Further characterization of 'sweet potato virus 2': A distinct species of the genus Potyvirus

Archives of Virology

Volumn 149, Issue 2, 2004, Pages 225-239

  Ateka, E M ^a,b   Barg, E ^b   Njeru, R W ^a   Lesemann, D E ^b   Vetten, H J ^b,c  

^a UNIVERSITY OF NAIROBI   (Kenya)

^b INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^c Institut PS   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS PROTEIN;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; CLASSIFICATION; CYTOPATHOGENIC EFFECT; DISEASE CARRIER; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; PLANT; PLANT DISEASE; POTYVIRUS; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; SWEET POTATO; TAIWAN; ULTRASTRUCTURE; VIROLOGY;

AMINO ACID SEQUENCE; ANIMALS; CYTOPATHOGENIC EFFECT, VIRAL; INSECT VECTORS; IPOMOEA BATATAS; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT DISEASES; PLANTS; POTYVIRUS; SEQUENCE ANALYSIS, RNA; SPECIES SPECIFICITY; TAIWAN; VIRAL STRUCTURAL PROTEINS;

ANIMALIA; CHENOPODIUM; DATURA; IPOMOEA; IPOMOEA BATATAS; MYZUS; MYZUS PERSICAE; NICOTIANA; POTYVIRIDAE; POTYVIRUS; PROKARYOTA; SOLANUM TUBEROSUM;

EID: 1042267651     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-003-0233-3     Document Type: Article

References (43)

