메뉴 건너뛰기




Volumn 49, Issue 9, 2003, Pages 549-555

Endophytic nifH gene diversity in African sweet potato

Author keywords

Endophytes; nifH; Nitrogen fixation; Nitrogenase reductase; Sweet potato

Indexed keywords

CLONING; ESCHERICHIA COLI; GENES; SOILS;

EID: 0348014402     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/w03-070     Document Type: Article
Times cited : (70)

References (49)
  • 2
    • 12644298689 scopus 로고    scopus 로고
    • Emended descriptions of Herbaspirillum; inclusion of [Pseudomonas] rubisualbicans, a mild pathogen, as Herbaspirillum rubisualbicans comb, nov.; and classification of a group of clinical isolates (EF group 1) as Herbaspirillum species 3
    • Baldani, J.I., Pot, B., Kirchhof, G., Falsen, E., Baldani, V.L.D., Olivares, F.L., Hoste, B., Kersters, K., Hartmann, A., Gillis, M., and Döbereiner, J. 1996. Emended descriptions of Herbaspirillum; inclusion of [Pseudomonas] rubisualbicans, a mild pathogen, as Herbaspirillum rubisualbicans comb, nov.; and classification of a group of clinical isolates (EF group 1) as Herbaspirillum species 3. Int. J. Syst. Bacteriol. 46: 802-810.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , pp. 802-810
    • Baldani, J.I.1    Pot, B.2    Kirchhof, G.3    Falsen, E.4    Baldani, V.L.D.5    Olivares, F.L.6    Hoste, B.7    Kersters, K.8    Hartmann, A.9    Gillis, M.10    Döbereiner, J.11
  • 4
    • 0029659523 scopus 로고    scopus 로고
    • Root colonization of maize and lettuce by bioluminescent Rhizobium leguminosarum biovar phaseoli
    • Chabot, R., Antoun, H., Kloepper, J.W., and Beauchamp, C.J. 1996. Root colonization of maize and lettuce by bioluminescent Rhizobium leguminosarum biovar phaseoli. Appl. Environ. Microbiol. 62: 2767-2772.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2767-2772
    • Chabot, R.1    Antoun, H.2    Kloepper, J.W.3    Beauchamp, C.J.4
  • 5
    • 0033953105 scopus 로고    scopus 로고
    • Immunolocalization of dinitrogenase reductase produced by Klebsiella pneumoniae in association with Zea mays L.
    • Chelius, M.K., and Triplett, E.W. 2000. Immunolocalization of dinitrogenase reductase produced by Klebsiella pneumoniae in association with Zea mays L. Appl. Environ. Microbiol. 66: 783-787.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 783-787
    • Chelius, M.K.1    Triplett, E.W.2
  • 6
    • 0034964968 scopus 로고    scopus 로고
    • The diversity of archaea and bacteria in association with the roots of Zea mays L.
    • Chelius, M.K., and Triplett, E.W. 2001. The diversity of archaea and bacteria in association with the roots of Zea mays L. Microb. Ecol. 41: 252-263.
    • (2001) Microb. Ecol. , vol.41 , pp. 252-263
    • Chelius, M.K.1    Triplett, E.W.2
  • 7
    • 0024297354 scopus 로고
    • Multiple sequence alignment with hierarchical clustering
    • Corpet, F. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16: 10 881-10 890.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 10881-10890
    • Corpet, F.1
  • 8
    • 0035346929 scopus 로고    scopus 로고
    • 16S ribosomal DNA characterization of nitrogen-fixing bacteria isolated from banana (Musa spp.) and pineapple (Ananas comosus (L.) Merril)
    • Cruz, L.M., De Souza, E.M., Weber, O.B., Baldani, J.I., Döbereiner, J., and De Oliveira Pedrosa, F. 2001. 16S ribosomal DNA characterization of nitrogen-fixing bacteria isolated from banana (Musa spp.) and pineapple (Ananas comosus (L.) Merril). Appl. Environ. Microbiol. 67: 2375-2379.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 2375-2379
    • Cruz, L.M.1    De Souza, E.M.2    Weber, O.B.3    Baldani, J.I.4    Döbereiner, J.5    De Oliveira Pedrosa, F.6
  • 9
    • 0037249134 scopus 로고    scopus 로고
    • Plant growth-promoting effects of diazotrophs in the rhizosphere
    • Dobbelaere, S., Vanderleyden, J., and Okon, Y. 2003. Plant growth-promoting effects of diazotrophs in the rhizosphere. Crit. Rev. Plant Sci. 22: 107-149.
