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Volumn 26 IV, Issue , 2004, Pages 2781-2784

Order independent structural alignment of circularly permuted proteins

Author keywords

Circular permuations; Integer programming; Linear programming; Protein structure alignment

Indexed keywords

CIRCULAR PERMUTATIONS; PRIMARY SEQUENCES; PROTEIN STRUCTURE ALIGNMENT; REVERSE ORDERING;

EID: 11144264170     PISSN: 05891019     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (6)

References (8)
  • 1
    • 0030979555 scopus 로고    scopus 로고
    • Circular permutations of natural protein sequences: Structural evidence
    • Y. Lindqvist and G. Schneider. Circular permutations of natural protein sequences: structural evidence. Curr. Opinion Struct. Biol., 7:422-427, 1997.
    • (1997) Curr. Opinion Struct. Biol. , vol.7 , pp. 422-427
    • Lindqvist, Y.1    Schneider, G.2
  • 2
    • 0032103855 scopus 로고    scopus 로고
    • Protein fold irregularities that hinder sequence analysis
    • R.B. Russell and C.P. Ponting. Protein fold irregularities that hinder sequence analysis. Curr. Opinion Struct. Biol., 8:364-371, 1998.
    • (1998) Curr. Opinion Struct. Biol. , vol.8 , pp. 364-371
    • Russell, R.B.1    Ponting, C.P.2
  • 3
    • 0033370743 scopus 로고    scopus 로고
    • A simple algorithm for detecting circular permutations in proteins
    • S. Uliel, A. Fliess, A. Amir, and R. Unger. A simple algorithm for detecting circular permutations in proteins. Bioinformatics, 15(11):930-936, 1999.
    • (1999) Bioinformatics , vol.15 , Issue.11 , pp. 930-936
    • Uliel, S.1    Fliess, A.2    Amir, A.3    Unger, R.4
  • 4
    • 0042890523 scopus 로고    scopus 로고
    • Inferring functional relationship of proteins from local sequence and spatial surface patterns
    • T.A. Binkowski, L. Adamian, and J. Liang. Inferring functional relationship of proteins from local sequence and spatial surface patterns. J. Mol. Biol., 332:505-526, 2003.
    • (2003) J. Mol. Biol. , vol.332 , pp. 505-526
    • Binkowski, T.A.1    Adamian, L.2    Liang, J.3
  • 5
    • 0034842485 scopus 로고    scopus 로고
    • Circularly permuted proteins in the protein structure database
    • J. Jung and B.K. Lee. Circularly permuted proteins in the protein structure database. Protein Science, 10:1881-1886, 2001.
    • (2001) Protein Science , vol.10 , pp. 1881-1886
    • Jung, J.1    Lee, B.K.2
  • 8
    • 0030080729 scopus 로고    scopus 로고
    • Fast Cholesky factorization for interior point methods of linear programming
    • C.S. Mészáros. Fast Cholesky factorization for interior point methods of linear programming. Comp. Math. Appl., 31:49-51, 1996.
    • (1996) Comp. Math. Appl. , vol.31 , pp. 49-51
    • Mészáros, C.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.