Genotyping of Streptococcus pneumoniae and Haemophilus influenzae isolated from paired middle ear fluid and nasopharynx by pulsed-field gel electrophoresis

ORL

Volumn 66, Issue 5, 2004, Pages 233-240

  Hotomi, Muneki ^a   Yamanaka, Noboru ^a   Billal, Dewan S ^a   Sakai, Akihiro ^a   Yamauchi, Kazuma ^a   Suzumoto, Masaki ^a   Takei, Shin ^a   Yasui, Noriyo ^a   Moriyama, Sotomi ^a   Kuki, Kinoyori ^a  

^a WAKAYAMA MEDICAL UNIVERSITY   (Japan)

Author keywords

Haemophilus influenzae; Pulsed field gel electrophoresis; Streptococcus pneumoniae

Indexed keywords

BETA LACTAMASE;

ARTICLE; AUDITORY TUBE; BACTERIAL COLONIZATION; BACTERIAL GENE; BACTERIAL MUTATION; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM ISOLATE; BACTERIUM ISOLATION; BODY FLUID; CELL MIGRATION; CLINICAL ARTICLE; CONTROLLED STUDY; GENE EXPRESSION; GENETIC SIMILARITY; GENOTYPE; HAEMOPHILUS INFLUENZAE; HUMAN; MIDDLE EAR; NASOPHARYNX; NONHUMAN; OTITIS MEDIA; POLYMERASE CHAIN REACTION; PREVALENCE; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; RESTRICTION FRAGMENT; STREPTOCOCCUS PNEUMONIAE;

BACTERIAL PROTEINS; CHILD; EAR, MIDDLE; ELECTROPHORESIS, GEL, PULSED-FIELD; GENOTYPE; HAEMOPHILUS INFLUENZAE; HUMANS; NASOPHARYNX; OTITIS MEDIA; POLYMERASE CHAIN REACTION; STREPTOCOCCUS PNEUMONIAE;

EID: 10844265290     PISSN: 03011569     EISSN: None     Source Type: Journal    
DOI: 10.1159/000081119     Document Type: Article

References (33)

