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Volumn 88, Issue 1, 2005, Pages 392-403

Interhelical spacing in liquid crystalline spermine and spermidine-DNA precipitates

Author keywords

[No Author keywords available]

Indexed keywords

CHOLESTEROL; DNA; POLYAMINE DERIVATIVE; SODIUM CHLORIDE; SPERMIDINE; SPERMINE;

EID: 11244255348     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.104.040113     Document Type: Article
Times cited : (119)

References (49)
  • 3
    • 0018787524 scopus 로고
    • Spermine-DNA complexes build up metastable structures. Small-angle X-ray scattering and circular dichroism studies
    • Becker, M., R. Misselwitz, H. Damaschun, G. Damaschun, and D. Zirwer. 1979. Spermine-DNA complexes build up metastable structures. Small-angle X-ray scattering and circular dichroism studies. Nucleic Acids Res. 7:1297-1309.
    • (1979) Nucleic Acids Res. , vol.7 , pp. 1297-1309
    • Becker, M.1    Misselwitz, R.2    Damaschun, H.3    Damaschun, G.4    Zirwer, D.5
  • 6
    • 0141865625 scopus 로고    scopus 로고
    • Onset of DNA aggregation in presence of monovalent and multivalent counterions
    • Burak, Y., G. Ariel, and D. Andelman. 2003. Onset of DNA aggregation in presence of monovalent and multivalent counterions. Biophys. J. 85: 2100-2110.
    • (2003) Biophys. J. , vol.85 , pp. 2100-2110
    • Burak, Y.1    Ariel, G.2    Andelman, D.3
  • 8
    • 0004139057 scopus 로고    scopus 로고
    • Oxford University Press, New York, NY; Oxford, UK
    • Cohen. S. S. 1998. A Guide to the Polyamines. Oxford University Press, New York, NY; Oxford, UK.
    • (1998) A Guide to the Polyamines
    • Cohen, S.S.1
  • 9
    • 0018125214 scopus 로고
    • Study of DNA-spermine interactions by use of small-angle and wide-angle X-ray scattering and circular dichroism
    • Damaschun, H., G. Damaschun, M. Becker, E. Buder, R. Misselwitz, and D. Zirwer. 1978. Study of DNA-spermine interactions by use of small-angle and wide-angle X-ray scattering and circular dichroism. Nucleic Acids Res. 5:3801-3809.
    • (1978) Nucleic Acids Res. , vol.5 , pp. 3801-3809
    • Damaschun, H.1    Damaschun, G.2    Becker, M.3    Buder, E.4    Misselwitz, R.5    Zirwer, D.6
  • 10
    • 0026695481 scopus 로고
    • Sequestered end products and enzyme regulation: The case of ornithine decarboxylase
    • Davis, R. H., D. R. Morris, and P. Coffino. 1992. Sequestered end products and enzyme regulation: the case of ornithine decarboxylase. Microbiol. Rev. 56:280-290.
    • (1992) Microbiol. Rev. , vol.56 , pp. 280-290
    • Davis, R.H.1    Morris, D.R.2    Coffino, P.3
  • 11
    • 0000110880 scopus 로고
    • A study of the structure of highly concentrated phases of DNA by X-ray diffraction
    • Durand, D., J. Doucet, and F. Livolant. 1992. A study of the structure of highly concentrated phases of DNA by X-ray diffraction. J. Phys. II. (France) 2:1769-1783.
    • (1992) J. Phys. II. (France) , vol.2 , pp. 1769-1783
    • Durand, D.1    Doucet, J.2    Livolant, F.3
  • 12
    • 0000667012 scopus 로고    scopus 로고
    • Silver behenate powder as a possible low-angle calibration standard for small-angle neutron scattering
    • Gilles, R., U. Keiderling, and A. Wiedenmann. 1998. Silver behenate powder as a possible low-angle calibration standard for small-angle neutron scattering. J. Appl. Crystallogr. 31:957-959.
