HLA class II haplotypes in Mexican systemic lupus erythematosus patients

Human Immunology

Volumn 65, Issue 12, 2004, Pages 1469-1476

  Cortes, Lizette M ^a,c,h   Baltazar, Luz M ^d   Lopez Cardona, Maria G ^a   Olivares, Norma ^a   Ramos, Cesar ^b   Salazar, Mario ^b   Sandoval, Lucila ^a   Lorenz, Matthias G O ^g   Chakraborty, Ranajit ^e   Paterson, Andrew D ^f   Rivas, Fernando ^a  

^a Guadalajara Mexico   (Mexico)

^b HOSPITAL DE ESPECIALIDADES   (Mexico)

^c UNIVERSITY OF GUADALAJARA   (Mexico)

^d UNIVERSIDAD DE COLIMA   (Mexico)

^e UNIVERSITY OF CINCINNATI COLLEGE OF MEDICINE   (United States)

^f HOSPITAL FOR SICK CHILDREN   (Canada)

^g Laboratory of Genomics   (China)

^h NATIONAL EYE INSTITUTE   (United States)

Author keywords

association study; Haplotype; HLA class II; systemic lupus erythematosus

Indexed keywords

HLA ANTIGEN CLASS 2; HLA DQA1 ANTIGEN; HLA DQB1 ANTIGEN; HLA DR ANTIGEN;

ADOLESCENT; ADULT; AGED; ARTICLE; CONTROLLED STUDY; ETHNIC GROUP; FEMALE; GENE FREQUENCY; GENE LOCUS; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HUMAN; MAJOR CLINICAL STUDY; MALE; MEXICO; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SYSTEMIC LUPUS ERYTHEMATOSUS;

ADOLESCENT; ADULT; AGED; ALLELES; CASE-CONTROL STUDIES; FEMALE; GENE FREQUENCY; GENES, MHC CLASS II; GENOTYPE; HAPLOTYPES; HLA-D ANTIGENS; HLA-DQ ANTIGENS; HLA-DR ANTIGENS; HUMANS; LUPUS ERYTHEMATOSUS, SYSTEMIC; MALE; MEXICO; MIDDLE AGED;

EID: 10444268050     PISSN: 01988859     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.humimm.2004.09.008     Document Type: Article

References (42)

