메뉴 건너뛰기




Volumn 20, Issue SUPPL. 1, 2004, Pages

Predicting protein-peptide interactions via a network-based motif sampler

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; AMINO ACID SEQUENCE; CONFERENCE PAPER; MATHEMATICAL GENETICS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN INTERACTION; SENSITIVITY AND SPECIFICITY; YEAST;

EID: 12144276041     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bth922     Document Type: Conference Paper
Times cited : (36)

References (20)
  • 2
    • 0034724569 scopus 로고    scopus 로고
    • SH3-spot: An algorithm to predict preferred ligands of different members of the SH3 gene family
    • Brannetti, B. Via, A., Cestra, G., Cesareni, G. and Helmer-Citterich, M. (2000) SH3-spot: an algorithm to predict preferred ligands of different members of the SH3 gene family. J. Mol. Biol., 298, 313-328.
    • (2000) J. Mol. Biol. , vol.298 , pp. 313-328
    • Brannetti, B.1    Via, A.2    Cestra, G.3    Cesareni, G.4    Helmer-Citterich, M.5
  • 4
    • 0033950079 scopus 로고    scopus 로고
    • The importance of being proline: The interaction of proline-rich motifs in signaling proteins with their cognate domains
    • Kay, B.K., Williamson, M.P. and Sudol, M. (2000). The importance of being proline: the interaction of proline-rich motifs in signaling proteins with their cognate domains. FASEB J., 14, 231-241.
    • (2000) FASEB J. , vol.14 , pp. 231-241
    • Kay, B.K.1    Williamson, M.P.2    Sudol, M.3
  • 5
    • 0027912333 scopus 로고
    • Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
    • Lawrence, C.E., Altschul, S.F., Boguski, M.S., Liu, J.S., Neuwoald, A.F. and Wootton, J.C. (1993) Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science, 262, 208-214.
    • (1993) Science , vol.262 , pp. 208-214
    • Lawrence, C.E.1    Altschul, S.F.2    Boguski, M.S.3    Liu, J.S.4    Neuwoald, A.F.5    Wootton, J.C.6
  • 7
    • 84950424966 scopus 로고
    • Bayesian models for multiple local sequence alignment and Gibbs sampling strategies
    • Liu, J.S., Neuwald, A.F. and Lawrence, C.E. (1995) Bayesian models for multiple local sequence alignment and Gibbs sampling strategies. J. Am. Stat. Assoc., 90, 1156-1170.
    • (1995) J. Am. Stat. Assoc. , vol.90 , pp. 1156-1170
    • Liu, J.S.1    Neuwald, A.F.2    Lawrence, C.E.3
  • 8
    • 0035030510 scopus 로고    scopus 로고
    • SH3 domains: Complexity in moderation
    • Mayer, B.J. (2001) SH3 domains: complexity in moderation. J. Cell Sci., 114, 1253-1263.
    • (2001) J. Cell Sci. , vol.114 , pp. 1253-1263
    • Mayer, B.J.1
  • 10
    • 0042622251 scopus 로고    scopus 로고
    • Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs
    • Obenauer, J.C., Cantky, L.C. and Yaffe, M.B. (2003) Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs. Nucleic Acids Res., 31, 3635-3641.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3635-3641
    • Obenauer, J.C.1    Cantky, L.C.2    Yaffe, M.B.3
  • 11
    • 0029789461 scopus 로고    scopus 로고
    • Searching databases of conserved sequence regions by aligning protein multiple-alignments
    • Pietrokovski, S. (1996) Searching databases of conserved sequence regions by aligning protein multiple-alignments. Nucleic Acids Res., 24, 3836-3845.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3836-3845
    • Pietrokovski, S.1
  • 12
    • 0025008168 scopus 로고
    • Sequence logos: A new way to display consensus sequences
    • Schneider, T.D. and Stephens, R.M. (1990) Sequence logos: a new way to display consensus sequences. Nucleic Acids Res., 18, 6097-6100.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6097-6100
    • Schneider, T.D.1    Stephens, R.M.2
  • 15
    • 0029906607 scopus 로고    scopus 로고
    • Dirichlet mixtures: A method for improved detection of weak but significant protein sequence homology
    • Sjolander, K., Karplus, K., Brown, M., Hughey, R., Krough, A., Mian, I.S. and Haussler, D. (1996) Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology. Comput. Appl. Bio Sci., 12, 327-345.
    • (1996) Comput. Appl. BioSci. , vol.12 , pp. 327-345
    • Sjolander, K.1    Karplus, K.2    Brown, M.3    Hughey, R.4    Krough, A.5    Mian, I.S.6    Haussler, D.7
  • 16
    • 24744466096 scopus 로고    scopus 로고
    • A neural network approach for studying the relationship between protein sequences and protein-protein interactions
    • Edmonton, Canada
    • Chang, R. and Page, D. (2002) A neural network approach for studying the relationship between protein sequences and protein-protein interactions. In ISMB2002, Edmonton, Canada.
    • (2002) ISMB2002
    • Chang, R.1    Page, D.2
  • 17
    • 0034704216 scopus 로고    scopus 로고
    • New wrinkles for an old domain
    • Sudol, M. and Hunter, T. (2000) New wrinkles for an old domain. Cell, 103, 1001-1004.
    • (2000) Cell , vol.103 , pp. 1001-1004
    • Sudol, M.1    Hunter, T.2
  • 19
    • 0034124939 scopus 로고    scopus 로고
    • Systematic and large-scale two-hybrid screens
    • Uetz, P. and Hughes, R. (2000) Systematic and large-scale two-hybrid screens. Curr. Opin. Microbiol., 3, 303-308.
    • (2000) Curr. Opin. Microbiol. , vol.3 , pp. 303-308
    • Uetz, P.1    Hughes, R.2
  • 20
    • 0013033597 scopus 로고    scopus 로고
    • The structure and function of proline recognition domains
    • Zarrinpar, A., Bhattacharyya, R.P. and Lim, W.A. (2003) The structure and function of proline recognition domains. Sci. STKE, 179, RE8.
    • (2003) Sci. STKE , vol.179
    • Zarrinpar, A.1    Bhattacharyya, R.P.2    Lim, W.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.