Architecture of coatomer: Molecular characterization of δ-COP and protein interactions within the complex

Journal of Cell Biology

Volumn 135, Issue 1, 1996, Pages 53-61

  Faulstich, D ^a   Auerbach, S ^a   Orci, L ^b   Ravazzola, M ^b   Wegehingel, S ^a   Lottspeich, F ^d   Stenbeck, G ^c   Harter, C ^a   Wieland, F T ^a   Tschochner, H ^a  

^a Institut fur Biochemie I   (Germany)

^b UNIVERSITY OF GENEVA MEDICAL SCHOOL   (Switzerland)

^c MEMORIAL SLOAN KETTERING CANCER CENTER   (United States)

^d MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN;

ARTICLE; CATTLE; GOLGI COMPLEX; INTRACELLULAR TRANSPORT; NONHUMAN; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; PROTEIN TRANSPORT;

AMINO ACID SEQUENCE; ANIMALS; BRAIN; CATTLE; CLONING, MOLECULAR; COATED VESICLES; COATOMER PROTEIN; DNA, COMPLEMENTARY; GENE EXPRESSION; GENES, LETHAL; GOLGI APPARATUS; LIVER; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; PRECIPITIN TESTS; RATS; RECOMBINANT FUSION PROTEINS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID;

BOS TAURUS; BOVINAE;

EID: 10144241679     PISSN: 00219525     EISSN: None     Source Type: Journal    
DOI: 10.1083/jcb.135.1.53     Document Type: Article

References (47)