    • (2003) Crit. Rev. Plant Sci. , vol.22 , pp. 107-149
    • Dobbelaere, S.1    Vanderleyden, J.2    Okon, Y.3
  • 10
    • 0032798572 scopus 로고    scopus 로고
    • Endophytic expression of nif genes of Azoarcus sp. strain BH72 in rice roots
    • Egener, T., Hurek, T., and Reinhold-Hurek, B. 1999. Endophytic expression of nif genes of Azoarcus sp. strain BH72 in rice roots. Mol. Plant-Microbe Interact. 12: 813-819.
    • (1999) Mol. Plant-Microbe Interact. , vol.12 , pp. 813-819
    • Egener, T.1    Hurek, T.2    Reinhold-Hurek, B.3
  • 12
    • 0027087962 scopus 로고
    • The distribution of some fungal and bacterial endophytes in maize (Zea mays L.)
    • Fisher, P.J., Petrini, O., and Scott, H.M.L. 1992. The distribution of some fungal and bacterial endophytes in maize (Zea mays L.). New Phytol. 12: 299-305.
    • (1992) New Phytol. , vol.12 , pp. 299-305
    • Fisher, P.J.1    Petrini, O.2    Scott, H.M.L.3
  • 13
    • 0034968080 scopus 로고    scopus 로고
    • Analysis of endophytic bacterial communities of potato by plating and denaturating gradient gel electrophoresis (DGGE) of 16S rDNA based PCR fragments
    • Garbeva, P., van Overbeek, L.S., van Vuurde, J.W.L., and van Elsas, J.D. 2001. Analysis of endophytic bacterial communities of potato by plating and denaturating gradient gel electrophoresis (DGGE) of 16S rDNA based PCR fragments. Microb. Ecol. 41: 369-383.
    • (2001) Microb. Ecol. , vol.41 , pp. 369-383
    • Garbeva, P.1    Van Overbeek, L.S.2    Van Vuurde, J.W.L.3    Van Elsas, J.D.4
  • 14
    • 0035807450 scopus 로고    scopus 로고
    • Natural endophytic association between Rhizobium etli and maize (Zea mays L.)
    • Gutiérrez-Zamora, M.L., and Martínez-Romero, E. 2001. Natural endophytic association between Rhizobium etli and maize (Zea mays L.). J. Biotechnol. 91: 117-126.
    • (2001) J. Biotechnol. , vol.91 , pp. 117-126
    • Gutiérrez-Zamora, M.L.1    Martínez-Romero, E.2
  • 16
    • 0141560241 scopus 로고
    • Sweetpotato root and biomass production with and without nitrogen fertilization
    • Hill, W.A., Dodo, H., Hahn, S.K., Mulongoy, K., and Adeyeye, S.O. 1990. Sweetpotato root and biomass production with and without nitrogen fertilization. Agron. J. 82: 1120-1122.
    • (1990) Agron. J. , vol.82 , pp. 1120-1122
    • Hill, W.A.1    Dodo, H.2    Hahn, S.K.3    Mulongoy, K.4    Adeyeye, S.O.5
  • 17
    • 0029141074 scopus 로고
    • Rhizosphere colonization of different crops with growth promoting Pseudomonas and Rhizobium bacteria
    • Höflich, G., Wiehe, W., and Hecht-Buchholz, C. 1995. Rhizosphere colonization of different crops with growth promoting Pseudomonas and Rhizobium bacteria. Microbiol. Res. 150: 139-147.
    • (1995) Microbiol. Res. , vol.150 , pp. 139-147
    • Höflich, G.1    Wiehe, W.2    Hecht-Buchholz, C.3
  • 18
    • 0035987085 scopus 로고    scopus 로고
    • Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state
    • Hurek, T., Handley, L.L., Reinhold-Hurek, B., and Piché, Y. 2002. Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state. Mol. Plant-Microbe Interact. 15: 233-242.
    • (2002) Mol. Plant-Microbe Interact. , vol.15 , pp. 233-242
    • Hurek, T.1    Handley, L.L.2    Reinhold-Hurek, B.3    Piché, Y.4
  • 19
    • 0028080550 scopus 로고
    • Infection of sugar cane by the nitrogen-fixing bacterium Acetobacter diazotrophicus
    • James, E.K., Reis, V.M., Olivares, F.L., Baldani, J.I., and Döbereiner, J. 1994. Infection of sugar cane by the nitrogen-fixing bacterium Acetobacter diazotrophicus. J. Exp. Bot. 45: 757-766.
