic approach. Springer, New York.
7. Byrd, R. H., P. Lu, J. Nocedal, and C. Zhu. 1995. A limited memory algorithm for bound constrained optimization. SIAM Journal on Scientific Computing 16:1190-1208.
8. Connolly, S. R., and A. I. Miller. 2001a. Joint estimation of sampling and turnover rates from fossil databases: capture-mark-recapture methods revisited. Paleobiology 27:751-767.
9. Connolly, S. R., and A. I. Miller. 2001b. Global Ordovician faunal transitions in the marine benthos: proximate causes. Paleobiology 27:779-795.
10. Connolly, S. R., and A. I. Miller. 2002. Global Ordovician faunal transitions in the marine benthos: ultimate causes. Paleobiology 28:26-40.
11. Conroy, M. J., and J. D. Nichols. 1984. Testing for variation in taxonomic extinction probabilities: a suggested methodology and some results. Paleobiology 10:328-337.
12. Cooper, R. A., J. S. Crampton, J. I. Raine, F. M. Gradstein, H. E. G. Morgans, P. M. Sadler, C. P. Strong, D. Waghorn, and G. J. Wilson. 2001. Quantitative biostratigraphy of the Taranaki Basin, New Zealand: a deterministic and probabilistic approach. AAPG Bulletin 85:1469-1498.
13. Dowsett, H. J. 1989. Application of the graphic correlation method to Pliocene marine sequences. Marine Micropaleontology 14:3-32.
14. Elder, W. P. 1989. Molluscan extinction patterns across the Cenomanian-Turonian stage boundary in the Western Interior of the United States. Paleobiology 15:299-320.
15. Foote, M. 1988. Survivorship analysis of Cambrian and Ordovician trilobites. Paleobiology 14:258-271.
16. Foote, M. 2001. Inferring temporal patterns of preservation, origination, and extinction from taxonomic survivorship analysis. Paleobiology 27:602-630.
17. Foote, M. 2003a. Origination and extinction through the Phanerozoic: a new approach. Journal of Geology 111:125-148.
18. Foote, M. 2003b. Erratum. Journal of Geology 111:752-753.
19. Gilinsky, N. L., and R. K. Bambach. 1987. Asymmetrical patterns of origination and extinction in higher taxa. Paleobiology 13: 427-445.
20. Hallam, A., and P. B. Wignall. 1999. Mass extinctions and sea-level changes. Earth-Science Reviews 48:217-250.
21. Hayek, L. C., and E. Bura. 2001. On the ends of the taxon range problem. Pp. 221-244 in J. B. C. Jackson, S. Lidgard, and F. K. McKinney, eds. Evolutionary patterns: growth, form, and tempo in the fossil record. University of Chicago Press, Chicago.
22. Holland, S. M. 1995. The stratigraphic distribution of fossils. Paleobiology 21:92-109.
23. Holland, S. M. 1996. Recognizing artifactually generated coordinated stasis: implications of numerical models and strategies for field tests. Palaeogeography, Palaeoclimatology, Palaeoecology 127:147-156.
24. Holland, S. M. 2000. The quality of the fossil record: a sequence-stratigraphic perspective. In D. H. Erwin and S. L. Wing, eds. Deep time: Paleobiology's perspective. Paleobiology 26(Suppl. to No. 4):148-168.
25. Holland, S. M. 2003. Confidence limits on fossil ranges that account for facies changes. Paleobiology 29:468-479.
26. Hurvich, C. M., and C.-L. Tsai. 1989. Regression and time series model selection in small samples. Biometrika 76:297-307.
27. Ihaka, R., and R. Gentleman. 1996. R: a language for data analysis and graphics. Journal of Computational and Graphical Statistics 5:299-314.
28. Jackson, J. B. C., and K. G. Johnson. 2000. Life in the last few million years. In D. H. Erwin and S. L Wing, eds. Deep time: Paleobiology's perspective. Paleobiology 26(Suppl. to No. 4): 221-235.
29. Jin, Y. G., Y. Wang, W. Wang, Q. H. Shang, C. Q. Cao, and D. H. Erwin. 2000. Pattern of marine mass extinction near the Permian-Triassic boundary in south China. Science 289:432-436.