1. Allen, J.B., M.B. Walberg, M.C. Edwards, and S.J. Elledge. 1995. Finding prospective partners in the library: the two-hybrid system and phage display lind a match. Trends Biochem. Sci. 20:511-516.
2. Balch, W.E., and J.E. Rothman. 1985. Characterization of protein transport between successive compartments of the Golgi apparatus: assymetric properties of donor and acceptor activities in a cell-free system. Arch. Biochem. Biophys. 240:413-425.
3. Balch, W.E., W.G. Dunphy, W.A. Braell, and J.E. Rothman. 1984. Reconstitution of the transport of protein between successive compartments of the Golgi measured by the coupled incorporation of N-acetylglucosamine. Cell. 39:405-416.
4. Breeden, L., and K. Nasmyth. 1985. Regulation of the yeast HO gene. Cold Spring Harbor Symp. Quant. Biol. 50:643-650.
5. Chien, C.T., P.L. Bartel, R. Sternglanz, and S. Fields. 1991. The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest. Proc. Natl. Acad. Sci. USA. 88:9578-9582.
6. Cosson, P., and F. Letourneur. 1994. Coatomer interaction with di-lysine endoplasmic reticulum retention motifs. Science (Wash. DC). 263:1629-1631.
7. Cosson, P., C. Démolliere, S. Hennecke, R. Duden, and F. Letourneur. 1996. δ- and ζ-COP, two coatomer subunits homologous to clathrin-associated proteins, are involved in ER retrieval. EMBO (Eur. Mol. Biol. Organ.) J. 15: 1792-1798.
8. Duden, R., G. Griffiths, R. Frank, P. Argus, and T.E. Kreis. 1991. Beta-COP, a 110 kd protein associated with non-clathrin-coated vesicles and the Golgi complex, shows homology to beta-adaptin. Cell. 64:649-665.
9. Duden, R., M. Hosobuchi, S. Hamamoto, M. Winey, B. Byers, and R. Schekman. 1994. Yeast Beta- and Beta′-coat proteins (COP). Two coatomer subunits essential for endoplasmic reticulum-to-Golgi protein traffic. J. Biol. Chem. 269:24486-24495.
10. Durfee, T., K. Becherer, P.L. Chen, S.H. Yeh, Y. Yang, A.E. Kilburn, W.H. Lee, and S.J. Elledge. 1993. The retinoblastoma protein associates with the protein phosphatase type 1 catalytic subunit. Genes Dev. 7:555-569.
11. Fields, S., and O. Song. 1989. A novel genetic system to detect protein-protein interactions. Nature (Lond). 340:245-246.
12. Frohman, M.A., M.K. Dush, and G.R. Martin. 1988. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucletide primer. Proc. Natl. Acad. Sci. USA. 85:8998-9002.
13. Gerich, B., L. Orci, H. Tschochner, F. Lottspeich, M. Ravazzola, M. Amherdt, F. Wieland, and C. Harter. 1995. Non-clathrin-coat protein Alpha is a conserved subunit of coatomer and in Saccharomyces cerevisiae is essential for growth. Proc. Natl. Acad. Sci. USA. 92:3229-3233.
14. Gietz, R.D., and R.H. Schiestl. 1991. Applications of high efficiency lithium acetate transformation of intact yeast cells using single-stranded nucleic acids as carrier. Yeast. 7:253-263.
15. Guarente, L. 1983. Yeast promoters and lacZ fusions designed to study expression of cloned genes in yeast. Methods Enzymol. 101:181-191.
16. Hara-Kuge, S., O. Kuge, L. Orci, M. Amherdt, M. Ravazzola, F.T. Wieland, and J.E. Rothman. 1994. En Bloc incorporation of coatomer subunits during the assembly of COP-coated vesicles. J. Cell Biol. 124:883-892.
17. Harlow, E., and D. Lane. 1988. Antibodies: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY. 77-81.
18. Harrison-Lavoie, K.J., V.A. Lewis, G.M. Hynes, K.S. Collison, E. Nutland, and K.R. Willison. 1993. A 102 kDa subunit of a Golgi-associated particle has homology to beta subunits of trimeric G proteins. EMBO (Eur. Mol. Biol. Organ.) J. 12:2847-2853.
19. Harter, C., E. Draken, F. Lottspeich, and F.T. Wieland. 1993. Yeast coatomer contains a subunit homologous to mammalian beta′-COP. FEBS Lett. 332: 71-73.
20. Harter, C., J. Pavel, F. Coccia, E. Draken, S. Wegehingel, H. Tschochner, and F. Wieland. 1996. Non-clathrin-coat protein γ, a subunit of coatomer, binds to the cytoplasmic di-lysine motif of membrane proteins of the early secretory pathway. Proc. Natl. Acad. Sci. USA. 93:1902-1906.
21. Hosobuchi, M., T. Kreis, and R. Schekman. 1992. SEC21 is a gene required for ER to Golgi protein transport that encodes a subunit of a yeast coatomer. Nature (Lond). 360:603-605.
22. Kaiser, C.A., and R. Schekman. 1990. Distinct sets of SEC genes govern transport vesicle formation and fusion early in the secretory pathway. Cell. 61: 723-733.
23. Kuge, O., K.S. Hara, L. Orci, M. Ravazzola, M. Amherdt, G. Tanigawa, F.T. Wieland, and J.E. Rothman. 1993. Zeta-COP, a subunit of coatomer, is required for COP-coated vesicle assembly. J. Cell Biol. 123:1727-1734.