    • (1994) J. Exp. Bot. , vol.45 , pp. 757-766
    • James, E.K.1    Reis, V.M.2    Olivares, F.L.3    Baldani, J.I.4    Döbereiner, J.5
  • 21
    • 0025822640 scopus 로고
    • Amplification, cloning, and sequencing of a nifh segment from aquatic microorganisms and natural communities
    • Kirshtein, J.D., Pearl, H.W., and Zehr, J.P. 1991. Amplification, cloning, and sequencing of a nifh segment from aquatic microorganisms and natural communities. Appl. Environ. Microbiol. 57: 2645-2650.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 2645-2650
    • Kirshtein, J.D.1    Pearl, H.W.2    Zehr, J.P.3
  • 22
    • 0030714988 scopus 로고    scopus 로고
    • Introduction: Assessing opportunities for nitrogen fixation in rice - A frontier project
    • Lahda, J.K., De Bruijn, F.J., and Malik, K.A. 1997. Introduction: assessing opportunities for nitrogen fixation in rice - a frontier project. Plant Soil, 194: 1-10.
    • (1997) Plant Soil , vol.194 , pp. 1-10
    • Lahda, J.K.1    De Bruijn, F.J.2    Malik, K.A.3
  • 23
    • 0035516087 scopus 로고    scopus 로고
    • Recovery and phylogenetic analysis of nifH sequences from diazotrophic bacteria associated with dead aboveground biomass of Spartina alterniflora
    • Lovell, C.R., Friez, M.J., Longshore, J.W., and Bagwell, C.E. 2001. Recovery and phylogenetic analysis of nifH sequences from diazotrophic bacteria associated with dead aboveground biomass of Spartina alterniflora. Appl. Environ. Microbiol. 67: 5308-5314.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 5308-5314
    • Lovell, C.R.1    Friez, M.J.2    Longshore, J.W.3    Bagwell, C.E.4
  • 24
    • 0028978068 scopus 로고
    • Survey of indigenous bacterial endophytes from cotton and sweet corn
    • McInroy, J.A., and Kloepper, J.W. 1995. Survey of indigenous bacterial endophytes from cotton and sweet corn. Plant Soil, 173: 337-342.
    • (1995) Plant Soil , vol.173 , pp. 337-342
    • McInroy, J.A.1    Kloepper, J.W.2
  • 25
    • 0029662423 scopus 로고    scopus 로고
    • Rhizobium leguminosarum as a plant growth-promoting rhizobacterium: Direct growth promotion of canola and lettuce
    • Noel, T.C., Sheng, C., Yost, C.K., Pharis, R.P., and Hynes, M.F. 1996. Rhizobium leguminosarum as a plant growth-promoting rhizobacterium: direct growth promotion of canola and lettuce. Can. J. Microbiol. 42: 279-283.
    • (1996) Can. J. Microbiol. , vol.42 , pp. 279-283
    • Noel, T.C.1    Sheng, C.2    Yost, C.K.3    Pharis, R.P.4    Hynes, M.F.5
  • 26
    • 0029765445 scopus 로고    scopus 로고
    • Diversity of nitrogen fixation genes in the symbiotic intestinal microflora of the termite Reticulitermes speratus
    • Ohkuma, M., Noda, S., Usami, R., Horikoshi, K., and Kudo, T. 1996. Diversity of nitrogen fixation genes in the symbiotic intestinal microflora of the termite Reticulitermes speratus. Appl. Environ. Microbiol. 62: 2747-2752.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2747-2752
    • Ohkuma, M.1    Noda, S.2    Usami, R.3    Horikoshi, K.4    Kudo, T.5
  • 27
    • 0030476362 scopus 로고    scopus 로고
    • Isolation and characterization of endophytic diazotrophs from Zea mays L. and Zea luxurians Iltis and Doebley
    • Palus, J.A., Borneman, J., Ludden, P.W., and Triplett, E.W. 1996. Isolation and characterization of endophytic diazotrophs from Zea mays L. and Zea luxurians Iltis and Doebley. Plant Soil, 186: 135-142.
    • (1996) Plant Soil , vol.186 , pp. 135-142
    • Palus, J.A.1    Borneman, J.2    Ludden, P.W.3    Triplett, E.W.4
  • 28
    • 0026288249 scopus 로고
    • Interactions of Golum clarum with Acetobacter diazothrophicus in infection of sweet potato (Ipomoea batatas), sugarcane (Saccharum spp.), and sweet sorghum (Sorghum vulgare)
    • Paula, M.A., Reis, V.M., and Döbereiner, J. 1991. Interactions of Golum clarum with Acetobacter diazothrophicus in infection of sweet potato (Ipomoea batatas), sugarcane (Saccharum spp.), and sweet sorghum (Sorghum vulgare). Biol. Fertil. Soils, 11: 111-115.