1. Commisso R, Romero-Orellano F, Montanaro PB, Romero-Moroni F, Romero-Diaz R: Acute otitis media: Bacteriology and bacterial resistance in 205 pediatric patients. Int J Pediatr Otorhinolaryngol 2000;56:23-31.
2. Del Beccaro MA, Mendelman PM, Inglis AF, Richardson MA, Duncan NO, Clausen CR, Stull TL: Bacteriology of acute otitis media: A new perspective. J Pediatr 1992;120:81-84.
3. Block SL: Management of acute otitis media in the 1990s: The decade of resistant pneumococcus. Paediatr Drugs 1990;1:31-50.
4. Dowell SF, Butler JC, Giebink GS, Jacobs MR, Jernigan D, Musher DM, Rakowsky A, Schwartz B: Acute otitis media: Management and surveillance in an era of pneumococcal resistance - A report from the Drug-Resistant Streptococcus pneumoniae Therapeutic Working Group. Pediatr Infect Dis J 1999;18:1-9.
5. Teele DW: Acute otitis media: Antimicrobial therapy in an era of resistant bacteria and sceptical meta-analysticians. N Z Med J 2000;113:284-286.
6. Zenni MK, Cheatham SH, Thompson JM, Reed GW, Batson AB, Palmer PS, Holland KL, Edwards KM: Streptococcus pneumoniae colonization in the young child: Association with otitis media and resistance to penicillin. J Pediatr 1995;127:533-537.
7. Dhooge I, Van Damme D, Vaneechoutte M, Claeys G, Verschraegen G, Van Cauwenberge P: Role of nasopharyngeal bacterial flora in the evaluation of recurrent middle ear infections in children. Clin Microbiol Infect 1999;5:530-534.
8. Long SS, Henretig FM, Teter MJ, McGowan KL, Long S: Nasopharyngeal flora and acute otitis media. Infect Immun 1983;41:987-991.
9. Sanyal MA, Henderson FW, Stempel EC, Collier AM, Denny FW: Effect of upper respiratory tract infection on eustachian tube ventilatory function in the preschool child. J Pediatr 1980;97:11-15.
10. Faden H, Stanievich J, Brodsky L, Bernstein J, Ogra PL: Changes in nasopharyngeal flora during otitis media of childhood. Pediatr Infect Dis J 1990;9:623-626.
11. Faden H, Duffy L, Wasielewski R, Wolf J, Krystofik D, Tung Y: Relationship between nasopharyngeal colonization and the development of otitis media in children. J Infect Dis 1997;175:1440-1445.
12. Stenfors LE, Raisanen S: The bacterial flora of the nasopharynx, with special reference to middle ear pathogens. A quantitative study in twenty children. Acta Otolaryngol 1989;108:122-125.
13. Gehanno P, Lenoir G, Barry B, Bons J, Boucot I, Berche P: Evaluation of nasopharyngeal cultures for bacteriologic assessment of acute otitis media in children. Pediatr Infect Dis J 1996;15:329-332.
14. Gehanno P, Barry B, Berche P: Acute childhood otitis media: The diagnostic value of bacterial samples from the nasopharynx. Clin Microbiol Infect 1997;3 Suppl 3:S34-S36.
15. Schwartz R, Rodriguez WJ, Mann R, Khan W, Ross S: The nasopharyngeal culture in acute otitis media. A reappraisal of its usefulness. JAMA 1979;241:2170-2173.
16. Shimada J, Yamanaka N, Hotomi M, Suzumoto M, Sakai A, Ubukata K, Mitsuda T, Yokota S, Faden H: Household transmission of Streptoccus pneumoniae among siblings with acute otitis media. J Clin Microbiol 2002;40:1851-1853.
17. Hasegawa K, Yamamoto K, Chiba N, Kobayashi R, Nagai K, Jacobs MR, Appelbaum PC, Sunakawa K, Ubukata K: Diversity of ampicillin-resistance genes in Haemophilus influenzae in Japan and the United States. Microb Drug Resist 2003;9:39-46.
18. Ubukata K, Shibasaki Y, Yamamoto K, Chiba N, Hasegawa K, Takeuchi Y, Sunakawa K, Inoue M, Konno M: Association of amino acid substitutions in penicillin-binding protein 3 with beta-lactam resistance in beta- lactamasenegative ampicillin-resistant Haemophilus influenzae. Antimicrob Agents Chemother 2001;45:1693-1699.
19. Ubukata K, Asahi Y, Yamane A, Konno M: Combinational detection of autolysin and penicillin-binding protein 2B genes of Streptococcus pneumoniae by PCR. J Clin Microbiol 1996;34:592-596.
20. Krasan GP, Cutter D, Block SL, St Geme JW 3rd: Adhesin expression in matched nasopharyngeal and middle ear isolates of nontypeable Haemophilus influenzae from children with acute otitis media. Infect Immun 1999;67:449-454.
21. Barenkamp SJ, Munson RS Jr, Granoff DM: Outer membrane protein and biotype analysis of pathogenic nontypable Haemophilus influenzae. Infect Immun 1982;36:535-540.
22. Brygge K, Sorensen CH, Colding H, Ejlertsen T, Hojbjerg T, Bruun B: Ribotyping of strains of Moraxella (Branhamella) catarrhalis cultured from the nasopharynx and middle ear of children with otitis media. Acta Otolaryngol 1998;118:381-385.
23. DeMaria TF, Lim DJ, Barnishan J, Ayers LW, Birck HG: Biotypes of serologically nontypeable Haemophilus influenzae isolated from the middle ears and nasopharynges of patients with otitis media with effusion. J Clin Microbiol 1999;20:1102-1104.
24. Murphy TF, Bernstein JM, Dryja DM, Campagnari AA, Apicella MA: Outer membrane protein and lipoologosaccharide analysis of paired nasopharyngeal and middle ear isolates in otitis media due to nontypable Haemophilus influenzae: Pathogenic and epidemiological observations. J Infect Dis 1987;156:723-731.
25. Villasenor-Sierra A, Santos JJ: Outer membrane protein profiles of paired nasopharyngeal and middle ear isolates of nontypable Haemophilus influenzae from Mexican children with acute otitis media. Clin Infect Dis 1999;28:267-273.
26. Murphy TF, Dudas KC, Mylotte JM, Apicella MA: A subtyping system for nontypable Haemophilus influenzae based on outer-membrane proteins. J Infect Dis 1983;147:838-846.
27. van Belkum A, Duim B, Regelink A, Moller L, Quint W, van Alphen L: Genomic DNA fingerprinting of clinical Haemophilus influenzae isolates by polymerase chain reaction amplification: Comparison with major outer-membrane protein and restriction fragment length polymorphism analysis. J Med Microbiol 1994;41:63-68.
28. Jordens JZ, Leaves NI, Anderson EC, Slack MP: Polymerase chain reaction-based strain characterization of noncapsulate Haemophilus influenzae. J Clin Microbiol 1993;31:2981-2987.
29. Saito M, Umeda A, Yoshida S: Subtyping of Haemophilus influenzae strains by pulsed-field gel electrophoresis. J Clin Microbiol 1999;37:2142-2147.
30. Loos BG, Bernstein JM, Dryja DM, Murphy TF, Dickinson DP: Determination of the epidemiology and transmission of nontypeable Haemophilus influenzae in children with otitis media by comparison of total genomic DNA restriction fingerprint. Infect Immun 1989;156:2751-2757.
31. Bernstain JM, Dryja DM, Loose BG, Dickinson DP: Restriction fragment mapping of nontypable Haemophilus influenzae: A new tool to study this middle ear pathogen. Otolaryngol Head Neck Surg 1989;100:200-206.
32. Trottier S, Stenberg K, Svanborg-Eden C: Turnover of nontypable Haemophilus influenzae in the nasopharynges of healthy children. J Clin Microbiol 1989;27:2175-2179.
33. Bernstein JM, Dryja DM, Yuskiw N, Murphy TF: Analysis of isolates recovered from multiple sites of the nasopharynx of children colonized by nontypeable Haemophilus influenzae. Eur J Clin Microbiol Infect Dis 1997;16:750-753.