1. C. Putterman New approaches to the renal pathogenicity of anti-DNA antibodies in systemic lupus erythematosus Autoimmun Rev 3 2004 7
2. F.C. Grumet, A. Coukell, J.G. Bodmer, W.F. Bodmer, H.O. McDevitt Histocompatibility (HL-A) antigens associated with systemic lupus erythematosus a possible genetic predisposition to disease N Engl J Med 285 1971 193
3. J.D. Reveille, J.M. Moulds, C. Ahn, A.W. Friedman, B. Baethge, J. Roseman, K.V. Straaton, G.S. Alarcon Systemic lupus erythematosus in three ethnic groups. I. The effects of HLA class II, C4, and CR1 alleles, socioeconomic factors, and ethnicity at disease onset Arthritis Rheum 41 1998 1161
4. J. Calvo-Alen, J.D. Reveille, V. Rodriguez-Valverde, G. McGwin Jr, B.A. Baethge, A.W. Friedman, G.S. Alarcon Clinical, immunogenetic and outcome features of Hispanic systemic lupus erythematosus patients of different ethnic ancestry Lupus 12 2003 377
5. R.R. Graham, W.A. Ortmann, C.D. Langefeld, D. Jawaheer, S.A. Selby, P.R. Rodine, E.C. Baechler, K.E. Rohlf, K.B. Shark, K.J. Espe, L.E. Green, R.P. Nair, P. Stuart, J.T. Elder, R.A. King, K.L. Moser, P.M. Gaffney, T.L. Bugawan, H.A. Erlich, S.S. Rich, P.K. Gregersen, T.W. Behrens Visualizing human leukocyte antigen class II risk haplotypes in human systemic lupus erythematosus Am J Hum Genet 71 2002 543
6. M.C. Hochberg Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus Arthritis Rheum 40 1997 1725
7. S.A. Miller, D.D. Dykes, H.F. Polesky A simple salting out procedure for extracting DNA from human nucleated cells Nucleic Acids Res 16 1988 1215
8. S. Gustincich, G. Manfioletti, G. De Sal, C. Schneider, P. Carninci A fast method for high-quality genomic DNA extraction from whole human blood Biotechniques 11 1991 298
9. O. Olerup, H. Zetterquist HLA-DR typing by PCR amplification with sequence-specific primers (PCR-SSP) in 2 hours an alternative to serological DR typing in clinical practice including donor-recipient matching in cadaveric transplantation Tissue Antigens 39 1992 225
10. O. Olerup, A. Aldener, A. Fogdell HLA-DQB1 and -DQA1 typing by PCR amplification with sequence-specific primers (PCR-SSP) in 2 hours Tissue Antigens 41 1993 119
11. H. Inoko, M. Ota PCR-RFLP K.M. Hui J.L. Bidwell Handbook of HLA Typing Techniques 1993 CRC Press Boca Raton, FL
12. C.C. Li First Course in Population Genetics 1976 Boxwood Press Pacific Grove, CA
13. B.S. Weir Genetic Data Analysis 1990 Sinauer Associates Inc. Publ Sundland, MA
14. S.W. Guo, E.A. Thompson Performing the exact test of Hardy-Weinberg proportion for multiple alleles Biometrics 48 1992 361
15. L. Kruglyak, M.J. Daly, M.P. Reeve-Daly, E.S. Lander Parametric and nonparametric linkage analysis a unified multipoint approach Am J Hum Genet 58 1996 1347
16. R.S. Spielman, R.E. McGinnis, W.J. Ewens Transmission test for linkage disequilibrium the insulin gene region and insulin-dependent diabetes mellitus (IDDM) Am J Hum Genet 52 1993 506
17. 2 and the problem of small samples Mol Biol Evol 6 1989 539
18. D.J. Schaid Transmission disequilibrium, family controls and great expectations Am J Hum Genet 63 1998 935
19. J.B.S. Haldane The estimation and significance of the logarithm of a ratio of frequencies Ann Hum Genet 20 1955 309
20. J.M. Robins, S. Greenland Estimability and estimation of excess and etiologic fractions Stat Med 8 1989 845
21. S. Greenland, J.M. Robins Conceptual problems in the definition and interpretation of attributable fractions Am J Epidemiol 128 1988 1186
22. S. Skarsvag, E. Hansen, A. Holst, T. Moen Distribution of HLA class II alleles among Scandinavian patients with systemic lupus erythematosus (SLE) an increased risk of SLE among non [DRB1* (*)03, DQA1* (*)0501, DQB1* (*)0201] class II homozygotes? Tissue Antigens 40 1992 128
23. J.M. Martin-Villa, J. Martinez-Laso, M.A. Moreno-Pelayo, M.J. Castro-Panete, N. Martinez-Quiles, M. Alvarez, M.D. de Juan, J.J. Gomez-Reino, A. Arnaiz-Villena Differential contribution of HLA-DR, DQ, and TAP2 alleles to systemic lupus erythematosus susceptibility in Spanish patients role of TAP2* (*)01 alleles in Ro autoantibody production Ann Rheum Dis 57 1998 214
24. G. Vargas-Alarcon, N. Salgado, J. Granados, E. Gomez-Casado, J. Martinez-Laso, J. Alcocer-Varela, A. Arnaiz-Villena, D. Alarcon-Segovia Class II allele and haplotype frequencies in Mexican systemic lupus erythematosus patients the relevance of considering homologous chromosomes in determining susceptibility Hum Immunol 62 2001 814
