-
4
-
-
0034529061
-
A method for homogeneous color-compensated genotyping of factor V (G1691A) and methylenetetrahydrofolate reductase (C677T) mutations using real-time multiplex fluorescence PCR
-
N. von Ahsen, M. Oellerich, and E. Schütz A method for homogeneous color-compensated genotyping of factor V (G1691A) and methylenetetrahydrofolate reductase (C677T) mutations using real-time multiplex fluorescence PCR Clin. Biochem. 33 2000 535 539
-
(2000)
Clin. Biochem.
, vol.33
, pp. 535-539
-
-
Von Ahsen, N.1
Oellerich, M.2
Schütz, E.3
-
5
-
-
0032539693
-
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
-
J. SantaLucia Jr. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics Proc. Natl. Acad. Sci. USA 95 1998 1460 1465
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 1460-1465
-
-
SantaLucia Jr., J.1
-
6
-
-
0031432735
-
Predicting sequence-dependent melting stability of short duplex DNA oligomers
-
R. Owczarzy, P.M. Vallone, F.J. Gallo, T.M. Paner, M.J. Lane, and A.S. Benight Predicting sequence-dependent melting stability of short duplex DNA oligomers Biopolymers 44 1997 217 239
-
(1997)
Biopolymers
, vol.44
, pp. 217-239
-
-
Owczarzy, R.1
Vallone, P.M.2
Gallo, F.J.3
Paner, T.M.4
Lane, M.J.5
Benight, A.S.6
-
7
-
-
1642380887
-
Effects of sodium ions on DNA duplex oligomers: Improved predictions of melting temperatures
-
R. Owczarzy, Y. You, B.G. Moreira, J.A. Manthey, L. Huang, M.A. Behlke, and J.A. Walder Effects of sodium ions on DNA duplex oligomers: improved predictions of melting temperatures Biochemistry 43 2004 3537 3554
-
(2004)
Biochemistry
, vol.43
, pp. 3537-3554
-
-
Owczarzy, R.1
You, Y.2
Moreira, B.G.3
Manthey, J.A.4
Huang, L.5
Behlke, M.A.6
Walder, J.A.7
-
8
-
-
0344843281
-
-
PhD thesis, Wayne State University, Detroit, Michigan
-
N. Peyret, Prediction of nucleic acid hybridization: parameters and algorithms, PhD thesis, pp. 128, Wayne State University, Detroit, Michigan, 2000
-
(2000)
Prediction of Nucleic Acid Hybridization: Parameters and Algorithms
, pp. 128
-
-
Peyret, N.1
-
9
-
-
0033762202
-
Genotyping of eight thiopurine methyltransferase mutations: Three-color multiplexing, "two-color/shared" anchor, and fluorescence-quenching hybridization probe assays based on thermodynamic nearest-neighbor probe design
-
E. Schütz, N. von Ahsen, and M. Oellerich Genotyping of eight thiopurine methyltransferase mutations: three-color multiplexing, "two-color/shared" anchor, and fluorescence-quenching hybridization probe assays based on thermodynamic nearest-neighbor probe design Clin. Chem. 46 2000 1728 1737
-
(2000)
Clin. Chem.
, vol.46
, pp. 1728-1737
-
-
Schütz, E.1
Von Ahsen, N.2
Oellerich, M.3
-
10
-
-
0037441583
-
Optimizing primer-probe design for fluorescent PCR
-
D. Proudnikov, V. Yuferov, Y. Zhou, K.S. LaForge, A. Ho, and M.J. Kreek Optimizing primer-probe design for fluorescent PCR J. Neurosci. Methods 123 2003 31 45
-
(2003)
J. Neurosci. Methods
, vol.123
, pp. 31-45
-
-
Proudnikov, D.1
Yuferov, V.2
Zhou, Y.3
Laforge, K.S.4
Ho, A.5
Kreek, M.J.6
-
11
-
-
0035793647
-
Fluorescence resonance energy transfer as a probe for G-quartet formation by a telomeric repeat
-
J.L. Mergny, and J.C. Maurizot Fluorescence resonance energy transfer as a probe for G-quartet formation by a telomeric repeat Chembiochem 2 2001 124 132
-
(2001)
Chembiochem
, vol.2
, pp. 124-132
-
-
Mergny, J.L.1
Maurizot, J.C.2
-
12
-
-
0033514429
-
Fluorescence energy transfer as a probe for tetraplex formation: The i-motif
-
J.L. Mergny Fluorescence energy transfer as a probe for tetraplex formation: the i-motif Biochemistry 38 1999 1573 1581
-
(1999)
Biochemistry
, vol.38
, pp. 1573-1581
-
-
Mergny, J.L.1
-
13
-
-
0038149001
-
Oligonucleotides with strongly fluorescent groups π-conjugated to nucleobase: Synthesis, melting temperatures, and conformation
-
G.-S. Jiao, and K. Burgess Oligonucleotides with strongly fluorescent groups π-conjugated to nucleobase: synthesis, melting temperatures, and conformation Bioorg. Med. Chem. Lett. 13 2003 2785 2788
-
(2003)
Bioorg. Med. Chem. Lett.
