-
2
-
-
0001614967
-
The dissimilatory sulfate-reducing and sulfur-reducing bacteria
-
(Balows, A., Truper, H.G., Dworkin, M., Harder, W. and Schleifer, K.-H., Eds.) Springer Verlag, New York.
-
Widdel, F. and Hansen, T. (1992) The dissimilatory sulfate-reducing and sulfur-reducing bacteria. In: The Prokaryotes, 2nd Edn. (Balows, A., Truper, H.G., Dworkin, M., Harder, W. and Schleifer, K.-H., Eds.), pp. 583-610. Springer Verlag, New York.
-
(1992)
The Prokaryotes, 2nd Edn.
, pp. 583-610
-
-
Widdel, F.1
Hansen, T.2
-
3
-
-
0001785214
-
Characteristics and activities of sulfate-reducing bacteria
-
(Barton, L.L., Ed.) Peplum Press, New York.
-
Barton, L.L., and Tomei, F.A. (1995) Characteristics and activities of sulfate-reducing bacteria. In: Sulfate-reducing Bacteria, Vol. 8 (Barton, L.L., Ed.), pp. 1-32. Peplum Press, New York.
-
(1995)
Sulfate-reducing Bacteria
, vol.8
, pp. 1-32
-
-
Barton, L.L.1
Tomei, F.A.2
-
4
-
-
0019999242
-
Mineralization of organic matter in the sea bed - The role of sulphate reduction
-
Jorgensen B.B. Mineralization of organic matter in the sea bed - the role of sulphate reduction. Nature. 296:1982;443-645.
-
(1982)
Nature
, vol.296
, pp. 443-645
-
-
Jorgensen, B.B.1
-
5
-
-
0035951525
-
Chemical speciation of sulfur compounds in surface sediments from three bays (Fresnaye, Seine and Authie) in northern France, and identification of some factors controlling their generation
-
Billon G., Ouddane B., Boughriet A. Chemical speciation of sulfur compounds in surface sediments from three bays (Fresnaye, Seine and Authie) in northern France, and identification of some factors controlling their generation. Talanta. 53:2001;971-981.
-
(2001)
Talanta
, vol.53
, pp. 971-981
-
-
Billon, G.1
Ouddane, B.2
Boughriet, A.3
-
6
-
-
0033758582
-
Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology
-
Amann R., Ludwig W. Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology. FEMS Microbiol. Ecol. 24:2000;555-565.
-
(2000)
FEMS Microbiol. Ecol.
, vol.24
, pp. 555-565
-
-
Amann, R.1
Ludwig, W.2
-
7
-
-
84951576810
-
A comparison of methods for the quantification of bacterial sulfate reduction in coastal marine sediments
-
Jorgensen B.B. A comparison of methods for the quantification of bacterial sulfate reduction in coastal marine sediments. Geomicrobiol. J. 1:1978;49-64.
-
(1978)
Geomicrobiol. J.
, vol.1
, pp. 49-64
-
-
Jorgensen, B.B.1
-
8
-
-
0035021398
-
Sulfate reduction dynamics and enumeration of sulfate-reducing bacteria in hypersaline sediments of the Great Salt Lake (Utah, USA)
-
Brandt K.K., Vester F., Jensen A.N., Ingvorsen K. Sulfate reduction dynamics and enumeration of sulfate-reducing bacteria in hypersaline sediments of the Great Salt Lake (Utah, USA). Microb. Ecol. 41:2001;1-11.
-
(2001)
Microb. Ecol.