30. Kemple, W. G., P. M. Sadler, and D. J. Strauss. 1995. Extending graphic correlation to many dimensions: stratigraphic correlation as constrained optimization. In K. O. Mann and H. R. Lane, eds. Graphic correlation. SEPM Special Publication 53: 65-82. SEPM, Tulsa, Okla.
31. Kidwell, S. M., and S. M. Holland. 2002. The quality of the fossil record: implications for evolutionary analyses. Annual Review of Ecology and Systematics 33:561-588.
32. Mann, K. O., and H. R. Lane, eds. 1995. Graphic correlation. SEPM Special Publication 53. SEPM, Tulsa, Okla.
33. Marshall, C. R. 1997. Confidence intervals on stratigraphic ranges with nonrandom distributions of fossil horizons. Paleobiology 23:165-173.
34. Marshall, C. R., and P. D. Ward. 1996. Sudden and gradual molluscan extinctions in the latest Cretaceous of western European Tethys. Science 274:1360-1363.
35. Miller, A. I. 1998. Biotic transitions in global marine diversity. Science 281:1157-1160.
36. Newell, N. D. 1967. Revolutions in the history of life. Geological Society of America Special Paper 89:63-91.
37. Newman, M. E. J., and R. G. Palmer. 2003. Modeling extinction. Oxford University Press, Oxford.
38. Nichols, J. D., and K. H. Pollock. 1983. Estimating taxonomic diversity, extinction rates, and speciation rates from fossil data using capture-recapture models. Paleobiology 9:150-163.
39. Peters, S. E., and M. Foote. 2002. Determinants of extinction in the fossil record. Nature 416:420-424.
40. Press, W. H., S. A. Teukolsky, W. T. Vetterling, and B. P. Flannery. 1992. Numerical recipes in C, 2d ed. Cambridge University Press, Cambridge.
41. Raup, D. M. 1979. Biases in the fossil record of species and genera. Bulletin of the Carnegie Museum of Natural History 13: 85-91.
42. Raup, D. M. 1989. The case for extraterrestrial causes of extinction. Philosophical Transactions of the Royal Society of London B 325:421-431.
43. Raup, D. M. 1991. A kill curve for Phanerozoic marine species. Paleobiology 17:37-48.
44. Raup, D. M. 1996. Extinction models. Pp. 419-433 in D. Jablonski, D. H. Erwin, and J. H. Lipps, eds. Evolutionary paleobiology. University of Chicago Press, Chicago.
45. Raup, D. M., and G. E. Boyajian. 1988. Patterns of generic extinction in the fossil record. Paleobiology 14:109-125.
46. Raup, D. M., and J. J. Sepkoski Jr. 1982. Mass extinctions in the marine fossil record. Science 215:1501-1503.
47. Raup, D. M., and J. J. Sepkoski Jr. 1984. Periodicity of extinctions in the geologic past. Proceedings of the National Academy of Sciences USA 81:801-805.
48. Sadler, P. M., and R. A. Cooper. 2003. Best-fit intervals and consensus sequences: comparison of the resolving power of traditional biostratigraphy and computer-assisted correlation. Pp. 49-94 in P. J. Harries, ed. High-resolution approaches in stratigraphic paleontology. Kluwer, Dordrecht, The Netherlands.
49. Sepkoski, J. J., Jr. 1998. Rates of speciation in the fossil record. Philosophical Transactions of the Royal Society of London B 353:315-326.
50. Sepkoski, J. J., Jr. 2002. A compendium of fossil marine animal genera. Bulletins of American Paleontology 363:1-560.
51. Smith, A. B., A. S. Gale, and N. E. A. Monks. 2001. Sea-level change and rock-record bias in the Cretaceous: a problem for extinction and biodiversity studies. Paleobiology 27:241-253.
52. Strauss, D., and P. M. Sadler. 1989. Classical confidence intervals and Bayesian probability estimates for ends of local taxon ranges. Mathematical Geology 21:411-427.
53. Van Valen, L. M. 1984. A resetting of Phanerozoic community evolution. Nature 307:50-52.
54. Vrba, E. S. 1985. Environment and evolution: alternative causes of the temporal distribution of evolutionary events. South African Journal of Science 81:229-236.
55. Wang, S. C. 2003. On the continuity of background and mass extinction. Paleobiology 29:455-467.