    • (1998) J. Appl. Crystallogr. , vol.31 , pp. 957-959
    • Gilles, R.1    Keiderling, U.2    Wiedenmann, A.3
  • 13
    • 0022881276 scopus 로고
    • The mechanism of the search for homology promoted by recA protein
    • Gonda, D. K., and C. M. Radding. 1986. The mechanism of the search for homology promoted by recA protein. J. Biol. Chem. 261:13087-13096.
    • (1986) J. Biol. Chem. , vol.261 , pp. 13087-13096
    • Gonda, D.K.1    Radding, C.M.2
  • 14
    • 0017238490 scopus 로고
    • Compact form of DNA induced by spermidine
    • Gosule, L. C., and J. A. Schellman. 1976. Compact form of DNA induced by spermidine. Nature. 259:333-335.
    • (1976) Nature , vol.259 , pp. 333-335
    • Gosule, L.C.1    Schellman, J.A.2
  • 15
    • 0035909970 scopus 로고    scopus 로고
    • Cryoelectron microscopy of λ phage DNA condensates in vitreous ice: The fine structure of DNA toroids
    • Hud, N. V., and K. H. Downing. 2001. Cryoelectron microscopy of λ phage DNA condensates in vitreous ice: the fine structure of DNA toroids. Proc. Natl. Acad. Sci. USA. 98:14925-14930.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 14925-14930
    • Hud, N.V.1    Downing, K.H.2
  • 16
    • 0033574205 scopus 로고    scopus 로고
    • Cyclization of globular DNA. Implications for DNA-DNA interactions in vivo
    • Jary, D., and J. L. Sikorav. 1999. Cyclization of globular DNA. Implications for DNA-DNA interactions in vivo. Biochemistry. 38:3223-3227.
    • (1999) Biochemistry , vol.38 , pp. 3223-3227
    • Jary, D.1    Sikorav, J.L.2
  • 17
    • 0020067542 scopus 로고
    • Catenation of DNA rings by topoisomerases
    • Krasnow, M. A., and N. R. Cozzarelli. 1982. Catenation of DNA rings by topoisomerases. J. Biol. Chem. 257:2687-2693.
    • (1982) J. Biol. Chem. , vol.257 , pp. 2687-2693
    • Krasnow, M.A.1    Cozzarelli, N.R.2
  • 18
    • 0034691030 scopus 로고    scopus 로고
    • DNA delivery by phage as a strategy for encapsulating toroidal condensates of arbitrary size into liposomes
    • Lambert, O., L. Letellier, W. M. Gelbart, and J. L. Rigaud. 2000. DNA delivery by phage as a strategy for encapsulating toroidal condensates of arbitrary size into liposomes. Proc. Natl. Acad. Sci. USA. 97:7248-7253.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 7248-7253
    • Lambert, O.1    Letellier, L.2    Gelbart, W.M.3    Rigaud, J.L.4
  • 19
    • 11244331520 scopus 로고    scopus 로고
    • Effect of mono- and multivalent salt on angle dependant attraction between charged rods
    • Lee, K.-C., I. Borukhov, W. M. Gelbart, A. J. Liu, and M. J. Stevens. 2004. Effect of mono- and multivalent salt on angle dependant attraction between charged rods. Phys. Rev. Lett. 93:128101.
    • (2004) Phys. Rev. Lett. , vol.93 , pp. 128101
    • Lee, K.-C.1    Borukhov, I.2    Gelbart, W.M.3    Liu, A.J.4    Stevens, M.J.5
  • 21
    • 0000373250 scopus 로고    scopus 로고
    • Monte Carlo simulation study of DNA polyelectrolyte properties in the presence of multivalent polyamine ions
    • Lyubartsev, A. P., and L. Nordenskiöld. 1997. Monte Carlo simulation study of DNA polyelectrolyte properties in the presence of multivalent polyamine ions. J. Phys. Chem. B. 101:4335-4342.