1. Abad JA, Conkling MA, Moyer JW (1992) Comparison of the capsid protein cistron from serologically distinct strains of sweetpotato feathery mottle virus (SPFMV). Arch Virol 126: 147-157
2. Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller WW, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
3. Alvarez V, Ducasse DA, Biderbost E, Nome SF (1997) Sequencing and characterisation of the coat protein and 3′ non-coding region of a new sweet potato poty virus. Arch Virol 142: 1635-1644
4. Atreya PL, Lopez-Moya JJ, Chu M, Atreya CD, Pirone TP (1995) Mutational analysis of the coat protein N-terminal amino acids involved in potyvirus transmission by aphids. J Gen Virol 76: 265-270
5. Berger PH, Barnett OW, Brunt AA, Colinet D, Edwardson JR, Hammond J, Hill JH, Jordan RL, Kashiwazaki S, Makkouk KM, Morales FJ, Rybicki E, Spence N, Ohki ST, Uyeda I, van Zaayen A, Vetten HJ (2000) Family Potyviridae. pp 703-724. In: Van Regenmortel MHV, Fauquet CM, Bishop DHL, Carstens EB, Estes MK, Lemon SM, Maniloff J, Mayo MA, McGeoch DJ, Pringle CR, Wickner RB (eds) Virus Taxonomy. Classification and Nomenclature of Viruses. Seventh Report of the International Committee on Taxonomy of Viruses. Academic Press, San Diego, 1162 pp
6. Brandes J (1964) Identifizierung von gestreckten pflanzenpathogenen Viren auf morphologischer Grundlage. Mitt Biol Bundesanst Land-Forstwirtsch 110: 1-130
7. Brunt AA, Crabtree K, Dallwitz MJ, Gibbs AJ, Watson L (1996) Viruses of plants. Descriptions and Lists from the VIDE Database. CAB International, Wallingford, Oxon, UK, 1484 pp
8. Carey EE, Mwanga ROM, Fuentes S, Kasule S, Macharia C, Gichuki ST, Gibson RW (1996) Sweetpotato viruses in Uganda and Kenya: results of a survey. Proc Sixth Triennial Symposium of the International Society of Tropical Root Crops-Africa Branch (ISTRC-AB), October 22-28, 1995, Lilongwe, Malawi, pp 457-461
9. Castle SJ, Perring TM, Farrar CA, Kishaba AN (1992) Field and laboratory transmission of watermelon mosaic virus and zucchini yellow mosaic virus by various aphid species. Phytopathology 82: 235-240
10. Chavi FR, Robertson AI, Verduin BJM (1997) Survey and characterisation of viruses in sweet potato from Zimbabwe. Plant Dis 81: 1115-1122
11. CIP (1996) Global sector commodity analysis and impact assessment for sweet potato. International Potato Center, Lima, Peru, pp 5-9
12. CIP (1998) Annual Report 1998. International Potato Center (CIP). 1998, pp 8-9
13. Cohen J, Loebenstein G (1991) Role of a whitefly-transmitted agent in infection of sweet potato by cucumber mosaic virus. Plant Dis 75: 291-292
14. th Int Plant Virus Epidemiol Symposium p 42
15. Colinet D, Kummert J (1993) Identification of a sweet potato feathery mottle virus isolate from China (SPFMV-CH) by the polymerase chain reaction with degenerate primers. J Virol Methods 45: 149-159
16. Colinet D, Kummert J, Lepoivre P (1994) The complete nucleotide sequences of the coat protein cistron and the 3′ non-coding region of a newly-identified potyvirus infecting sweetpotato, as compared to those of sweet potato feathery mottle virus. Arch Virol 139: 327-336
17. Colinet D, Kummert J, Lepoivre P (1997) Evidence for the assignment of two strains of SPLV to the genus Potyvirus based on coat protein and 3′ non-coding region sequence data. Virus Res 49: 91-100
18. Colinet D, Nguyen M, Kummert J, Lepoivre P, Xia FZ (1998) Differentiation among potyviruses infecting sweet potato based on genus-and virus-specific reverse transcription polymerase chain reaction. Plant Dis 82: 223-229
19. Edwardson JR (1974) Some properties of the potato virus Y group. Florida Agricultural Experiment Station Monograph Series 4: 398 pp
20. Frenkel MJ, Ward CW, Shukla DD (1989) The use of the 3′ non-coding nucleotide sequences in the taxonomy of potyviruses: application to watermelon mosaic virus 2 and soybean mosaic virus-N. J Gen Virol 70: 2775-2783
21. Geddes AMW (1990) The relative importance of crop pests in sub-Saharan Africa. Natural Resources Institute Bulletin No 36, NRI, Kent, UK, pp 69
22. Gibson RW, Mpembe I, Alicai T, Carey EE, Mwange ROM, Seal SE, Vetten HJ (1998) Symptoms, etiology and serological analysis of sweet potato virus disease in Uganda. Plant Pathol 47: 95-102
23. Hollings M, Stone OM, Bock KR (1976) Purification and properties of sweet potato mild mottle, a whitefly-borne virus from sweet potato (Ipomoea batatas) in East Africa. Ann Appl Biol 82: 511-528
24. Karyeija RF, Gibson RW, Valkonen JPT (1998) The significance of sweet potato feathery mottle virus in subsistence sweet potato production in Africa. Plant Dis 82: 4-15
25. Karyeija RF, Kreuze JF, Gibson RW, Valkonen JP (2000) Synergistic interactions of a potyvirus and a phloem-limited crinivirus in sweet potato plants. Virology 269: 26-36
26. Kreuze JF, Karyeija RF, Gibson RW, Valkonen JPT (2000) Comparisons of coat protein gene sequences show that East African isolates of Sweet potato feathery mottle virus form a genetically distinct group. Arch Virol 145: 567-574
27. Langeveld SA, Dore J-M, Memelink J, Derks AFLM, Van der Vlugt CIM, Asjes CJ, Bol JF (1991) Identification of potyviruses using the polymerase chain reaction with degenerate primers. J Gen Virol 72: 1531-1541
28. Legavre T, Maia IG, Casse-Delbart F, Bernardi F, Robaglia C (1996) Switches in the mode of transmission select for or against a poorly aphid-transmissible strain of potato virus Y with reduced helper component and virus accumulation. J Gen Virol 77: 1343-1347
29. Liao CH, Chien IC, Chung ML, Chiu RJ, Han YH (1979) A study of sweet potato virus disease in Taiwan. I. Yellow spot virus. J Agric Res China 28: 127-138
30. Matin Q (1999) The economic effects of genetically modified orphan commodities; projections for sweet potato in Kenya. ISAAA Briefs, No. 13, 1999, Bonn 32 pp
31. Milne RG (1993) Electron microscopy of in vitro preparations. In: Matthews REF (ed) Diagnosis of plant virus diseases. CRC Press, Boca Raton, pp 215-251
32. Moyer JW, Salazar LF (1989) Viruses and virus-like diseases of sweetpotato. Plant Dis 73: 451-455
33. Mukasa SB, Rubaihayo PR, Valkonen JP (2003) Sequence variability within the 3′-proximal part of the Sweet potato mild mottle virus genome. Arch Virol 148: 487-496
34. Porth A (1986) Characterisation of potyvirus isolates from yam (Dioscorea alata L., D. rotundata Poir.) and sweet potato (Ipomoea batatas (L.) Poir) in West Africa (in German). Ph.D. thesis, University of Bonn, Faculty of Agric Sciences, 167 pp
35. Riedel D, Lesemann D-E, Maiss E (1998) Ultrastructural localization of nonstructural and coat proteins of 19 potyviruses using antisera to bacterially expressed proteins of plum pox potyvirus. Arch Virol 143: 2133-2158
36. Rossel HW, Thottappilly G (1988) Complex virus diseases of sweet potato. In: Exploration, Maintenance, and Utilization of Sweet Potato Genetic Resources. Report of the First Sweet Potato Planning Conference 1987. International Potato Center, Lima, Peru, pp 291-302
37. Ryu KH, Kim SJ, Park WM (1998) Nucleotide sequence analysis of the coat protein genes of two Korean isolates of sweet potato feathery mottle potyvirus. Arch Virol 143: 557-562
38. Sakai J, Mon M, Morishita T, Tanaka M, Hanada K, Usugi T, Nishiguchi M (1997) Complete nucleotide sequence of sweet potato feathery mottle virus (S strain) genomic RNA: the large coding region of the P1 gene. Arch Virol 142: 1553-1562
39. nd edn. Cold Spring Harbour Laboratory, Cold Spring Harbor
40. Schaefers GA, Terry ER (1976) Insect transmission of sweet potato virus disease agents in Nigeria. Phytopathology 66: 642-645
41. Shukla DD, Ward CW, Brunt AA (1994) The Potyviridae. CAB International, Wallingford, UK, 516 pp
42. Vetten HJ, Green SK, Lesemann D-E (1992) Characterization of peanut stripe virus isolates from soybean in Taiwan. J Phytopathol 135: 107-124
43. Woolfe AJ (1992) Sweet potato: An untapped food resource. Cambridge University Press, New York, 352 pp