, vol.13
, pp. 2785-2788
-
-
Jiao, G.-S.1
Burgess, K.2
-
14
-
-
0027130638
-
Fluorescent labeling of a DNA sequencing primer
-
J. Mineno, Y. Ishino, T. Ohminami, and I. Kato Fluorescent labeling of a DNA sequencing primer DNA Seq. 4 1993 135 141
-
(1993)
DNA Seq.
, vol.4
, pp. 135-141
-
-
Mineno, J.1
Ishino, Y.2
Ohminami, T.3
Kato, I.4
-
15
-
-
0027469785
-
Sensitive fluorescence-based thermodynamic and kinetic measurements of DNA hybridization in solution
-
L.E. Morrison, and L.M. Stols Sensitive fluorescence-based thermodynamic and kinetic measurements of DNA hybridization in solution Biochemistry 32 1993 3095 3104
-
(1993)
Biochemistry
, vol.32
, pp. 3095-3104
-
-
Morrison, L.E.1
Stols, L.M.2
-
16
-
-
0036835759
-
Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes
-
S.A.E. Marras, F.R. Kramer, and S. Tyagi Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes Nucleic Acids Res. 30 2002 e122
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Marras, S.A.E.1
Kramer, F.R.2
Tyagi, S.3
-
17
-
-
0037440736
-
Hybridization kinetics and thermodynamics of molecular beacons
-
A. Tsourkas, M.A. Behlke, S.D. Rose, and G. Bao Hybridization kinetics and thermodynamics of molecular beacons Nucleic Acids Res. 31 2003 1319 1330
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 1319-1330
-
-
Tsourkas, A.1
Behlke, M.A.2
Rose, S.D.3
Bao, G.4
-
18
-
-
0037134940
-
Intramolecular dimers: A new strategy to fluorescence quenching in dual-labeled oligonucleotide probes
-
M.K. Johansson, H. Fidder, D. Dick, and R.M. Cook Intramolecular dimers: a new strategy to fluorescence quenching in dual-labeled oligonucleotide probes J. Am. Chem. Soc. 124 2002 6950 6956
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 6950-6956
-
-
Johansson, M.K.1
Fidder, H.2
Dick, D.3
Cook, R.M.4
-
19
-
-
0035941216
-
The role of PTF1-P48 in pancreatic acinar gene expression
-
S.D. Rose, G.H. Swift, M.J. Peyton, R.E. Hammer, and R.J. MacDonald The role of PTF1-P48 in pancreatic acinar gene expression J. Biol. Chem. 276 2001 44018 44026
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 44018-44026
-
-
Rose, S.D.1
Swift, G.H.2
Peyton, M.J.3
Hammer, R.E.4
MacDonald, R.J.5
-
20
-
-
0020674698
-
Base-stacking and base-pairing contributions to helix stability: Thermodynamics of double-helix formation with CCGG, CCGGp CCGGAp, ACCGGp, CCGGUp, and ACCGGUp
-
M. Petersheim, and D.H. Turner Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp CCGGAp, ACCGGp, CCGGUp, and ACCGGUp Biochemistry 22 1983 256 263
-
(1983)
Biochemistry
, vol.22
, pp. 256-263
-
-
Petersheim, M.1
Turner, D.H.2
-
22
-
-
0024290403
-
Influence of dangling thymidine residues on the stability and structure of two DNA duplexes
-
M. Senior, R.A. Jones, and K.J. Breslauer Influence of dangling thymidine residues on the stability and structure of two DNA duplexes Biochemistry 27 1988 3879 3885
-
(1988)
Biochemistry
, vol.27
, pp. 3879-3885
-
-
Senior, M.1
Jones, R.A.2
Breslauer, K.J.3
-
23
-
-
0034654495
-
Factors contributing to aromatic stacking in water: Evaluation in the context of DNA
-
K.M. Guckian, B.A. Schweitzer, R.X.-F. Ren, C.J. Sheils, D.C. Tahmassebi, and E.T. Kool Factors contributing to aromatic stacking in water: evaluation in the context of DNA J. Am. Chem. Soc. 122 2000 2213 2222
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 2213-2222
-
-
Guckian, K.M.1
Schweitzer, B.A.2
Ren, R.X.-F.3
Sheils, C.J.4
Tahmassebi, D.C.5
Kool, E.T.6
-
24
-
-
0034194135
-
Thermodynamic parameters for DNA sequences with dangling ends
-
S. Bommarito, N. Peyret, and J. SantaLucia Jr. Thermodynamic parameters for DNA sequences with dangling ends Nucleic Acids Res. 28 2000 1929 1934
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1929-1934
-
-
Bommarito, S.1
Peyret, N.2
SantaLucia Jr., J.3
-
29
-
-
0040547384
-
Purification and properties of disodium salt of ethylenediaminetetraacetic acid as a primary standard
-
W.J. Blaedel, and H.T. Knight Purification and properties of disodium salt of ethylenediaminetetraacetic acid as a primary standard Anal. Chem. 26 1954 741 746
-
(1954)
Anal. Chem.