    • (1997) J. Phys. Chem. B , vol.101 , pp. 4335-4342
    • Lyubartsev, A.P.1    Nordenskiöld, L.2
  • 22
    • 0000959868 scopus 로고    scopus 로고
    • Reentrant condensation of DNA induced by multivalent counterions
    • Nguyen, T. T., I. Rouzina, and B. I. Shklovskii. 2000. Reentrant condensation of DNA induced by multivalent counterions. J. Chem. Phys. 112:2562-2568.
    • (2000) J. Chem. Phys. , vol.112 , pp. 2562-2568
    • Nguyen, T.T.1    Rouzina, I.2    Shklovskii, B.I.3
  • 23
    • 0035886073 scopus 로고    scopus 로고
    • Complexation of DNA with positive spheres: Phase diagram of charge inversion and reentrant condensation
    • Nguyen, T. T., and B. I. Shklovskii. 2001. Complexation of DNA with positive spheres: phase diagram of charge inversion and reentrant condensation. J. Chem. Phys. 115:7298-7308.
    • (2001) J. Chem. Phys. , vol.115 , pp. 7298-7308
    • Nguyen, T.T.1    Shklovskii, B.I.2
  • 25
    • 0017326868 scopus 로고
    • Polyamine induced aggregation of DNA
    • Osland, A., and K. Kleppe. 1977. Polyamine induced aggregation of DNA. Nucleic Acids Res. 1:685-695.
    • (1977) Nucleic Acids Res. , vol.1 , pp. 685-695
    • Osland, A.1    Kleppe, K.2
  • 26
    • 0029933808 scopus 로고    scopus 로고
    • DNA mesophases induced by spermidine: Structural properties and biological implications
    • Pelta, J., D. Durand, J. Doucet, and F. Livolant. 1996a. DNA mesophases induced by spermidine: structural properties and biological implications. Biophys. J. 71:48-63.
    • (1996) Biophys. J. , vol.71 , pp. 48-63
    • Pelta, J.1    Durand, D.2    Doucet, J.3    Livolant, F.4
  • 27
    • 0029975925 scopus 로고    scopus 로고
    • DNA aggregation induced by polyamines and cobalthexamine
    • Pelta, J., F. Livolant, and J. L. Sikorav. 1996b. DNA aggregation induced by polyamines and cobalthexamine. J. Biol. Chem. 271:5656-5662.
    • (1996) J. Biol. Chem. , vol.271 , pp. 5656-5662
    • Pelta, J.1    Livolant, F.2    Sikorav, J.L.3
  • 28
    • 0032819358 scopus 로고    scopus 로고
    • Spermine-induced aggregation of DNA, nucleosome, and chromatin
    • Raspaud, E., I. Chaperon, A. Leforestier, and F. Livolant. 1999. Spermine-induced aggregation of DNA, nucleosome, and chromatin. Biophys. J. 77: 1547-1555.
    • (1999) Biophys. J. , vol.77 , pp. 1547-1555
    • Raspaud, E.1    Chaperon, I.2    Leforestier, A.3    Livolant, F.4
  • 30
    • 0026558204 scopus 로고
    • Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Evidence for long range attractive hydration forces
    • Rau, D. C., and V. A. Parsegian. 1992. Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Evidence for long range attractive hydration forces. Biophys. J. 61:246-259.
    • (1992) Biophys. J. , vol.61 , pp. 246-259
    • Rau, D.C.1    Parsegian, V.A.2
  • 31
    • 0017332946 scopus 로고
    • Spermidine-desoxyribonucleic acid interactions in vitro and in Escherichia coli
    • Rubin, R. L. 1977. Spermidine-desoxyribonucleic acid interactions in vitro and in Escherichia coli. J. Bacteriol. 129:916-925.
    • (1977) J. Bacteriol. , vol.129 , pp. 916-925
    • Rubin, R.L.1
  • 32
    • 0035139069 scopus 로고    scopus 로고
    • Fourier transform Raman study of the structural specificities on the interaction between DNA and biogenic polyamines
    • Ruiz-Chica, J., M. A. Medina, F. Sánchez-Jiménez, and F. J. Ramírez. 2001. Fourier transform Raman study of the structural specificities on the interaction between DNA and biogenic polyamines. Biophys. J. 80:443-454.