    • (1991) Biol. Fertil. Soils , vol.11 , pp. 111-115
    • Paula, M.A.1    Reis, V.M.2    Döbereiner, J.3
  • 29
    • 0033118313 scopus 로고    scopus 로고
    • Rhizobium sp. strain NGR234 and R. fredii USDA257 share exceptionally broad, nested host ranges
    • Pueppke, S.G., and Broughton W.J. 1999. Rhizobium sp. strain NGR234 and R. fredii USDA257 share exceptionally broad, nested host ranges. Mol. Plant-Microbe Interact. 12: 293-318.
    • (1999) Mol. Plant-Microbe Interact. , vol.12 , pp. 293-318
    • Pueppke, S.G.1    Broughton, W.J.2
  • 30
    • 0001316539 scopus 로고
    • Close association of Azospirillum and diazotrophic rods with different zones of Kallar grass
    • Reinhold, B., Hurek, T., Niemann, E.-G., and Fendrik, I. 1986. Close association of Azospirillum and diazotrophic rods with different zones of Kallar grass. Appl. Environ. Microbiol. 52: 520-526.
    • (1986) Appl. Environ. Microbiol. , vol.52 , pp. 520-526
    • Reinhold, B.1    Hurek, T.2    Niemann, E.-G.3    Fendrik, I.4
  • 31
    • 0031902731 scopus 로고    scopus 로고
    • Interactions of gramineous plants with Azoarcus spp., and other diazotrophs: Identification, localization and perspectives to study their function
    • Reinhold-Hurek, B., and Hurek, T. 1998. Interactions of gramineous plants with Azoarcus spp., and other diazotrophs: identification, localization and perspectives to study their function. Crit. Rev. Plant Sci. 17: 29-54.
    • (1998) Crit. Rev. Plant Sci. , vol.17 , pp. 29-54
    • Reinhold-Hurek, B.1    Hurek, T.2
  • 32
    • 0027169610 scopus 로고
    • Azoarcus gen. nov., nitrogen-fixing proteobacteria associated with roots of Kallar grass (Leptochloa fusca (L.) Kunth), and description of two species, Azoarcus indigens sp. nov., and Azoarcus communis sp. nov.
    • Reinhold-Hurek, B., Hurek, T., Gillis, M., Hoste, B., Vancanneyt, M., Kersters, K., and De Ley, J. 1993. Azoarcus gen. nov., nitrogen-fixing proteobacteria associated with roots of Kallar grass (Leptochloa fusca (L.) Kunth), and description of two species, Azoarcus indigens sp. nov., and Azoarcus communis sp. nov. Int. J. Syst. Bacteriol. 43: 574-584.
    • (1993) Int. J. Syst. Bacteriol. , vol.43 , pp. 574-584
    • Reinhold-Hurek, B.1    Hurek, T.2    Gillis, M.3    Hoste, B.4    Vancanneyt, M.5    Kersters, K.6    De Ley, J.7
  • 34
    • 0036245014 scopus 로고    scopus 로고
    • Response of endophytic bacterial communities in potato plants to infection with Erwinia carotovora subsp. atrospetica
    • Reiter, B., Pfeifer, U., Schwab, H., and Sessitsch, A. 2002. Response of endophytic bacterial communities in potato plants to infection with Erwinia carotovora subsp. atrospetica. Appl. Environ. Microbiol. 68: 2261-2268.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2261-2268
    • Reiter, B.1    Pfeifer, U.2    Schwab, H.3    Sessitsch, A.4
  • 36
    • 0001674207 scopus 로고
    • Bacillus azotofixans sp. nov., a nitrogen-fixing species from Brazilian soils and grass roots
    • Seldin, L., Van Elsas, J.D., and Penido, E.G.C. 1984. Bacillus azotofixans sp. nov., a nitrogen-fixing species from Brazilian soils and grass roots. Int. J. Syst. Bacteriol. 34: 451-456.
