Gene expression analysis in the hippocampal formation of tree shrews chronically treated with cortisol

Journal of Neuroscience Research

Volumn 78, Issue 5, 2004, Pages 702-710

  Alfonso, Julieta ^a   Agüero, Fernán ^a   Sanchez, Daniel O ^a   Flugge, Gabriele ^b   Fuchs, Eberhard ^b   Frasch, Alberto C C ^a   Pollevick, Guido D ^a,c  

^a INSTITUTO DE INVESTIGACIONES BIOTECNOLÓGICAS   (Argentina)

^b GERMAN PRIMATE CENTER   (Germany)

^c MASONIC MEDICAL RESEARCH LABORATORY   (United States)

Author keywords

Exon discovery; Expressed sequence tag; Glucocorticoids; mRNA; Subtractive library

Indexed keywords

HYDROCORTISONE;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CONCENTRATION RESPONSE; CONTROLLED STUDY; DATA BASE; DRUG EFFECT; EXON; EXPRESSED SEQUENCE TAG; GENE EXPRESSION REGULATION; HIPPOCAMPUS; HORMONE ACTION; INSECTIVORE; MALE; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; SPECIES DIFFERENCE; TRANSCRIPTION REGULATION;

ANIMALS; CLONING, MOLECULAR; DRUG ADMINISTRATION SCHEDULE; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE LIBRARY; HIPPOCAMPUS; HUMANS; HYDROCORTISONE; IN SITU HYBRIDIZATION; MALE; RATS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; TUPAIIDAE;

EID: 10644290846     PISSN: 03604012     EISSN: None     Source Type: Journal    
DOI: 10.1002/jnr.20328     Document Type: Article

References (28)

1. Agüero F, Verdún RE, Frasch AC, Sánchez DO. 2000. A random sequencing approach for the analysis of the Trypanosoma cruzi genome: general structure, large gene and repetitive DNA families, and gene discovery. Genome Res 10:1996-2005.
2. Alfonso J, Pollevick GD, Castensson A, Jazin E, Frasch AC. 2002. Analysis of gene expression in the rat hippocampus using real-time PCR reveals high inter-individual variation in mRNA expression levels. J Neurosci Res 67:225-234.
3. Alfonso J, Pollevick GD, Van Der Hart MG, Flugge G, Fuchs E, Frasch AC. 2004. Identification of genes regulated by chronic psychosocial stress and antidepressant treatment in the hippocampus. EurJ Neurosci 19:659-666.
4. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402.
5. Arriza JL, Simerly RB, Swanson LW, Evans RM. 1988. The neuronal mineralocorticoid receptor as a mediator of glucocorticoid response. Neuron 1:887-900.
6. Beaman-Hall CM, Wainer BH, Eves E, Bohn MC. 1996. Expression of glucocorticoid and mineralocorticoid receptors in an immortalized hippocampal neuronal cell line. Brain Res 726:141-152.
7. Boeckmann B, Bairoch A, Apweiler R, Blatter M-C, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M. 2003. The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res 31:365-370.
8. Chen J, Sun M, Lee S, Zhou G, Rowley JD, Wang SM. 2002. Identifying novel transcripts and novel genes in the human genome by using novel SAGE tags. Proc Natl Acad Sci U S A 99:12257-12262.
9. Datson NA, van der Perk J, de Kloet ER, Vreugdenhil E. 2001. Identification of corticosteroid-responsive genes in rat hippocampus using serial analysis of gene expression. Eur J Neurosci 14:675-689.
10. Fuchs E. 1999. Tree shrew. In: UFAW handbook on the care and management of laboratory animals. Oxford: Blackwell. p 235-245.
11. Fuchs E, Flugge G. 2002. Social stress in tree shrews: effects on physiology, brain function, and behavior of subordinate individuals. Pharmacol Biochem Behav 73:247-258.
12. Galante PA, Sakabe NJ, Kirschbaum-Slager N, de Souza SJ. 2004. Detection and evaluation of intron retention events in the human transcriptome. RNA 10:757-765.
13. Gould E, Woolley CS, McEwen BS. 1990. Short-term glucocorticoid manipulations affect neuronal morphology and survival in the adult dentate gyrus. Neuroscience 37:367-375.
14. Hauser MA, Li Y-J, Takeuchi S, Waiters R, Noureddine M, Maready M, Darden T, Hulette C, Martin E, Hauser E, Xu H, Schmechel D, Stenger JE, Dietrich F, Vance J. 2003. Genomic convergence: identifying candidate genes for Parkinson's disease by combining serial analysis of gene expression and genetic linkage. Hum Mol Genet 12:671-676.
15. Joels M, de Kloet ER. 1992. Control of neuronal excitability by corticosteroid hormones. Trends Neurosci 15:25-30.
16. Kent WJ. 2002. BLAT-the BLAST-like alignment tool. Genome Res 12:656-664.
17. Lopez JF, Akil H, Watson SJ. 1999. Neural circuits mediating stress. Biol Psychiatry 46:1461-1471.
18. Mironov AA, Fickett JW, Gelfand MS. 1999. Frequent alternative splicing of human genes. Genome Res 9:1288-1293.
19. Modrek B, Lee CJ. 2003. Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss. Nat Genet 34:177-180.
20. Modrek B, Resch A, Grasso C, Lee C. 2001. Genome-wide detection of alternative splicing in expressed sequences of human genes. Nucleic Acids Res 29:2850-2859.
21. Pavlides C, Watanabe Y, Magarinos AM, McEwen BS. 1995. Opposing roles of type I and type II adrenal steroid receptors in hippocampal long-term potentiation. Neuroscience 68:387-394.
22. Ririe KM, Rasmussen RP, Wittwer CT. 1997. Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Anal Biochem 245:154-160.
23. Rodriguez JJ, Montaron MF, Petry KG, Aurousseau C, Marinelli M, Premier S, Rougon G, Le Moal M, Abrous DN. 1998. Complex regulation of the expression of the polysialylated form of the neuronal cell adhesion molecule by glucocorticoids in the rat hippocampus. Eur J Neurosci 10:2994-3006.
24. Sambrook J, Maniatis T. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
25. Smith MA, Makino S, Kvetnansky R, Post RM. 1995. Stress and glucocorticoids affect the expression of brain-derived neurotrophic factor and neurotrophin-3 mRNAs in the hippocampus. J Neurosci 15:1768-1777.
26. Sugnet CW, Kent WJ, Ares M Jr, Haussler D. 2004. Transcriptome and genome conservation of alternative splicing events in humans and mice. Pac Symp Biocomput 9:66-77.
27. Vreugdenhil E, de Kloet ER, Schaaf M, Datson NA. 2001. Genetic dissection of corticosterone receptor function in the rat hippocampus. Eur Neuropsychopharmacol 11:423-430.
28. Wittwer CT, Herrmann MG, Moss AA, Rasmussen RP. 1997. Continuous fluorescence monitoring of rapid cycle DNA amplification. Biotechniques 22:130-131, 134-138.