Duplex polymerase chain reaction with confronting two-pair primers (PCR-CTPP) for genotyping alcohol dehydrogenase β subunit (ADH2) and aldehyde dehydrogenase 2 (ALDH2)

Alcohol and Alcoholism

Volumn 38, Issue 5, 2003, Pages 407-410

  Tamakoshi, Akiko ^a   Hamajima, Nobuyuki ^a   Kawase, Haruya ^a   Wakai, Kenji ^a   Katsuda, Nobuyuki ^b   Saito, Toshiko ^c   Ito, Hidemi ^c   Hirose, Kaoru ^c   Takezaki, Toshiro ^c   Tajima, Kazuo ^c  

^a NAGOYA UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^b Nagoya Kita Health Center   (Japan)

^c AICHI CANCER CENTER HOSPITAL   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL DEHYDROGENASE; ALDEHYDE DEHYDROGENASE ISOENZYME 2; ARGININE; GLUTAMINE; HISTIDINE; LYSINE; PRIMER DNA;

ADULT; AGED; ALCOHOLISM; ALLELE; ARTICLE; BETA CHAIN; CONTROLLED STUDY; ENZYME SUBUNIT; FEMALE; GEL ELECTROPHORESIS; GENE AMPLIFICATION; GENETIC POLYMORPHISM; GENETIC RISK; GENOTYPE; HUMAN; HUMAN EXPERIMENT; INTERMETHOD COMPARISON; MALE; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RISK ASSESSMENT;

ADULT; AGED; AGED, 80 AND OVER; ALCOHOL DEHYDROGENASE; ALDEHYDE DEHYDROGENASE; CHI-SQUARE DISTRIBUTION; DNA PRIMERS; FEMALE; GENOTYPE; HUMANS; MALE; MIDDLE AGED; NUCLEIC ACID HETERODUPLEXES; POLYMERASE CHAIN REACTION;

EID: 10744231643     PISSN: 07350414     EISSN: None     Source Type: Journal    
DOI: 10.1093/alcalc/agg096     Document Type: Article

References (19)

1. Chao, Y. C., Wang, L. S., Hsieh, T. Y., Chu, C. W., Chang, F. Y. and Chu, H. C. (2000) Chinese alcoholic patients with esophageal cancer are genetically different from alcoholics with acute pancreatitis and liver cirrhosis. American Journal of Gastroenterology 95, 2958-2964.
2. Chen, C. C., Lu, R. B., Chen, Y. C., Wang, M. F., Chang, Y. C., Li, T. K. and Yin, S. J. (1999) Interaction between the functional polymorphisms of the alcohol-metabolism genes in protection against alcoholism. American Journal of Human Genetics 65, 795-807.
3. Goedde, H. W., Agarwal, D. P., Fritze, G., Meier-Tackmann, D., Singh, S., Beckmann, G., Bhatia, K., Chen, L. Z., Fang, B. and Lisker, R. (1992) Distribution of ADH2 and ALDH2 genotype in different populations. Human Genetics 88, 344-346.
4. Hamajima, N. (2001) PCR-CTPP: a new genotyping technique in the era of genetic epidemiology. Experimental Reviews in Molecular Diagnosis 1, 119-123.
5. Hamajima, N., Saito, T., Matsuo, K., Kozaki, K., Takahashi, T. and Tajima, K. (2000) Polymerase chain reaction with confronting two-pair primers for polymorphism genotyping. Japanese Journal of Cancer Research 91, 865-868.
6. Hamajima, N., Takezaki, T. and Tajima, K. (2002a) Allele frequencies of 25 polymorphisms pertaining to cancer risk for Japanese, Koreans and Chinese. Asian Pacific Journal of Cancer Prevention 3, 197-206.
7. Hamajima, N., Saito, T., Matsuo, K. and Tajima, K. (2002b) Competitive amplification and unspecific amplification in polymerase chain reaction with confronting two-pair primers (PCR-CTPP). Journal of Molecular Diagnosis 4, 103-107.
8. Hamajima, N., Saito, T., Matsuo, K., Suzuki, T., Nakamura, T., Matsuura, A., Okuma, K. and Tajima, K. (2002c) Genotype frequencies of 50 polymorphisms for 241 Japanese non-cancer patients. Journal of Epidemiology 12, 229-236.
9. Higuchi, S., Matsushita, S., Murayama, M, Takagi, S. and Hayashida, M. (1995) Alcohol and aldehyde dehydrogenase polymorphisms and the risk for alcoholism. American Journal of Psychiatry 152, 1219-1221.
10. Matsuo, K., Hamajima, N., Shinoda, M., Hatooka, S., Inoue, M., Takezaki, T. and Tajima, K. (2001) Gene-environment interaction between an aldehyde dehydrogenase-2 (ALDH2) polymorphism and alcohol consumption for the risk of esophageal cancer. Carcinogenesis 22, 913-916.
11. Matsuo, Y., Yokoyama, R. and Yokoyama, S. (1989) The genes for human alcohol dehydrogenases β1 and β2 differ by only one nucleotide. European Journal of Biochemistry 183, 317-320.
12. Muramatsu, T., Wang, Z. C., Fang, Y. R., Hu, K. B., Yan, H., Yamada, K., Higuchi, S., Harada, S. and Kono, H. (1995) Alcohol and aldehyde dehydrogenase genotypes and drinking behavior of Chinese living in Shanghai. Human Genetics 96, 151-154.
13. m aldehyde dehydrogenase in a Japanese population. Human Genetics 94, 217-223.
14. Takeshita, T., Mao, X. Q. and Morimoto, K. (1996) The contribution of polymorphism in the alcohol dehydrogenase β-subunit to alcohol sensitivity in a Japanese population. Human Genetics 97, 409-413.
15. Wall, T. L., Carr, L. G. and Ehlers, C. L. (2003) Protective association of genetic variation in alcohol dehydrogenase with alcohol dependence in Native American Mission Indians. American Journal of Psychiatry 160, 1-2.
16. Wan, Y. J., Poland, R. E. and Lin, K. M. (1998) Genetic polymorphism of CYP2E1, ADH2, and ALDH2 in Mexican-Americans. Genetics Testing 2, 79-83.
17. Yin, S. J., Bosron, W. F., Magnes, L. J. and Li, T. K. (1984) Human liver alcohol dehydrogenase: purification and kinetic characterization of the β2β2, β2β1, αβ2, and β2γ1 'Oriental' isoenzymes. Biochemistry 23, 5847-5853.
18. Yokoyama, A., Muramatsu, T., Ohmori, T, Yokoyama, T., Okuyama, K., Takahashi, H., Hasegawa, Y., Higuchi, S., Murayama, K., Shirakura, K. and Ishii, H. (1998) Alcohol-related cancers and aldehyde dehydrogenase-2 in Japanese alcoholics. Carcinogenesis 19, 1383-1387.
19. Yokoyama, A., Kato, H., Yokoyama, T., Tsujinaka, T., Muto, M., Omori, T., Haneda, T., Kumagai, Y., Igaki, H., Yokoyama, M., Watanabe, H., Fukuda, H. and Yoshimizu, H. (2002) Genetic polymorphisms of alcohol and aldehyde dehydrogenases and glutathione S-transferase M1 and drinking, smoking, and diet in Japanese men with esophageal squamous cell carcinoma. Carcinogenesis 23, 1851-1859.