    • (2001) Biophys. J. , vol.80 , pp. 443-454
    • Ruiz-Chica, J.1    Medina, M.A.2    Sánchez-Jiménez, F.3    Ramírez, F.J.4
  • 33
    • 0033596851 scopus 로고    scopus 로고
    • Ionic and structural specificity effects of natural and synthetic polyamines on the aggregation and resolubilization of single-, double-, and triple-stranded DNA
    • Saminathan, M., T. Antony, A. Shirahata, L. Sigal, T. Thomas, and T. J. Thomas. 1999. Ionic and structural specificity effects of natural and synthetic polyamines on the aggregation and resolubilization of single-, double-, and triple-stranded DNA. Biochemistry. 38:3821-3830.
    • (1999) Biochemistry , vol.38 , pp. 3821-3830
    • Saminathan, M.1    Antony, T.2    Shirahata, A.3    Sigal, L.4    Thomas, T.5    Thomas, T.J.6
  • 34
    • 0021749180 scopus 로고
    • X-ray diffraction studies on cation-collapsed DNA
    • Schellman, J. A., and N. Parthasarathy. 1984. X-ray diffraction studies on cation-collapsed DNA. J. Mol. Biol. 175:313-329.
    • (1984) J. Mol. Biol. , vol.175 , pp. 313-329
    • Schellman, J.A.1    Parthasarathy, N.2
  • 35
    • 0028059323 scopus 로고
    • A liquid crystalline phase in spermidine-condensed DNA
    • Sikorav, J. L., J. Pelta, and F. Livolant. 1994. A liquid crystalline phase in spermidine-condensed DNA. Biophys. J. 67:1387-1392.
    • (1994) Biophys. J. , vol.67 , pp. 1387-1392
    • Sikorav, J.L.1    Pelta, J.2    Livolant, F.3
  • 36
    • 0023986196 scopus 로고
    • Polyamine-DNA interactions. Condensation of chromatin and naked DNA
    • Smimov, I. V., S. I. Dimitrov, and V. L. Makarov. 1988. Polyamine-DNA interactions. Condensation of chromatin and naked DNA. J. Biomol. Struct. Dyn. 5:1149-1161.
    • (1988) J. Biomol. Struct. Dyn. , vol.5 , pp. 1149-1161
    • Smimov, I.V.1    Dimitrov, S.I.2    Makarov, V.L.3
  • 37
    • 0037113150 scopus 로고    scopus 로고
    • Phase diagram of dilute polyelectrolytes: Collapse and redissolution by association of counterions and co-ions
    • Solis, F. J. 2002. Phase diagram of dilute polyelectrolytes: collapse and redissolution by association of counterions and co-ions. J. Chem. Phys. 117:9009-9015.
    • (2002) J. Chem. Phys. , vol.117 , pp. 9009-9015
    • Solis, F.J.1
  • 38
    • 85033591358 scopus 로고    scopus 로고
    • Flexible linear polyelectrolytes in multivalent salt solutions: Solubility conditions
    • Solis, F. J., and M. Olvera de la Cruz. 2000. Flexible linear polyelectrolytes in multivalent salt solutions: solubility conditions. Eur. Phys. J. E. 1: 1-18.
    • (2000) Eur. Phys. J. E. , vol.1 , pp. 1-18
    • Solis, F.J.1    Olvera De La Cruz, M.2
  • 39
    • 0023664206 scopus 로고
    • Aggregation of DNA by analogs of spermidine: Enzymatic and structural studies
    • Srivenugopal, K. S., D. E. Wemmer, and D. R. Morris. 1987. Aggregation of DNA by analogs of spermidine: enzymatic and structural studies. Nucleic Acids Res. 15:2563-2580.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 2563-2580
    • Srivenugopal, K.S.1    Wemmer, D.E.2    Morris, D.R.3
  • 40
    • 0001026022 scopus 로고
    • Solid-state 31P NMR studies of DNA liquid crystalline phases. The isotropic to cholesteric transition
    • Strzelecka, T. E., and R. L. Rill. 1987. Solid-state 31P NMR studies of DNA liquid crystalline phases. The isotropic to cholesteric transition. J. Am. Chem. Soc. 109:4513-4518.
