메뉴 건너뛰기




Volumn 18, Issue SUPPL. 1, 2002, Pages

A tree kernel to analyse phylogenetic profiles

Author keywords

Gene function prediction; Kernel; Phylogenetic profile; Support vector machine; Tree

Indexed keywords

ALGORITHM; ARTIFICIAL INTELLIGENCE; BIOLOGICAL MODEL; CONFERENCE PAPER; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; MATHEMATICAL ANALYSIS; PHYLOGENY; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SIGNAL TRANSDUCTION; STATISTICAL MODEL; ARTICLE; AUTOMATED PATTERN RECOGNITION; COMPARATIVE STUDY; EVALUATION; GENETICS; METHODOLOGY; MOLECULAR EVOLUTION; VALIDATION STUDY;

EID: 11244331236     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/18.suppl_1.S276     Document Type: Conference Paper
Times cited : (107)

References (24)
  • 6
    • 0033636139 scopus 로고    scopus 로고
    • Support vector machine classification and validation of cancer tissue samples using microarray expression data
    • Furey, T.S., Duffy, N., Cristianini, N., Bednarski, D., Schummer, M. and Haussler, D. (2000) Support vector machine classification and validation of cancer tissue samples using microarray expression data. Bioinformatics, 16, 906-914.
    • (2000) Bioinformatics , vol.16 , pp. 906-914
    • Furey, T.S.1    Duffy, N.2    Cristianini, N.3    Bednarski, D.4    Schummer, M.5    Haussler, D.6
  • 7
    • 0001969211 scopus 로고    scopus 로고
    • Use of receiver operating characteristic (roc) analysis to evaluate sequence matching
    • Gribskov, M. and Robinson, N.L. (1996) Use of receiver operating characteristic (roc) analysis to evaluate sequence matching. Comput. Chem., 20, 25-33.
    • (1996) Comput. Chem. , vol.20 , pp. 25-33
    • Gribskov, M.1    Robinson, N.L.2
  • 9
    • 0034048878 scopus 로고    scopus 로고
    • A discrimitive framework for detecting remote protein homologies
    • Jaakkola, T., Diekhans, M. and Haussler, D. (2000) A discrimitive framework for detecting remote protein homologies. J. Comput. Biol., 7, 95-114.
    • (2000) J. Comput. Biol. , vol.7 , pp. 95-114
    • Jaakkola, T.1    Diekhans, M.2    Haussler, D.3
  • 10
    • 0002714543 scopus 로고    scopus 로고
    • Making large-scale svm learning practical
    • Schölkopf, B., Burges, C. and Smola, A. (eds), MIT Press
    • Joachims, T. (1999) Making large-scale svm learning practical. In Schölkopf, B., Burges, C. and Smola, A. (eds), Advances in Kernel Methods-Support Vector Learning. MIT Press, pp. 169-184.
    • (1999) Advances in Kernel Methods-Support Vector Learning , pp. 169-184
    • Joachims, T.1
  • 12
    • 0036358995 scopus 로고    scopus 로고
    • The spectrum kernel: A string kernel for svm protein classification
    • Russ, B., Altman, A., Dunker, K., Hunter, L., Lauerdale, K. and Klein, T.E. (eds), World Scientific
    • Leslie, C., Eskin, E. and Noble, W.S. (2002) The spectrum kernel: a string kernel for svm protein classification. In Russ, B., Altman, A., Dunker, K., Hunter, L., Lauerdale, K. and Klein, T.E. (eds), Proceedings of the Pacific Symposium on Biocomputing 2002. World Scientific, pp. 564-575.
    • (2002) Proceedings of the Pacific Symposium on Biocomputing 2002 , pp. 564-575
    • Leslie, C.1    Eskin, E.2    Noble, W.S.3
  • 15
    • 0033523854 scopus 로고    scopus 로고
    • A combined algorithm for genome-wide prediction of protein function
    • November
    • Marcotte, E.M., Pellegrini, M., Thompson, M.J., Yeates, T.O. and Eisenberg, D. (November 1999) A combined algorithm for genome-wide prediction of protein function. Nature, 402, 83-86.
    • (1999) Nature , vol.402 , pp. 83-86
    • Marcotte, E.M.1    Pellegrini, M.2    Thompson, M.J.3    Yeates, T.O.4    Eisenberg, D.5
  • 18
  • 22
    • 0036366691 scopus 로고    scopus 로고
    • Support vector machine prediction of signal peptide cleavage site using a new class of kernels for strings
    • Altman, R.B., Dunker, A.K., Hunter, L., Lauerdale, K. and Klein, T.E. (eds), World Scientific
    • Vert, J.-P. (2002) Support vector machine prediction of signal peptide cleavage site using a new class of kernels for strings. In Altman, R.B., Dunker, A.K., Hunter, L., Lauerdale, K. and Klein, T.E. (eds), Proceedings of the Pacific Symposium on Biocomputing 2002. World Scientific, pp. 649-660.
    • (2002) Proceedings of the Pacific Symposium on Biocomputing 2002 , pp. 649-660
    • Vert, J.-P.1
  • 24
    • 0033670134 scopus 로고    scopus 로고
    • Engineering support vector machine kernels that recognize translation initiation sites
    • Zien, A., Ratsch, G., Mika, S., Scholkopf, B., Lengauer, T. and Muller, K.-R. (2000) Engineering support vector machine kernels that recognize translation initiation sites. Bioinformatics, 16, 799-807.
    • (2000) Bioinformatics , vol.16 , pp. 799-807
    • Zien, A.1    Ratsch, G.2    Mika, S.3    Scholkopf, B.4    Lengauer, T.5    Muller, K.-R.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.