25. Z. Yao, A. Kimura, K. Hartung, P.J. Haas, A. Volgger, G. Brunnler, J. Bonishc, E.D. Albert Polymorphism of the DQA1 promoter region (QAP) and DRB1, QAP, DQA1, DQB1 haplotypes in systemic lupus erythematosus. SLE Study Group members Immunogenetics 38 1993 421
26. G.F. Fischer, W.F. Pickl, I. Fae, B. Anegg, S. Milota, B. Volc-Platzer Association between chronic cutaneous lupus erythematosus and HLA class II alleles Hum Immunol 41 1994 280
27. D. Logar, B. Vidan-Jeras, V. Dolzan, B. Bozic, T. Kveder The contribution of HLA-DQB1 coding and QBP promoter alleles to anti-Ro alone autoantibody response in systemic lupus erythematosus Rheumatology (Oxford) 41 2002 305
28. A.R. Cabral, D. Alarcon-Segovia Autoantibodies in systemic lupus erythematosus Curr Opin Rheumatol 9 1997 387
29. F.C. Arnett, J.D. Reveille, H.M. Moutsopoulos, L. Georgescu, K.B. Elkon Ribosomal P autoantibodies in systemic lupus erythematosus frequencies in different ethnic groups and clinical and immunogenetic associations Arthritis Rheum 39 1996 1833
30. J. Granados, G. Vargas-Alarcon, C. Drenkard, F. Andrade, H. Melin-Aldana, J. Alcocer-Varela, D. Alarcon-Segovia Relationship of anticardiolipin antibodies and antiphospholipid syndrome to HLA-DR7 in Mexican patients with systemic lupus erythematosus (SLE) Lupus 6 1997 57
31. R.S. Abraham, Y.C. Kudva, S.B. Wilson, J.L. Strominger, C.S. David Co-expression of HLA DR3 and DQ8 results in the development of spontaneous insulitis and loss of tolerance to GAD65 in transgenic mice Diabetes 49 2000 548
32. L.M. Cortes, L.M. Baltazar, F.J. Perea, M.P. Gallegos-Arreola, S.E. Flores, L. Sandoval, N. Olivares, M.G.O. Lorenz, H. Xu, S.A. Barton, R. Chakraborty, F. Rivas HLA-DQB1, -DQA1, -DRB1 linkage disequilibrium and haplotype diversity in a Mestizo population from Guadalajara, Mexico Tissue Antigens 63 2004 458
33. G. Arnaiz-Villena, J. Vargas-Alarcón, E. Granados, J. Gómez-Casado, M. Longas, J. Gonzalez-Hevilla, N. Zuñiga, G. Salgado, J. Hernández-Pacheco, J. Guillen, Martinez-Laso HLA genes in Mexican Mazatecans, the peopling of the Americas and the uniqueness of Amerindians Tissue Antigens 56 2000 405
34. A. Spurkland, S. Saarinen, K.M. Boberg, S. Mitchell, U. Broome, L. Caballeria, E. Ciusani, R. Chapman, G. Ercilla, O. Fausa, I. Knutsen, A. Pares, F. Rosina, O. Olerup, E. Thorsby, E. Schrumpf HLA class II haplotypes in primary sclerosing cholangitis patients from five European populations Tissue Antigens 53 1999 459
35. D. Planelles, N. Puig, A. Beneto, E. Gomez, P. Rubio, V. Mirabet, S. Bonanad, I. Blasco, J.A. Montoro HLA-DQA, -DQB and -DRB allele contribution to narcolepsy susceptibility Eur J Immunogenet 24 1997 409
36. P. Westman, S. Hashemi-Tavoularis, V. Blanchette, S. Kekomaki, M. Laes, L. Porcelijn, R. Kekomaki Maternal DRB1* (*)1501, DQA1* (*)0102, DQB1* (*)0602 haplotype in fetomaternal alloimmunization against human platelet alloantigen HPA-6b (GPIIIa-Gln489) Tissue Antigens 50 1997 113
37. O. Fernandez, V. Fernandez, A. Alonso, A. Caballero, G. Luque, M. Bravo, A. Leon, C. Mayorga, C. Leyva, E. De Ramon DQB1* (*)0602 allele shows a strong association with multiple sclerosis in patients in Malaga, Spain J Neurol 251 2004 440
38. L. Fugger, R. Tisch, R. Libau, P. van Endert, H.O. McDevitt The role of human major histocompatibility complex (HLA) genes in disease C.R. Scriver A.L. Beaudet W.S. Sly D. Valle B. Childs K.W. Kinzler B. Vogelstein The metabolic and Molecular Basis of Inherited Disease 2001 McGraw Hill New York
39. P. Price, C. Witt, R. Allcock, D. Sayer, M. Garlepp, C.C. Kok, M. French, S. Mallal, F. Christiansen The genetic basis for the association of the 8.1 ancestral haplotype (A1, B8, DR3) with multiple immunopathological diseases Immunol Rev 167 1999 257
40. C. Gorodezky, C. Alaez, M.N. Vazquez-Garcia, G. de la Rosa, E. Infante, S. Balladares, R. Toribio, E. Perez-Luque, L. Muñoz The genetic structure of Mexican Mestizos of different locations tracking back their origins through MHC genes, blood group systems, and microsatellites Hum Immunol 62 2001 979
41. R.M. Cerda Flores, M.C. Villalobos Torres, H.A. Barrera Saldaña, L.M. Cortes-Prieto, L.O. Barajas, F. Rivas, A. Carracedo, Y. Zhong, S.A. Barton, R. Chakraborty Genetic admixture in three Mexican Mestizo populations based on D1S80 and HLA-DQA1 loci Am J Human Biol 14 2002 257
42. H. Yang, S.E. Plevy, K. Taylor, D. Tyan, N. Fischel-Ghodsian, C. McElree, S.R. Targan, J.I. Rotter Linkage of Crohn's disease to the major histocompatibility complex region is detected by multiple non-parametric analyses Gut 44 1999 519