, vol.41
, pp. 1-11
-
-
Brandt, K.K.1
Vester, F.2
Jensen, A.N.3
Ingvorsen, K.4
-
9
-
-
0031903824
-
Sulfate-reducing bacteria and their activities in cyanobacterial mats of Solar Lake (Sinai, Egypt)
-
Teske A., Ramsing N.B., Habicht K., Fukui M., Küver J., Jorgensen B.B., Cohen Y. Sulfate-reducing bacteria and their activities in cyanobacterial mats of Solar Lake (Sinai, Egypt). Appl. Environ. Microbiol. 64:1998;2943-2951.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 2943-2951
-
-
Teske, A.1
Ramsing, N.B.2
Habicht, K.3
Fukui, M.4
Küver, J.5
Jorgensen, B.B.6
Cohen, Y.7
-
10
-
-
0031804014
-
Improved Most-Probable-Number method to detect sulfate-reducing bacteria with natural media and a radiotracer
-
Vester F., Ingvorsen K. Improved Most-Probable-Number method to detect sulfate-reducing bacteria with natural media and a radiotracer. Appl. Environ. Microbiol. 64:1998;1700-1707.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1700-1707
-
-
Vester, F.1
Ingvorsen, K.2
-
11
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann R.I., Ludwig W., Schleifer K.-H. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:1995;143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.-H.3
-
12
-
-
0033857193
-
Community structure, cellular rRNA content and activity of sulfate reducing bacteria in marine arctic sediments
-
Ravenschlag K., Sahm K., Knoblauch C., Jorgensen B.B., Amann R. Community structure, cellular rRNA content and activity of sulfate reducing bacteria in marine arctic sediments. Appl. Environ. Microbiol. 66:2000;3592-3602.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3592-3602
-
-
Ravenschlag, K.1
Sahm, K.2
Knoblauch, C.3
Jorgensen, B.B.4
Amann, R.5
-
13
-
-
0032851739
-
Phylogenetic affiliation and quantification of psychrophilic sulfate-reducing bacteria isolates in marine arctic sediments
-
Sahm K., Knoblauch C., Amann R. Phylogenetic affiliation and quantification of psychrophilic sulfate-reducing bacteria isolates in marine arctic sediments. Appl. Environ. Microbiol. 65:1999;3976-3981.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3976-3981
-
-
Sahm, K.1
Knoblauch, C.2
Amann, R.3
-
14
-
-
0032746992
-
Analyses of spatial distributions of sulfate-reducing bacteria and their activity in aerobic wastewater biofilms
-
Okabe S., Itoh T., Satoh H., Watanabe Y. Analyses of spatial distributions of sulfate-reducing bacteria and their activity in aerobic wastewater biofilms. Appl. Environ. Microbiol. 65:1999;5107-5116.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 5107-5116
-
-
Okabe, S.1
Itoh, T.2
Satoh, H.3
Watanabe, Y.4
-
15
-
-
0035158607
-
Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard)
-
Ravenschlag K., Sahm K., Amann R. Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard). Appl. Environ. Microbiol. 67:2001;387-395.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 387-395
-
-
Ravenschlag, K.1
Sahm, K.2
Amann, R.3
-
16
-
-
0033862808
-
Basic principles of quantitative PCR
-
Rayemaekers L. Basic principles of quantitative PCR. Mol. Biotechnol. 15:2000;115-122.
-
(2000)
Mol. Biotechnol.
, vol.15
, pp. 115-122
-
-
Rayemaekers, L.1
-
17
-
-
0033766069
-
Rapid detection and quantification of members of the Archaeal community by quantitative PCR using fluorogenic probes
-
Takai K., Hirokoshi K. Rapid detection and quantification of members of the Archaeal community by quantitative PCR using fluorogenic probes. Appl. Environ. Microbiol. 66:2000;5066-5072.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 5066-5072
-
-
Takai, K.1
Hirokoshi, K.2
-
18
-
-
0035379677
-
Application of the 5′-fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments
-
Stults J.R., Snoeyenbos-West O., Methe B., Lovley D.R., Chandler D.P. Application of the 5′-fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments. Appl. Environ. Microbiol. 67:2001;2781-2789.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2781-2789
-
-
Stults, J.R.1
Snoeyenbos-West, O.2
Methe, B.3
Lovley, D.R.4
Chandler, D.P.5
-
19
-
-
0036324122
-
Real-time PCR quantification of rbcL (ribulose-1,5-bisphosphate carboxylase/oxygenase) mRNA in diatoms and pelagophytes
-
Wawrick B., Paul J.H., Tabita F.R. Real-time PCR quantification of rbcL (ribulose-1,5-bisphosphate carboxylase/oxygenase) mRNA in diatoms and pelagophytes. Appl. Environ. Microbiol. 68:2002;3771-3779.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 3771-3779
-
-
Wawrick, B.1
Paul, J.H.2
Tabita, F.R.3
-
20
-
-
0035379562
-
Quantitation of viral DNA by real-time PCR applying duplex amplification, internal standardization, and two-colour fluorescence detection
-
Gruber F., Falkner F.G., Dorner F., Hämmerle T. Quantitation of viral DNA by real-time PCR applying duplex amplification, internal standardization, and two-colour fluorescence detection. Appl. Environ. Microbiol. 67:2001;2837-2839.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2837-2839
-
-
Gruber, F.1
Falkner, F.G.2
Dorner, F.3
Hämmerle, T.4
-
21
-
-
0027195585
-
Absolute quantification of target DNA: A simple competitive PCR for efficient analysis of multiple samples
-
Zachar V., Thomas R.A., Goustin A.S. Absolute quantification of target DNA: a simple competitive PCR for efficient analysis of multiple samples. Nucleic Acids Res. 21:1993;2017-2018.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 2017-2018
-
-
Zachar, V.1
Thomas, R.A.2
Goustin, A.S.3
-
22
-
-
0029137507
-
An evaluation of competitor type and size for use in the determination of mRNA by competitive PCR
-
MacCulloch R.K., Choong C.S., Hurley D.M. An evaluation of competitor type and size for use in the determination of mRNA by competitive PCR. PCR Methods Appl. 4:1995;219-225.
