HLA alleles and haplotypes among the lakota sioux: Report of the ASHI minority workshops, part III

Human Immunology

Volumn 65, Issue 1, 2004, Pages 78-89

  Leffell, Mary S ^a   Fallin, M Daniele ^b   Hildebrand, William H ^c   Cavett, Joshua W ^c   Iglehart, Brian A ^a   Zachary, Andrea A ^a  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b JOHNS HOPKINS UNIVERSITY   (United States)

^c UNIVERSITY OF OKLAHOMA   (United States)

Author keywords

American Indian; HLA alleles; HLA haplotypes; Lakota Sioux; Native American

Indexed keywords

HLA A ANTIGEN; HLA ANTIGEN CLASS 1; HLA ANTIGEN CLASS 2; HLA B ANTIGEN; HLA C ANTIGEN; HLA DQB1 ANTIGEN; HLA DR ANTIGEN;

ALLELE; AMERICAN INDIAN; CONFERENCE PAPER; ETHNOLOGY; FAMILY; GENE ASSIGNMENT; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENOTYPE; HAPLOTYPE; HISTOCOMPATIBILITY GENE; HUMAN; IMMUNOGENETICS; MAXIMUM LIKELIHOOD METHOD; PREVALENCE; PRIORITY JOURNAL; STATISTICAL SIGNIFICANCE;

EID: 1142309890     PISSN: 01988859     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.humimm.2003.10.001     Document Type: Conference Paper

References (36)

