DNA chip technology in cardiovascular research

Archives des Maladies du Coeur et des Vaisseaux

Volumn 97, Issue 12, 2004, Pages 1251-1255

  Lamirault, G ^a,b   Steenman, M ^a,c   Le Meur, N ^c   Demolombe, S ^a   Trochu, J N ^b   Leger J J ^a,c  

^a L INSTITUT DU THORAX   (France)

^b NANTES UNIVERSITY HOSPITAL   (France)

^c UNIVERSITÉ DE NANTES   (France)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

ALGORITHM; ARTICLE; CARDIOVASCULAR SYSTEM; DNA MICROARRAY; DNA SEQUENCE; GENE EXPRESSION; GENOME; HUMAN; MATHEMATICAL ANALYSIS; MEDICAL RESEARCH; TECHNOLOGY;

ANIMALS; CARDIOVASCULAR PHYSIOLOGY; GENE EXPRESSION PROFILING; HUMANS; MYOCARDIUM; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; TRANSCRIPTION, GENETIC;

EID: 11144285907     PISSN: 00039683     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (23)

1. Swynghedauw B. Physiologie cardiovasculaire: les nouvelles données. Arch Mal Cœur 2002; 95: 299-304.
2. The Chipping Forecast II. Nat Genet 2002; 32: 465-552.
3. Southern EM. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 1975; 98: 503-17.
4. Steenman M, Chen YW, Le Cunff M et al. Transcriptomal analysis of failing and nonfailing human hearts. Physiol Genomics 2003; 12: 97-112.
5. Rouger K, Le Cunff M, Steenman M et al. Global/temporal gene expression in diaphragm and hindlimb muscles of dystrophin-deficient (mdx) mice. Am J Physiol Cell Physiol 2002; 283: C773-84.
6. Steenman M, Lamirault G, Le Meur N, Le Cunff M, Escande D, Leger JJ. Distinct molecular portraits of human failing hearts identified by dedicated cDNA microarrays. Eur J Heart Fail 2004 (in press).
7. Philip-Couderc P, Smih F, Pelat M et al. Modifications précoces du transcriptome auriculaire dans l'hypertension artérielle associée à l'obésité chez le chien. Arch Mal Cœur 2002; 95: 695-9.
8. Hwang DM, Dempsey AA, Wang RX et al. A genome-based resource for molecular cardiovascular medicine: toward a compendium of cardiovascular genes. Circulation 1997; 96: 4146-203.
9. Anisimov SV, Tarasov KV, Stern MD, Lakatta EG, Boheler KR. A quantitative and validated SAGE transcriptome reference for adult mouse heart. Genomics 2002; 80: 213-22.
10. Auer H, Lyianarachchi S, Newsom D et al. Chipping away at the chip bias: RNA degradation in microarray analysis. Nat Genet 2003; 35: 292-3.
11. Wang J, Hu L, Hamilton SR, Coombes KR, Zhang W. RNA amplification strategies for cDNA microarray experiments. Biotechniques 2003; 34: 394-400.
12. Le Meur N, Lamirault G, Bihouée A et al. A dynamic, web-accessible resource to process raw microarray scan data into consolidated gene expression values. Importance of replication. Nucleic Acids Res 2004 (in press).
13. Storey JD, Tibshirani R. Statistical significance for genomewide studies. Proc Natl Acad Sci USA 2003; 100: 9440-5.
14. Quackenbush J. Computational analysis of microarray data. Nat Rev Genet 2001; 2: 418-27.
15. Chaussabel D, Semnani RT, McDowell MA, Sacks D, Sher A, Nutman TB. Unique gene expression profiles of human macrophages and dendritic cells to phylogenetically distinct parasites. Blood 2003; 102: 672-81.
16. Kaynak B, von Heydebreck A, Mebus S et al. Genome-wide array analysis of normal and malformed human hearts. Circulation 2003; 107: 2467-74.
17. Tabibiazar R, Wagner RA, Liao A, Quertermous T. Transcriptional profiling of the heart reveals chamber-specific gene expression patterns. Circ Res 2003; 93: 1193-201.
18. Kaab S, Barth AS, Margerie D et al. Global gene expression in human myocardium-oligonucleotide microarray analysis of regional diversity and transcriptional regulation in heart failure. J Mol Med 2004; 82: 308-16.
19. Le Bouter S, El Archi A, Marionneau C et al. Chronic amiodarone remodels expression of ion channel transcripts in the mouse heart. Circulation 2004 (in press).
20. Mirotsou M, Watanabe CM, Schultz PG, Pratt RE, Dzau VJ. Elucidating the molecular mechanism of cardiac remodeling using a comparative genomic approach. Physiol Genomics 2003; 15: 115-26
21. Chaudhry HW, Dashoush NH, Tang H et al. Cyclin A2 mediates cardiomyocyte mitosis in the postmitotic myocardium. J Biol Chem 2004; 279: 35858-66.
22. Renlund DG, Taylor DO, Kfoury AG, Shaddy RS. New UNOS rules: historical background and implications for transplantation management. United Network for Organ Sharing. J Heart Lung Transplant 1999; 18: 1065-70.
23. Petricoin EF, Hackett JL, Lesko U et al. Medical applications of microarray technologies: a regulatory science perspective. Nat Genet 2002; 32 (Suppl. 2): 474-9.