Genetic diversity of Xanthomonas arboricola pv. fragariae strains and comparison with some other X. arboricola pathovars using repetitive PCR genomic fingerprinting

Journal of Phytopathology

Volumn 151, Issue 3, 2003, Pages 113-119

  Scortichini, M ^a,b   Rossi, M P ^a  

^a Istituto Sperimentale per la Frutticoltura   (Italy)

^b ISF   (Italy)

Author keywords

Juglandis; Pruni; Repetitive PCR; Strawberry leaf blight; Xanthomonas arboricola pvs. corylina

Indexed keywords

BACTERIUM; DNA FINGERPRINTING; PATHOLOGY; POLYMERASE CHAIN REACTION;

ENTEROBACTERIACEAE; FRAGARIA X ANANASSA; PROKARYOTA; STREPTOCOCCUS; STREPTOCOCCUS PNEUMONIAE; XANTHOMONAS; XANTHOMONAS ARBORICOLA; XANTHOMONAS ARBORICOLA PV. JUGLANDIS; XANTHOMONAS ARBORICOLA PV. PRUNI;

EID: 10244240609     PISSN: 09311785     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1439-0434.2003.00591.x     Document Type: Article

References (22)

1. Angeles-Ramos, R., A. K. Vidaver, P. Flynn (1991) Characterization of epiphytic Xanthomonas campestris pv. phaseoli and pectolytic xanthomonads recovered from symptomless weeds in the Dominican Republic. Phytopathology 81, 677-681
2. Dice, L. R. (1945): Measurement of the amount of ecological association between species. Ecology 26, 297-302
3. Gilbertson, R L., R. E. Rand, D. J. Hagedorn (1990): Survival of Xanthomonas campestris pv. phaseoli and pectolytic strains of Xanthomonas campestris in bean debris. Plant Dis. 74, 322-327.
4. Gitaitis, R. D., M J. Sasser, R. W. Beaver, T B. Mc Innes, R. E. Stall (1987) Pectolytic xanthomonads in mixed infections with Pseudomonas syringae pv. syringae, P. s. pv. tomato, and Xanthomonas campestris pv. vesicatoria in tomato and pepper transplants. Phytopathology 77, 611-615
5. Janse, J. D., M. P. Rossi, R. F. J. Gorkink, J. H. J. Derks, J Swings, D. Jannsens, M Scortichini (2001): Bacterial leaf blight of strawberry (Fragaria x ananassa) caused by a pathovar of Xanthomonas arboricola, not similar to Xanthomonas fragariae Kennedy & King. Description of the causal organism as Xanthomonas arboricola pv. fragariae (pv. nov., comb. nov.). Pl. Pathol. 50, 653-665.
6. Lelliott, R. A , D. E. Stead (1987): Methods for the diagnosis of bactenal diseases of plants. Blackwell Scientific Publications for the British Society of Plant Pathology, Oxford, UK.
7. Liao, G. H., J. M. Wells (1987): Association of pectolytic strains of Xanthomonas campestris with soft rots of fruits and vegetables at retail markets. Phytopathology 77, 418-422.
8. Louws, F J. D. W. Fullbright, C. T. Stephens, F. J. De Bruijn (1994): Specific genoinic fingerprints of phytopathogenic Xanthomonas and Pseudomonas pathovars and strains generated with repetitive sequences and PCR. Appl. Environ. Microbiol. 60, 2286-2295.
9. Louws, F. J., J. L. W. Rademaker, F. J. De Bruijn (1999): The three Ds of PCR-based genomic analysis of phytobacteria: diversity, detection, and disease diagnosis. Ann. Rev. Phytopath. 37, 81-125.
10. Maas, J. J., M. M. Finney, E. L. Civerolo, M. Sasser (1985): Association of an unusual strain of Xanthomonas campestris with apple. Phytopathology 75, 438-445.
11. Maynard Smith, J., N H. Smith, M O'Rourke, B G. Spratt (1993): How clonal are bacteria? Proc. Natl Acad. Sci. U.S.A. 90, 4384-4388.
12. Opgenorth, D. C., C D. Smart, F. J. Louws, F. J. De Bruijn, B. C. Kirkpatrick (1996): Identification of Xanthomonas fragariae field isolates by rep-PCR genomic fingerprinting. Plant Dis. 80, 868-873.
13. Pooler, M. R., D. F. Ritchie, J. S. Hartung (1996): Genetic relationships among strains of Xanthomonas fragariae based on random amplified polymorphic DNA PCR, repetitive extragenic palindromic PCR, and enterobacterial repetitive intergenic consensus PCR data and generation of multiplex PCR primers useful for the identification of this phytopathogen. Appl. Environ. Microbiol. 62, 3121-3127.
14. Rademaker, J. L. W., B. Hoste, F. J. Louws, K. Kersters, J. Swings, L. Vauterin, P. Vauterin, F. J. De Bruijn (2000): Comparison of AFLP and rep-PCR genomic fingerprinting with DNA-DNA homology studies: Xanthomonas as a model system. Int. J. Syst. Evol. Microbiol. 50, 665-677.
15. Roberts, P. D., N. C. Hodge, H. Bouzar, J. B. Jones, R. E. Stall, R. D. Berger, A. R. Chase (1998): Relatedeness of strains of Xanthomonas fragariae by restriction fragment length polymorphism, DNA-DNA reassociation, and fatty acid analysis. Appl. Environ. Microbiol. 64, 3961-3965.
16. Scortichini, M (1996): Una nuova batteriosi della fragola causata da Xanthomonas campestris. Frutticoltura LVIII (6), 51-53.
17. Scortichini, M., U. Marchesi, P. Di Prospero (2001): Genetic diversity of Xanthomonas arboricola pv. juglandis (synonyms: X. campestris pv juglandis; X. juglandis pv. juglandis) strains from different geographical areas shown by repetitive polymerase chain reaction J. Phytopathol. 149, 325-332.
18. Scortichini, M., M P. Rossi, U. Marchesi (2002): Genetic, phenotypic and pathogenic diversity of Xanthomonas arboricola pv. corylina strains question the representative nature of the type strain Pl. Pathol. 51 (in press).
19. Smith, J. J., L. C. Offord, M Holderness, G. S. Saddler (1995): Genetic diversity of Burkholderia solanacearum (synonym: Pseudomonas solanacearum) race 3 in Kenya. Appl. Environ. Microbiol. 61, 4263-4268.
20. Van den Mooter, M. M. Steenackers, C. Maertens, F. Gossele, P. de Vos, J. Swings, K. Kerters, J. de Ley (1987): Differentiation between Xanthomonas campestris pv. graminis (ISPP list 1980), pv. phleipratensis (ISPP list 1980) emend., pv. poae Egli and Schmidt 1982 and pv. arrenatheri Egli and Schmidt by numerical analysis of phenotypic features and protein gel electrophoresis. J. Phytopathol. 118, 135-156
21. Vauterin, L., B. Hoste, K. Kersters, J. Swings (1995): Reclassification of Xanthomonas. Int. J. Syst. Bacteriol. 45, 472-489.
22. Vauterin, L., P. Yang, A. Alvarez, Y. Takikawa, D. A. Roth, A. K. Vidaver, R. E. Stall, K. Kersters, J. Swings (1996): Identification of non-pathogenic Xanthomonas strains associated with plants. Syst. Appl. Microbiol 19, 96-105.