, vol.26
, pp. 741-746
-
-
Blaedel, W.J.1
Knight, H.T.2
-
31
-
-
0002459355
-
Thermal denaturation of DNA molecules: A comparison of theory with experiment
-
R.M. Wartell, and A.S. Benight Thermal denaturation of DNA molecules: a comparison of theory with experiment Phys. Rep. 126 1985 67 107
-
(1985)
Phys. Rep.
, vol.126
, pp. 67-107
-
-
Wartell, R.M.1
Benight, A.S.2
-
32
-
-
0017554874
-
Data smoothing using low-pass digital filters
-
J.F. Kaiser, and W.A. Reed Data smoothing using low-pass digital filters Rev. Sci. Instrum. 48 1977 1447 1457
-
(1977)
Rev. Sci. Instrum.
, vol.48
, pp. 1447-1457
-
-
Kaiser, J.F.1
Reed, W.A.2
-
33
-
-
0023406843
-
Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves
-
L.A. Marky, and K.J. Breslauer Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves Biopolymers 26 1987 1601 1620
-
(1987)
Biopolymers
, vol.26
, pp. 1601-1620
-
-
Marky, L.A.1
Breslauer, K.J.2
-
34
-
-
0037106338
-
Melting studies of dangling-ended DNA hairpins: Effects of end length, loop sequence and biotinylation of loop bases
-
P.V. Riccelli, K.E. Mandell, and A.S. Benight Melting studies of dangling-ended DNA hairpins: effects of end length, loop sequence and biotinylation of loop bases Nucleic Acids Res. 30 2002 4088 4093
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 4088-4093
-
-
Riccelli, P.V.1
Mandell, K.E.2
Benight, A.S.3
-
35
-
-
0037019539
-
Long RNA dangling end has large energetic contribution to duplex stability
-
T. Ohmichi, S. Nakano, D. Miyoshi, and N. Sugimoto Long RNA dangling end has large energetic contribution to duplex stability J. Am. Chem. Soc. 124 2002 10367 10372
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 10367-10372
-
-
Ohmichi, T.1
Nakano, S.2
Miyoshi, D.3
Sugimoto, N.4
-
36
-
-
0034978843
-
Interaction of cyanine dyes with nucleic acids. XXI. Arguments for half-intercalation model of interaction
-
S.M. Yarmoluk, S.S. Lukashov, T.YU. Ogul'chansky, M.Y.U. Losytskyy, and O.S. Kornyushyna Interaction of cyanine dyes with nucleic acids. XXI. Arguments for half-intercalation model of interaction Biopolymers 62 2001 219 227
-
(2001)
Biopolymers
, vol.62
, pp. 219-227
-
-
Yarmoluk, S.M.1
Lukashov, S.S.2
Ogul'Chansky, T.YU.3
Losytskyy, M.Y.U.4
Kornyushyna, O.S.5
-
37
-
-
0034650608
-
3′-Minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures
-
I.V. Kutyavin, I.A. Afonina, A. Mills, V.V. Gorn, E.A. Lukhtanov, E.S. Belousov, M.J. Singer, D.K. Walburger, S.G. Lokhov, A.A. Gall, R. Dempcy, M.W. Reed, R.B. Meyer, and J. Hedgpeth 3′-Minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures Nucleic Acids Res. 28 2000 655 661
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 655-661
-
-
Kutyavin, I.V.1
Afonina, I.A.2
Mills, A.3
Gorn, V.V.4
Lukhtanov, E.A.5
Belousov, E.S.6
Singer, M.J.7
Walburger, D.K.8
Lokhov, S.G.9
Gall, A.A.10
Dempcy, R.11
Reed, M.W.12
Meyer, R.B.13
Hedgpeth, J.14
-
38
-
-
0021667544
-
Physico-chemical probes of intercalation
-
G. Dougherty, and J.R. Pilbrow Physico-chemical probes of intercalation Int. J. Biochem. 16 1984 1179 1192
-
(1984)
Int. J. Biochem.
, vol.16
, pp. 1179-1192
-
-
Dougherty, G.1
Pilbrow, J.R.2
-
39
-
-
0023663444
-
Synthesis and characterization of oligodeoxyribonucleotides containing terminal phosphates
-
M. Bower, M.F. Summers, B. Kell, J. Hoskins, G. Zon, and W.D. Wilson Synthesis and characterization of oligodeoxyribonucleotides containing terminal phosphates Nucleic Acid Res. 15 1987 3531 3547
-
(1987)
Nucleic Acid Res.
, vol.15
, pp. 3531-3547
-
-
Bower, M.1
Summers, M.F.2
Kell, B.3
Hoskins, J.4
Zon, G.5
Wilson, W.D.6
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