-
(1995)
PCR Methods Appl.
, vol.4
, pp. 219-225
-
-
MacCulloch, R.K.1
Choong, C.S.2
Hurley, D.M.3
-
23
-
-
0033149867
-
Quantification of nitrifying bacteria of the genus Nitrobacter in an aquatic system (Seine estuary, France)
-
Berthe T., Garnier J., Petit F. Quantification of nitrifying bacteria of the genus Nitrobacter in an aquatic system (Seine estuary, France). C.R. Acad. Sci. Paris III Sci. Vie. 322:1999;517-526.
-
(1999)
C.R. Acad. Sci. Paris III Sci. Vie
, vol.322
, pp. 517-526
-
-
Berthe, T.1
Garnier, J.2
Petit, F.3
-
24
-
-
0034869742
-
Estimation of the abundance of the cadmium resistance gene cadA in microbial communities in polluted estuary water
-
Oger C., Berthe T., Quillet L., Barray S., Chiffoleau J-F., Petit F. Estimation of the abundance of the cadmium resistance gene cadA in microbial communities in polluted estuary water. Res. Microbiol. 152:2001;671-678.
-
(2001)
Res. Microbiol.
, vol.152
, pp. 671-678
-
-
Oger, C.1
Berthe, T.2
Quillet, L.3
Barray, S.4
Chiffoleau, J.-F.5
Petit, F.6
-
25
-
-
0032722031
-
Competitive polymerase chain reaction for quantification of nonculturable Enterococcus faecalis cells in lake water
-
Del Mar Lleo M., Tafi M.C., Signoretto C., Dal Cero C., Canepari P. Competitive polymerase chain reaction for quantification of nonculturable Enterococcus faecalis cells in lake water. FEMS Microbiol. Ecol. 30:1999;345-353.
-
(1999)
FEMS Microbiol. Ecol.
, vol.30
, pp. 345-353
-
-
Del Mar Lleo, M.1
Tafi, M.C.2
Signoretto, C.3
Dal Cero, C.4
Canepari, P.5
-
26
-
-
0031933452
-
Detection of Clostridium proteoclasticum and closely related strains in the rumen by competitive PCR
-
Reilly K., Atwood G.T. Detection of Clostridium proteoclasticum and closely related strains in the rumen by competitive PCR. Appl. Environ. Microbiol. 64:1998;907-913.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 907-913
-
-
Reilly, K.1
Atwood, G.T.2
-
27
-
-
0034016511
-
Quantitative analysis of ammonia oxidising bacteria using competitive PCR
-
Phillips C.J., Paul E.A., Prosser J.I. Quantitative analysis of ammonia oxidising bacteria using competitive PCR. FEMS Microbiol. Ecol. 32:2000;167-175.
-
(2000)
FEMS Microbiol. Ecol.