    • (1987) J. Am. Chem. Soc. , vol.109 , pp. 4513-4518
    • Strzelecka, T.E.1    Rill, R.L.2
  • 41
    • 0014674732 scopus 로고
    • An X-ray study of the interaction of DNA with spermine
    • Suwalsky, M., W. Traub, U. Shmueli, and J. A. Subirana. 1969. An X-ray study of the interaction of DNA with spermine. J. Mol. Biol. 42:363-373.
    • (1969) J. Mol. Biol. , vol.42 , pp. 363-373
    • Suwalsky, M.1    Traub, W.2    Shmueli, U.3    Subirana, J.A.4
  • 42
    • 10044266328 scopus 로고
    • The protective effect of spermine and other polyamines against heat denaturation of deoxyribonucleic acid
    • Tabor, H. 1962. The protective effect of spermine and other polyamines against heat denaturation of deoxyribonucleic acid. Biochemistry. 1:496-501.
    • (1962) Biochemistry , vol.1 , pp. 496-501
    • Tabor, H.1
  • 44
  • 45
    • 0035099627 scopus 로고    scopus 로고
    • Polyamines in cell growth and cell death: Molecular mechanisms and therapeutic applications
    • Thomas, T., and T. J. Thomas. 2001. Polyamines in cell growth and cell death: molecular mechanisms and therapeutic applications. Cell. Mol. Life Sci. 58:244-258.
    • (2001) Cell. Mol. Life Sci. , vol.58 , pp. 244-258
    • Thomas, T.1    Thomas, T.J.2
  • 46
    • 0141627565 scopus 로고    scopus 로고
    • Giant DNA molecules exhibit on/off switching of transcriptional transition
    • Tsumoto, K., F. Luckel, and K. Yoshikawa. 2003. Giant DNA molecules exhibit on/off switching of transcriptional transition. Biophys. Chem. 106: 23-29.
    • (2003) Biophys. Chem. , vol.106 , pp. 23-29
    • Tsumoto, K.1    Luckel, F.2    Yoshikawa, K.3
  • 47
    • 0037079669 scopus 로고    scopus 로고
    • Polyamine-nucleic interactions and the effects on structure in oriented DNA fibers
    • van Dam, L., N. Korolev, and L. Nordenskiöld. 2002. Polyamine-nucleic interactions and the effects on structure in oriented DNA fibers. Nucleic Acids Res. 30:419-428.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 419-428
    • Van Dam, L.1    Korolev, N.2    Nordenskiöld, L.3
  • 48
    • 0034652183 scopus 로고    scopus 로고
    • Changes in gene expression in response to polyamine depletion indicates selective stabilization of mRNAs
    • Veress, I., S. Haghighi, A. Pulkka, and A. Pajunen. 2000. Changes in gene expression in response to polyamine depletion indicates selective stabilization of mRNAs. Biochem. J. 346:185-191.
    • (2000) Biochem. J. , vol.346 , pp. 185-191
    • Veress, I.1    Haghighi, S.2    Pulkka, A.3    Pajunen, A.4
  • 49
    • 0025786779 scopus 로고
    • Estimation of polyamine binding to macromolecules and ATP in bovine lymphocytes and rat liver
    • Watanabe, S. I., K. Kusama-Eguchi, H. Kobayashi, and K. Igarashi. 1991. Estimation of polyamine binding to macromolecules and ATP in bovine lymphocytes and rat liver. J. Biol. Chem. 266:20803-20809.
    • (1991) J. Biol. Chem. , vol.266 , pp. 20803-20809
    • Watanabe, S.I.1    Kusama-Eguchi, K.2    Kobayashi, H.3    Igarashi, K.4


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