1. Pritzker BM: The Great Plains. In: A Native American Encyclopedia. History, Culture and Peoples. New York: Oxford University Press, Inc., 2000.
2. LeBeau S: Tribal history. Wakpa Waste Oyanke (The Good River Reservation). Cheyenne River Sioux Tribe historical information. http://www.sioux.org/historical.html. Accessed August 14, 2002.
3. The Pine Ridge Reservation Project. Demographics, geography and reality. http.//www.pineridgerez.net/overview.php. Accessed July 23, 2002.
4. Breault J.L., Hoffman M.G. A strategy for reducing tuberculosis among Ogala Sioux Native Americans. Am J Preventive Med. 13:1997;182.
5. Berinstein D.M., Stahn R.M., Welty T.K., Leonardson G.R., Herlihy J.J. The prevalence of diabetic retinopathy and associated risk factors among Sioux Indians. Diabetes Care. 20:1997;757.
6. Stahn R.M., Gohdes D., Valway S.E. Diabetes and its complications among selected tribes in North Dakota, South Dakota, and Nebraska. Diabetes Care. 16:1993;244.
7. Shaw F.E., Shapiro C.N., Welty T.K., Dill W., Reddington J., Hadler S.C. Hepatitis transmission among the Sioux Indians of South Dakota. Am J Public Health. 80:1990;1091.
8. Narva A.S. The spectrum of kidney disease in American Indians. Kidney International. 63:2003;S3.
9. Scholl S., Budowle B., Radecki K., Salvo M. Navajo, Pueblo, and Sioux population data on the loci HLA-DQA1, LDLR, GYPA, HBGG, D7S8, Gc, and D1S80. J Forensic Sciences. 41:1996;47.
10. Zachary A.A., Bias W.B., Johnson A., Rose S.M., Leffell M.S. Antigen, allele and haplotype frequencies. Report of the ASHI Minority Antigens Workshops Part I, African Americans . Human Immunol. 62:2001;1127.
11. Leffell M.S., Fallin D.M., Erlich H.A., Fernandez-Vina M., Hildebrand W.H., Mack S.J., Zachary A.A. HLA antigens, alleles and haplotypes among the Yup'ik Alaska Natives Report of the ASHI Minority Workshops, Part II . Human Immunol. 63:2002;614.
12. U.S. Census Bureau, Census 1990. American Indian population by selected tribes.1990. http://censtats.census.gov. Accessed on July 22, 2002.
13. U.S. Census Bureau, Census 2000. Profile of general demographic characteristics.2000. Geographic area: Cheyenne River Reservation and off-reservation trust land, SD. Geographic area: Pine Ridge Reservation and off-reservation trust land, SD. http://censtats.census.gov. Accessed on April 18, 2003.
14. Bignon JD, Fernandez-Vina MA: Protocols of the 12th International Histocompatibility Workshop for typing of HLA class II alleles by DNA amplification by the polymerase chain reaction (PCR) and hybridization with sequence specific oligonucleotide probes (SSOP). In Charon D (ed): Genetic Diversity of HLA: Functional and Medical Implications. Proceedings of the Twelfth International Histocompatibility Workshop and Conference. Paris: EDK, 1997.
15. Marsh S.G.E. Nomenclature for factors of the HLA System, update April 1999. Tissue Antigens. 54:1999;209.
16. Marsh S.G.E. Nomenclature for factors of the HLA System, update July/August 1999. Tissue Antigens. 54:1999;531.
17. Marsh S.G.E. Nomenclature for factors of the HLA System, update July 2000. Hum Immunol. 61:2000;1053.
18. Schneider S., Roessli D., Excoffier L. Arlequin ver. 2.000 a software for population genetics data analysis . 2000;Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland.
19. Zachary A.A., Steinberg A.G., Bias W.B., Leffell M.S. The frequencies of HLA alleles and haplotypes and their distribution among donors and renal patients in the UNOS Registry. Transplantation. 62:1996;272.
20. Leffell M.S., Steinberg A.G., Bias W.B., Machan C.H., Zachary A.A. The distribution of HLA antigens and phenotypes among donors and patients in the UNOS registry. Transplantation. 58:1994;1119.
21. Marsh S.G.E., Albert E.D., Bodmer W.F., Bontrop R.E., Dupont B., Erlich H.A., Hansen J.A., Mach B., Mayr W.R., Parham P., Petersdorf E.W., Sasazuki T., Schreuder G.M.T., Strominger J.L., Svejgaard A., Terasaki P.I. Nomenclature for factors of the HLA system, 2002. Hum Immunol. 63:2002;1213.
22. Cadavid L.F., Watkins D.I. Heirs of the jaguar and the anaconda HLA, conquest and disease in the indigenous populations of the Americas . Tissue Antigens. 50:1997;702.
23. Erlich HA, Mack SJ, Bergström, Gyllenstein UB: HLA class II alleles in Amerindian populations: implications for the evolution of HLA polylmorphism and the colonization of the Americas. Hereditas 127:19,1997.
24. Parham P., Arnett K.L., Adams E.J., Little A.M., Tees K., Barber L.D., Marsh S.G., Ohta T., Markow T., Petzl-Erler M.L. Episodic evolution and turnover of HLA-B in the indigenous human populations of the Americas. Tissue Antigens. 50:1997;219.
25. Fernández-Viña M.A., Lázaro A.M., Marcos C.Y., Nulf C., Raimondi E., Haas E.J., Stastny P. Dissimilar evolution of B-locus compared to A-locus and class II loci of of the HLA region in South American Indian tribes. Tissue Antigens. 50:1997;233.
26. Williams T.M., Wu J., Foutz T., McAuley J.D., Troup G.M. A new DRB1 allele (DRB1*0811) identified in Native Americans. Immunogenetics. 40:1994;314.
27. Smith A.G., Nelson J.L., Regen L., Guthrie L.A., Donadi E., Mickelson E.M., Hansen J.A. Six new DR52-associated DRB1 alleles, three of DR8, two of DR11, and one of DR6, reflect a variety of mechanisms which generate polymorphism in the MHC. Tissue Antigens. 48:1996;118.
28. Chen D.S., Tang T.S., Pulyaeva H., Slack R., Tu B., Wagage D., Li L., Perle L., Ng J., Hartzman R.J., Hurley C.K. Relative HLA-DRB1*04 allele frequencies in five United States populations found in a hematopoietic stem cell volunteer donor registry and seven new DRB1*04 alleles. Hum Immunol. 63:2002;665.
29. Trachtenberg E.A., Keyeux G., Bernal J.E., Rhodas M.C., Erlich H.A. Results of expedicion humana. I. Analysis of HLA class II (DRB1-DQA1-DPB1) alleles and DR-DQ haplotypes in nine Amerindian populations from Columbia. Tissue Antigens. 48:1996;174.
30. Yunis J.J., Ossa H., Salazar M., Delgado M.B., Deulofeut R., de la Hoz A., Bing D.H., Ramos O., Yunis E.J., Yunis E.J. Major histocompatibility complex class II alleles and haplotypes and blood groups of four Amerindian tribes of northern Columbia. Hum Immunol. 41:1994;248.
31. Hollenbach J.A., Thomson G., Cao K., Fernández-Viña M.A., Erlich H.A., Bugawan T.L., Winkler C., Winter M., Klitz W. HLA diversity, differentiation and haplotype evolution in Mesoamerican natives. Hum Immunol. 62:2001;378.
32. Mori M., Beatty P.G., Graves M., Boucher K.M., Milford E.L. HLA gene and haplotype frequencies in the North American population the National Marrow Donor Program Donor Registry . Transplantation. 64:1997;1017.
33. Cao K., Hollenbach J., Shi X., Shi W., Chopek M., Fernández- Viña M. Analysis of the frequencies of HLA-A, B, and C alleles and haplotypes in the five major ethnic groups of the United States reveals high levels of diversity in these loci and contrasting distribution patterns in these populations. Hum Immunol. 62:2001;1009.
34. Alaez C., Infante E., Pujol J., Duran C., Navarro J.L., Gorodezky C. Molecular analysis of HLA-DRB1, DQA1, DQB1, DQ promoter polymorphism and extended class I/class II haplotypes in Seri Indians from Northwest Mexico. Tissue Antigens. 59:2002;388.
35. Tokunaga K., Ohashi J., Bannai M., Juji T. Genetic link between Asians and Native Americans evidence from HLA genes and haplotypes . Hum Immunol. 62:2001;1001.
36. Sette A., Newman M., Livingston B., McKinney D., Sidney J., Ishioka G., Tangri S., Alexander J., Fikes J., Chestnut R. Optimizing vaccine design for cellular processing, MHC binding and TCR recognition. Tissue Antigens. 59:2002;443.