, vol.32
, pp. 167-175
-
-
Phillips, C.J.1
Paul, E.A.2
Prosser, J.I.3
-
28
-
-
0036944625
-
Competitive PCR for quantitation of a Cytophaga-Flexibacter-Bacteroides phylum bacterium associated with the Tuber borchii vittad. mycelium
-
Barbieri E., Riccioni G., Pisano A., Sisti D., Zeppa S., Agostini D., Stocchi V. Competitive PCR for quantitation of a Cytophaga-Flexibacter- Bacteroides phylum bacterium associated with the Tuber borchii vittad. mycelium. Appl. Environ. Microbiol. 68:2002;6421-6424.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 6421-6424
-
-
Barbieri, E.1
Riccioni, G.2
Pisano, A.3
Sisti, D.4
Zeppa, S.5
Agostini, D.6
Stocchi, V.7
-
29
-
-
0036068290
-
Enumerating ammonia-oxidising bacteria in environmental samples using competitive PCR
-
Bjerrum L., Kjær T., Ramsing N.B. Enumerating ammonia-oxidising bacteria in environmental samples using competitive PCR. J. Microbiol. Methods. 51:2002;227-239.
-
(2002)
J. Microbiol. Methods
, vol.51
, pp. 227-239
-
-
Bjerrum, L.1
Kjær, T.2
Ramsing, N.B.3
-
30
-
-
0035720350
-
Spatiotemporal changes in cadmium contamination in the Seine estuary (France)
-
Chiffoleau J.-F., Auger D., Chartier E., Michel P., Truquet I., Ficht A., Gonzalez J.-L., Romana L.-A. Spatiotemporal changes in cadmium contamination in the Seine estuary (France). Estuaries. 24:2001;1029-1040.
-
(2001)
Estuaries
, vol.24
, pp. 1029-1040
-
-
Chiffoleau, J.-F.1
Auger, D.2
Chartier, E.3
Michel, P.4
Truquet, I.5
Ficht, A.6
Gonzalez, J.-L.7
Romana, L.-A.8
-
31
-
-
0028869891
-
Conservation of the genes for dissimilatory sulfite reductase from Desulfovibrio vulgaris and Archaeoglobus fulgidus allows their detection by PCR
-
Karkhoff-Schweizer R.R., Huber D.P.W., Voordouw G. Conservation of the genes for dissimilatory sulfite reductase from Desulfovibrio vulgaris and Archaeoglobus fulgidus allows their detection by PCR. Appl. Environ. Microbiol. 61:1995;290-296.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 290-296
-
-
Karkhoff-Schweizer, R.R.1
Huber, D.P.W.2
Voordouw, G.3
-
32
-
-
0032463021
-
Phylogeny of dissimilatory reductases supports an early origin of sulfate respiration
-
Wagner M., Roger A., Flax J., Brusseau G., Stahl D. Phylogeny of dissimilatory reductases supports an early origin of sulfate respiration. J. Bacteriol. 180:1998;2975-2982.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2975-2982
-
-
Wagner, M.1
Roger, A.2
Flax, J.3
Brusseau, G.4
Stahl, D.5
-
33
-
-
0842341687
-
Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes
-
Klein M., Friedrich M., Roger A.J., Hugenholtz P., Fishbain S., Abicht H., Blackall L.L., Stahl D.A., Wagner M. Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes. Appl. Environ. Microbiol. 67:2001;6028-6035.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 6028-6035
-
-
Klein, M.1
Friedrich, M.2
Roger, A.J.3
Hugenholtz, P.4
Fishbain, S.5
Abicht, H.6
Blackall, L.L.7
Stahl, D.A.8
Wagner, M.9
-
34
-
-
0003903343
-
-
Cold Spring harbor Laboratory Press, Cold Spring Harbor, NY.
-
Sambrook, J., Fristch, E.F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Edn. Cold Spring harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fristch, E.F.2
Maniatis, T.3
-
36
-
-
0029988977
-
Depth profile of sulfate-reducing bacterial ribosomal RNA and mercury methylation in estuarine sediment
-
Devereux R., Winfrey M.R., Winfrey J., Stahl D. Depth profile of sulfate-reducing bacterial ribosomal RNA and mercury methylation in estuarine sediment. FEMS Microbiol. Ecol. 20:1996;23-31.
-
(1996)
FEMS Microbiol. Ecol.
