A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.)

Planta

Volumn 220, Issue 1, 2004, Pages 9-16

  Hirose, Tatsuro ^a   Terao, Tomio ^a  

^a FOOD RESEARCH INSTITUTE   (Japan)

Author keywords

Caryopsis; Gene family; Oryza; Starch synthase

Indexed keywords

DATABASE SYSTEMS; DNA; GENES; GRAIN (AGRICULTURAL PRODUCT); STARCH; TISSUE;

CARYOPSIS; GRANULE-BOUND STARCH SYNTHASE (GBSS); ISOGENES;

CROPS;

COMPLEMENTARY DNA; ISOENZYME; PRIMER DNA; STARCH SYNTHASE;

ARTICLE; CLASSIFICATION; ENZYMOLOGY; GENETICS; GENOME; MULTIGENE FAMILY; PHYLOGENY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RICE;

DNA PRIMERS; DNA, COMPLEMENTARY; GENOME, PLANT; ISOENZYMES; MULTIGENE FAMILY; ORYZA SATIVA; PHYLOGENY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; STARCH SYNTHASE;

DATA BASES; GENES; NUCLEIC ACIDS; RICE; STARCH;

ORYZA; ORYZA SATIVA;

EID: 11144331443     PISSN: 00320935     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00425-004-1314-6     Document Type: Article

References (25)

1. Cao H, Imparl-Radosevich J, Guan H, Keeling PL, James MG, Myers AM (1999) Identification of the soluble starch synthase activities of maize endosperm. Plant Physiol 120:205-215
2. Chang S, Puryear J, Cairney J (1993) A simplified method for isolating RNA from pine trees. Plant Mol Biol Rep 11:113-116
3. Craig J, Lloyd JR, Tomlinson K, Barber L, Edwards A, Wang TL, Martin C, Hedley CL, Smith AM (1998) Mutations in the gene encoding starch synthase II profoundly alter amylopectin structure in pea embryos. Plant Cell 10:413-426
4. Gao M, Fisher DK, Kim KN, Shannon JC, Guiltinan MJ (1997) Independent genetic control of maize starch-branching enzymes IIa and IIb. Plant Physiol 114:69-78
5. Gao M, Wanat J, Stinard PS, James MG, Myers AM (1998) Characterization of dull1, a maize gene coding for a novel starch synthase. Plant Cell 10:399-412
6. Gubler F, Li Z, Fieg S, Jacobsen JV, Morell MK (2000) Cloning and characterization of a starch synthase I gene (Accession No. AF234163) from barley (PGR00-047). Plant Physiol 122:1459
7. Harn C, Knight M, Ramakrishnan A, Guan H, Keeling PL, Wasserman BP (1998) Isolation and characterization of the zSSIIa and zSSIIb starch synthase cDNA clones from maize endosperm. Plant Mol Biol 37:639-649
8. Hirose T, Takano M, Terao T (2002) Cell wall invertase in developing rice caryopsis: molecular cloning of OsCIN1 and analysis of its expression in relation to its role in grain filling. Plant Cell Physiol 43:452-459
9. James MG, Denyer K, Myers AM (2003) Starch synthesis in the cereal endosperm. Curr Opin Plant Biol 6:215-22
10. Li Z, Sun F, Xu S, Chu X, Mukai Y, Yamamoto M, Ali S, Rampling L, Kosar-Hashemi, Rahman S, Morell MK (2003) The structural organisation of the gene encoding class II starch synthase of wheat and barley and the evolution of the genes encoding starch synthase in plants. Funct Integr Genomics 3:76-85
11. Matsuoka M (1990) Classification and characterization of cDNA that encodes the light-harvesting chlorophyll a/b binding protein of photosystem II from rice. Plant Cell Physiol 31:519-526
12. Mizuno K, Kobayashi E, Tachibana M, Kawasaki T, Fujiwara T, Funane K, Kobayashi M, Baba T (2001) Characterization of an isoform of rice starch branching enzyme, RBE4, in developing seeds. Plant Cell Physiol 42:349-357
13. Nakamura T, Vrinten P, Hayakawa K, Ikeda J (1998) Characterization of a granule-bound starch synthase isoform found in the pericarp of wheat. Plant Physiol 118:451-459
14. Nakamura Y (2002) Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: rice endosperm as a model tissue. Plant Cell Physiol 43:718-725
15. Patron N, Smith AM, Fahy BF, Hylton CM, Naldrett MJ, Rossnagel BC, Denyer K (2002) The altered pattern of amylose accumulation in the endosperm of low-amylose barley cultivars is attributable to a single mutant allele of granule-bound starch synthase I with a deletion in the 5′-non-coding region. Plant Physiol 130:190-198
16. Preiss J, Sivak MN (1996) Starch synthesis in sinks and sources. In: Zamski E, Schaffer AA (eds) Photoassimilate distribution in plants and crops. Dekker, New York, pp 63-96
17. Sato K (1984) Starch granules in tissues of rice plants and their changes in relation to plant growth. JARQ 18:78-86
18. Smith AM, Denyer K, Martin C (1997) The synthesis of the starch granule. Annu Rev Plant Physiol Plant Mol Biol 48:67-87
19. Takaiwa F, Oono K, Wing D, Kato A (1991) Sequence of three members and expression of a new major superfamily of glutelin genes from rice. Plant Mol Biol 17:875-885
20. Tomlinson KL, Lloyd JR, Smith AM (1997) Importance of isoforms of starch-branching enzyme in determining the structure of starch in pea leaves. Plant J 11:31-43
21. Tomlinson K, Craig J, Smith AM (1998) Major differences in isoform composition of starch synthase between leaves and embryos of pea (Pisum sativum L.). Planta 204:86-92
22. Umemoto T, Yano M, Satoh H, Shomura A, Nakamura Y (2002) Mapping of a gene responsible for the difference in amylopectin structure between japonica-type and indica-type rice varieties. Theor Appl Genet 104:1-8
23. Vrinten PL, Nakamura T (2000) Wheat granule-bound starch synthase I and II are encoded by separate genes that are expressed in different tissues. Plant Physiol 122:255-263
24. Wang YJ, White P, Pollak L, Jane JL (1993) Characterization of starch structures of 17 maize endosperm mutant genotypes with Oh43 inbred line background. Cereal Chem 70:171-179
25. Zhu T, Budworth P, Chen W, Provart N, Chang HS, Guimil S, Su W, Estes B, Zou G, Wang X (2003) Transcriptional control of nutrient partitioning during rice grain filling. Plant Biotechnol J 1:59-70