Degradation of outer membrane proteins of Synechococcus sp. in vitro and in situ

Journal of Oceanography

Volumn 60, Issue 5, 2004, Pages 825-833

  Miyoshi, Tatsuo ^a   Suzuki, Satoru ^a  

^a EHIME UNIVERSITY   (Japan)

Author keywords

Dissolved organic matter (DOM); Outer membrane protein; Porin; Synechococcus

Indexed keywords

CYANOBACTERIUM;

EID: 10044268645     PISSN: 09168370     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10872-004-5775-9     Document Type: Article

References (35)

1. Bond, J. S. (1989): Commercially available proteases. p. 239. In Proteolytic Enzymes, A Practical Approach, ed. by R. J. Beynon and J. S. Bond, IRL Press at Oxford University Press, NY.
2. Borch, N. H. and D. L. Kirchman (1999): Protection of protein from bacterial degradation by submicron particles. Aquat. Microb. Ecol., 16, 265-272.
3. Campbell, L. and D. Vaulot (1993): Photosynthetic picoplankton community structure in the subtropical North Pacific Ocean near Hawaii (station ALOHA). Deep-Sea Res. I, 40, 2043-2060.
4. Drews, G. and J. Weckesser (1982): Function, structure and composition of cell walls and external layers. p. 333-357. In The Biology of Cyanobacteria, ed. by N. G. Carr and B. A. Whitton, Blackwell Scientific Publications, Oxford.
5. Egli, T. (1995): The ecological and physiological significance of the growth of heterotrophic microorganisms with mixture of substrates. Adv. Microb. Ecol., 14, 305-386.
6. Fallon, R. D. and I. D. Brock (1979): Decomposition of blue-green algal (cyanobacteria) blooms in Lake Mendota, Wisconsin. Appl. Environ. Microbiol., 37, 820-830.
7. Gunnison, D. and M. Alexander (1975a): Basis for the resistance of several algae to microbial decomposition. Appl. Microbiol., 29 729-738.
8. Gunnison, D. and M. Alexander (1975b): Resistance and susceptibility of algae to decomposition by natural microbial communities. Limnol. Oceanogr., 20, 64-70.
9. Hansel, A. and M. H. Tadros (1998): Characterization of two pore-forming proteins isolated from the outer membrane of Synechococcus PCC 6301. Current Microbiology, 36, 321-326.
10. Hansel, A., A. Schmid, M. H. Tadros and U. J. Jürgens (1994): Isolation and characterization of porin from the outer membrane of Synechococcus PCC 6301. Arch. Microbiol., 161, 163-167.
11. Hansel, A., F. Pattus, U. J. Jürgens and M. H. Tadros (1998): Cloning and characterization of the genes coding for two porins in the unicellular cyanobacteria Synechococcus PCC 6301. Biochim. Biophys. Acta, 1399, 31-39.
12. Hansen, L., G. F. Krog and M. Søndergaard (1986): Decomposition of lake phytoplankton. 1. Dynamics of short-term decomposition. OIKOS, 46, 37-44.
13. Hino, S. (1988): Extracellular release of organic matter associated with the physiological state of freshwater blue-green algae. Archiv fur Hydrobiologie, 113, 307-317.
14. Hoiczyk, E. and A. HaNsel (2000): Cyanobacterial cell walls: news from unusual prokaryotic envelope. J. Bacteriol., 182, 1191-1199.
15. Höltje, J. V. (19T5): From growth to autolysis: the murein hydrolases in Escherichia coli. Arch. Microbiol., 164, 243-254.
16. Jürgens, U. J. and R. Benz (1989): Pore-forming activity of outer membrane extracts from the unicellular cyanobacteria Synechocystis sp. PCC 6714. Z Naturforsch, 44c, 147-151.
17. Jürgens, U. J., J. R. Golecki and W. Jürgens (1985): Characterization of the cell wall of the unicellular cyanobacterium Synechocystis PCC 6714. Arch. Microbiol., 142, 168-174.
18. Koebnik, R., K. P. Locher and P. V. Gelder (2000): Structure and function of bacterial outer membrane proteins: Barrels in a nutshell. Mol. Microbiol., 37, 239-253.
19. Koga, T. and T. Kawata (1983): Isolation and partial properties of a porin-like protein from Vibrio parahaemolyticus cell envelope. Microbiology and Immunology, 27, 861-867.
20. Krog, G. F., L. Hansen and M. Søndergaard (1986): Decomposition of lake phytoplankton. 2. Composition and lability of lysis products. OIKOS 46, 45-50.
21. Laemmli, U. K. (1970): Cleavage of structual proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
22. Martinez, J. and F. Azam (1993): Aminopeptidase activity in marine chroococcoid cyanobacteria. Appl. Environ. Microbiol., 59, 3701-3707.
23. Martinez, J., D. C. Smith, G. F. Steward and F. Azam (1996): Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate processing in the sea. Aquat. Microb. Ecol., 10, 223-230.
24. Nagata, T. and D. L. Kirchman (1992): Release of macromolecular organic complexes by heterotrophic marine flagellates. Mar. Ecol. Prog. Ser. 83, 233-240.
25. Nagata, T., R. Fukuda, I. Koike, K. Kogure and D. L. Kirchman (1998): Degradation by bacteria of membrane and soluble protein in seawater. Aquat. Microb. Ecol., 14, 29-37.
26. Nikaido, H. and M. Vaara (1985): Molecular basis of bacterial outer membrane permeability. Microbiology Review, 49, 1-32.
27. Nurminen, M. (1978): A mild procedure to isolate the 34K, 35K, and 36K porins of the outer membrane of Salmonella typhimurium. FEMS Microbiology Letters, 3, 331-334.
28. Rosenbusch, J. P. (1974): Characterization of the major envelope protein from Escherichia coli. J. Biol. Chem., 249, 8019-8029.
29. Schulz, G. ES (1993): Bacterial porins: structure and function. Curr. Opin. Cell Biol., 5, 701-707.
30. Shibata, A., K. Kogure, I. Koike and K. Ohwada (1997): Formation of submicron colloidal particles from marine bacteria by viral infection. Mar. Ecol. Prog. Ser., 155, 303-307.
31. Suzuki, S., K. Kogure and E. Tanoue (1997): Immunochemical detection of dissolved proteins and their source bacteria in marine environment. Mar. Ecol. Prog. Ser., 158, 1-9.
32. Tanoue, E., S. Nishiyama, M. Kamo and A. Tsugita (1995): Bacterial membranes: Possible source of a major dissolved protein in seawater. Geochim. Cosmochim. Acta, 59, 2643-2648.
33. Tanoue, E., M. Ishii and T. Midorikawa (1996): Discrete dissolved and particulate proteins in oceanic waters. Limnol. Oceanogr., 41 1334-1343.
34. Watanabe, M. M., M. Kawachi, M. Hiroki and F. Kasai (2000): In NIES Collection. List of Strains. Sixth edition. Microalgae and Protozoa. National Institute for Environmental Studies Environment Agency, Japan, p. 35-38.
35. Waterbury, J. B., S. W. Watson, F. W. Valois and D. G. Franks (1986): Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus. In Photosynthetic Picoplankton, Can. Bull. Fish. Aquat. Sci., p. 71-120.