24. Letourneur, F., E.C. Gaynor, S. Hennecke, C. Demolliere, R. Duden, S.D. Emr, H. Riezman, and P. Cosson. 1994. Coatomer is essential for retrieval of dilysine-tagged proteins to the endoplasmic reticulum. Cell. 79:1199-1207.
25. Lowe, M., and T.E. Kreis. 1995. In vitro assembly and disassembly of coatomer. J. Biol. Chem. 270:31364-31371.
26. Malhotra, V., T. Serafini, L. Orci, J.C. Shepherd, and J.E. Rothman. 1989. Purification of a novel class of coated vesicles mediating biosynthetic protein transport through the Golgi stack. Cell. 58:329-336.
27. Murakami, Y., M. Naitou, H. Hagiwara, T. Shibata, M. Ozawa, S.-I. Sasanuma, M. Sasanuma, Y. Tsuchiya, E. Soeda, K. Yokoyama, M. Yamazaki, H. Tashiro, and T. Eki. 1995. Analysis of the nucleotide sequence of chromosome VI from S. cerevisiae. Nat. Genet. 10:261-268.
28. Nakayama, Y., M. Goebel, G.B. O'Brine, S. Lemmon, C.E. Pingchang, and T. Kirchhausen. 1991. The medium chains of the mammalian clathrin-associated proteins have a homolog in yeast. Eur. J. Biochem. 202:569-574.
29. Neer, E.J., C.J. Schmidt, R. Nambudripad, and T.F. Smith. 1994. The ancient regulatory-protein family of WD-repeat proteins. Nature (Lond.). 371: 297-300.
30. Nilsson, T., M. Jackson, and P.A. Peterson. 1989. Short cytoplasmic sequences serve as retention signals for transmembrane proteins in the endoplasmic reticulum. Cell. 58:707-718.
31. Orci, L., B.S. Glick, and J.E. Rothman. 1986. A new type of coated vesicular carrier that appears not to contain clathrin: its possible role in protein transport within the Golgi stack. Cell. 46:171-184.
32. Orci, L., V. Malhotra, M. Amherdt, T. Serafini, and J.E. Rothman. 1989. Dissection of a single round of vesicular transport: sequential intermediates for intercisternal movement in the Golgi stack. Cell. 56:357-368.
33. Orci, L., D.J. Palmer, M. Ravazzola, A. Perrelet, M. Amherdt, and J.E. Rothman. 1993. Budding from Golgi membranes requires the coatomer complex of non-clathrin coat proteins. Nature (Lond.). 362:648-652.
34. Palade, G. 1975. Intracellular aspects of the process of protein synthesis. Science (Wash. DC). 189:347-358.
35. Radice, P., V. Pensotti, C. Jones, H. Perry, M.A. Pierotti, and O. Tunnacliffe. 1995. The human archain gene, ARCN1, has highly conserved homologs in rice. Genomics. 26:101-106.
36. Rose, M.D., F. Winston, and P. Hieter. 1990. Methods in Yeast Genetics: A Laboratory Course Manual. Cold Spring Harbor Laboratory, Plainview, NY. 61-65.
37. Roth, J., M. Bendayan, and L. Orci. 1978. Ultrastructural localisation of intracellular antigens by the use of protein A-gold complex. J. Histochem. Cytochem. 26:1074-1081.
38. Rothman, J.E. 1994. Mechanisms of intracellular protein transport. Nature (Lond.). 372:55-63.
39. Sambrook, J., E.F. Fritsch, and T. Maniatis. 1989. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
40. Serafini, T., G. Stenbeck, A. Brecht, F. Lottspeich, L. Orci, J.E. Rothman, and E.T. Wieland. 1991a. A coat subunit of Golgi-derived non-clathrin-coated vesicles with homology to the clathrin-coaled vesicle coat protein beta-adaplin. Nature (Lond.). 349:215-220.
41. Serafini, T., L. Orci, M. Amherdt, M. Brunner, R.A. Kahn, and J. E. Rothman. 1991b. ADP-ribosylation factor is a subunit of the coat of Golgi-derived COP-coated vesicles: a novel role for a GTP-binding protein. Cell. 67:239-253.
42. Stenbeck, G., C. Harter, A. Brecht, D. Herrmann, F. Lottspeich, L. Orci, and F.T. Wieland. 1993. Beta′-COP, a novel subunit of coatomer. EMBO (Eur. Mol. Biol. Organ.) J. 12:2841-2845.
43. Stenbeck, G., R. Schreiner, D. Herrmann, S. Auerbach, F. Lottspeich, J.E. Rothman, and F.T. Wieland. 1992. Gamma-COP, a coat subunit of non-clathrin-coated vesicles with homology to Sec21p. FEBS Lett. 314:195-198.
44. Tanigawa, G., L. Orci, M. Amherdt, M. Ravazzola, J.B. Helms, and J.E. Rothman. 1993. Hydrolysis of bound GTP by ARF protein triggers uncoating of Golgi-derived COP-coated vesicles. J. Cell Biol. 123:1365-1371.
45. Tokuyasu, K.T. 1986. Application of cryoultramicrotomy to immunocytochemistry. J. Micros. 143:143-149.
46. Waters, M.G., T. Serafini, and J.E. Rothman. 1991. 'Coatomer': a cytosolic protein complex containing subunits of non-clathrin-coated Golgi transport vesicles. Nature (Lond.). 349:248-251.
47. Wuestehube, L.J., R. Duden, A. Eun, S. Hamamoto, P. Korn, R. Ram, and R. Schekman. 1996. New mutants of Saccharomyces cerevisiae affected in the transport of proteins from the endoplasmic reticulum to the Golgi complex. Genetics. 142:393-406.