    • (1984) Int. J. Syst. Bacteriol. , vol.34 , pp. 451-456
    • Seldin, L.1    Van Elsas, J.D.2    Penido, E.G.C.3
  • 37
    • 0344015774 scopus 로고    scopus 로고
    • Comparison of Paenibacillus azotofixans strains isolated from rhizoplane, rhizosphere, and non-root-associated soil from maize planted in two different Brazilian soils
    • Seldin, L., Rosado, A.S., da Cruz, D.W., Nobrega, A., van Elsas, J.D., and Paiva, E. 1998. Comparison of Paenibacillus azotofixans strains isolated from rhizoplane, rhizosphere, and non-root-associated soil from maize planted in two different Brazilian soils. Appl. Environ. Microbiol. 64: 3860-3868.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3860-3868
    • Seldin, L.1    Rosado, A.S.2    Da Cruz, D.W.3    Nobrega, A.4    Van Elsas, J.D.5    Paiva, E.6
  • 38
    • 0036191156 scopus 로고    scopus 로고
    • Cultivation-independent population analysis of bacterial endophytes in three potato varieties based on eubacterial and Actinomycetes-specific PCR of 16S rRNA genes
    • Sessitsch, A., Reiter, B., Pfeifer, U., and Wilhelm, E. 2002a. Cultivation-independent population analysis of bacterial endophytes in three potato varieties based on eubacterial and Actinomycetes-specific PCR of 16S rRNA genes. FEMS Microbiol. Ecol. 39: 23-32.
    • (2002) FEMS Microbiol. Ecol. , vol.39 , pp. 23-32
    • Sessitsch, A.1    Reiter, B.2    Pfeifer, U.3    Wilhelm, E.4
  • 40
    • 85047680365 scopus 로고    scopus 로고
    • Associations of bacterial endophyte populations from red clover and potato crops with potential for beneficial allelopathy
    • Sturz, A.V., Christie, B.R., and Matheson, B.G. 1998. Associations of bacterial endophyte populations from red clover and potato crops with potential for beneficial allelopathy. Can. J. Microbiol. 44: 162-167.
    • (1998) Can. J. Microbiol. , vol.44 , pp. 162-167
    • Sturz, A.V.1    Christie, B.R.2    Matheson, B.G.3
  • 42
    • 0028987145 scopus 로고
    • 2-fixing bacterial diversity detected in rice roots by molecular evolutionary analysis of nifH gene sequences
    • 2-fixing bacterial diversity detected in rice roots by molecular evolutionary analysis of nifH gene sequences. J. Bacteriol. 177: 1414-1417.
    • (1995) J. Bacteriol. , vol.177 , pp. 1414-1417
    • Ueda, T.1    Suga, Y.2    Yahiro, N.3    Matsuguchi, T.4
  • 43
    • 0026679994 scopus 로고
    • Contribution of nitrogen fixation to sugar cane: Nitrogen-15 and nitrogen balance estimates
    • Urquiaga, S., Cruz, K.H.S., and Boddey, R.M. 1992. Contribution of nitrogen fixation to sugar cane: nitrogen-15 and nitrogen balance estimates. Soil Sci. Soc. Am. J. 56: 105-114.
    • (1992) Soil Sci. Soc. Am. J. , vol.56 , pp. 105-114
    • Urquiaga, S.1    Cruz, K.H.S.2    Boddey, R.M.3
  • 44
    • 0028509254 scopus 로고
    • TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • Van de Peer, Y., and de Wachter, R. 1994. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput. Appl. Biosci. 10: 569-570.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 569-570
    • Van De Peer, Y.1    De Wachter, R.2
  • 45
    • 0033083698 scopus 로고    scopus 로고
    • Analysis of nifh gene pool complexity in soil and litter at a Douglas fir forest site in Oregon Cascade Mountain Range
    • Widmer, F., Schaffer, B.T., Porteous, L.A., and Seidler, R.J. 1999. Analysis of nifh gene pool complexity in soil and litter at a Douglas fir forest site in Oregon Cascade Mountain Range. Appl. Environ. Microbiol. 65: 374-380.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 374-380
    • Widmer, F.1    Schaffer, B.T.2    Porteous, L.A.3    Seidler, R.J.4
  • 49
    • 0001975986 scopus 로고
    • Phylogenetic classification of nitrogen-fixing organisms
    • Edited by G. Stacy, R.H. Burris, and H.J. Evans. Chapman and Hall Inc., New York
    • Young, J.P.W. 1992. Phylogenetic classification of nitrogen-fixing organisms. In Biological nitrogen fixation. Edited by G. Stacy, R.H. Burris, and H.J. Evans. Chapman and Hall Inc., New York, pp. 43-86.
    • (1992) Biological Nitrogen Fixation , pp. 43-86
    • Young, J.P.W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.