, vol.20
, pp. 23-31
-
-
Devereux, R.1
Winfrey, M.R.2
Winfrey, J.3
Stahl, D.4
-
37
-
-
0032844705
-
Community size and metabolic rates of psychrophilic sulfate-reducing bacteria in Arctic marine sediments
-
Knoblauch C., Jorgensen B.B., Harder J. Community size and metabolic rates of psychrophilic sulfate-reducing bacteria in Arctic marine sediments. Appl. Environ. Microbiol. 65:1999;4230-4233.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4230-4233
-
-
Knoblauch, C.1
Jorgensen, B.B.2
Harder, J.3
-
38
-
-
0032896139
-
Seasonal changes in ribosomal RNA of sulfate-reducing bacteria and sulfate-reducing activity in a freshwater lake sediment
-
Li J.-H., Purdy K.J., Takii S., Hayashi H. Seasonal changes in ribosomal RNA of sulfate-reducing bacteria and sulfate-reducing activity in a freshwater lake sediment. FEMS Microbiol. Ecol. 28:1999;31-39.
-
(1999)
FEMS Microbiol. Ecol.
, vol.28
, pp. 31-39
-
-
Li, J.-H.1
Purdy, K.J.2
Takii, S.3
Hayashi, H.4
-
39
-
-
0032864978
-
Unexpected population distribution in a microbial mat community: Sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia
-
Minz D., Fishbain S., Green S.J., Muyzer G., Cohen Y., Rittmann B.E., Stahl D. Unexpected population distribution in a microbial mat community: sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia. Appl. Environ. Microbiol. 65:1999;4659-4665.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4659-4665
-
-
Minz, D.1
Fishbain, S.2
Green, S.J.3
Muyzer, G.4
Cohen, Y.5
Rittmann, B.E.6
Stahl, D.7
-
40
-
-
0034942587
-
Use of 16SrRNA-targeted oligonucleotide probes to investigate the distribution of sulfate-reducing bacteria in estuarine sediments
-
Purdy K.J., Nedwell D.B., Embley T.M., Takii S. Use of 16SrRNA-targeted oligonucleotide probes to investigate the distribution of sulfate-reducing bacteria in estuarine sediments. FEMS Microbiol. Ecol. 36:2001;165-168.
-
(2001)
FEMS Microbiol. Ecol.
, vol.36
, pp. 165-168
-
-
Purdy, K.J.1
Nedwell, D.B.2
Embley, T.M.3
Takii, S.4
-
41
-
-
0033068882
-
Sulfate reduction and vertical distribution of sulfate-reducing bacteria quantified by rRNA slot-blot hybridization in a coastal marine sediment
-
Sahm K., MacGregor B.J., Jorgensen B.B., Stahl D.A. Sulfate reduction and vertical distribution of sulfate-reducing bacteria quantified by rRNA slot-blot hybridization in a coastal marine sediment. Environ. Microbiol. 1:1999;65-74.
-
(1999)
Environ. Microbiol.
, vol.1
, pp. 65-74
-
-
Sahm, K.1
MacGregor, B.J.2
Jorgensen, B.B.3
Stahl, D.A.4
-
42
-
-
0025921591
-
Pathways and microbiology of thiosulfate transformations and sulfate reduction in a marine sediment (Kattegat, Denmark)
-
Jorgensen B.B., Bak F. Pathways and microbiology of thiosulfate transformations and sulfate reduction in a marine sediment (Kattegat, Denmark). Appl. Environ. Microbiol. 57:1991;847-856.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 847-856
-
-
Jorgensen, B.B.1
Bak, F.2
-
43
-
-
0033851520
-
The biogeochemistry, stable isotope geochemistry, and microbial community structure of a temperate intertidal mudflat: An integrated study
-
Böttcher M.E., Hespenheide B., Llobet-Brossa E., Beardsley O.L., Schramm A., Wieland A., Böttcher G., Berninger U.G., Amann R. The biogeochemistry, stable isotope geochemistry, and microbial community structure of a temperate intertidal mudflat: an integrated study. Cont. Shelf Res. 20:2000;1749-1769.
-
(2000)
Cont. Shelf Res.
, vol.20
, pp. 1749-1769
-
-
Böttcher, M.E.1
Hespenheide, B.2
Llobet-Brossa, E.3
Beardsley, O.L.4
Schramm, A.5
Wieland, A.6
Böttcher, G.7
Berninger, U.G.8
Amann, R.9
|