The "patholog" of the gene expression profile in evaluating the ecotoxins effects

Advances in Ecological Sciences

Volumn 10, Issue , 2001, Pages 733-742

  Iacobs A D ^a,b   Urban, M ^b   Iacobas S ^a   Spray, D C ^b  

^a OVIDIUS UNIVERSITY   (Romania)

^b ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BOUNDARY VALUE PROBLEMS; DATA ACQUISITION; DATA REDUCTION; DNA SEQUENCES; ECOLOGY; ECOSYSTEMS; GENES; MATHEMATICAL MODELS; NUTRITION; OPTIMIZATION; PATHOLOGY;

GENE EXPRESSIONS; GENETIC DISEASES; GENETIC EVOLUTION; NUTRITION DEFICIENCY;

GENETIC ENGINEERING;

EID: 0347820069     PISSN: 13698273     EISSN: None     Source Type: Book Series    
DOI: None     Document Type: Conference Paper

References (37)

1. Brown P.O., Botstein D. Exploring the new world of the genome with DNA microarrays. Nature genetics supplement. 21: 33-37, 1999.
2. Cheung V.G. Morley M., Aguilar F., Massimi A., Kucherlapati R., Childs G. Making and reading microarrays. Nature Genetics 21 (1 Suppl): 15-19, 1999.
3. Eisen M.B., Brown P.O. DNA arrays of gene expression. Methods in Enzymology, 303: 179-205, 1999.
4. Evertsz E., Starink P., Gupta R., Watson D. Technology and applications of gene expression microarrays. In Microarray Biochip Technology, ED. M.Schena, Eaton Publishing. Natick, MA. pp. 149-166, 2000.
5. Audic S., Claverie J.M. The significance of digital gene expression profiles. Genome Res. 7(10), 986-995, 1998.
6. Iacobaş A.D., Iacobaş S. Noi concepte şi indicatori în terapia geneticǎ. Analele Universitǎţii Ovidius. Seria Ştiinţe medicale. 7, 41-47, 2001.
7. Tavazoie S., Hughes J.D., Campbell M.J., Cho R.J., Church G.M. Systematic determination of genetic network architecture. Nature genetics. 22: 281-285, 1999.
8. Iacobaş A.D., Iacobaş S. Noi indicatori farmacologici în terapia geneticǎ. Farmacia 1, 2001 (to appear).
9. Iacobaş A.D., Urban M., Iacobaş S., Spray D.C. Premizele unei clasificǎri farmacologice pe baza pattern-urilor profilelor de exprimare a genelor individuate. Farmacia. 1. 2001 (to appear)
10. Scherf U., Ross D.T., Waltham M., Smith L.H., Lee J.K., Tanabe L., Kohn K.W., Reinhold W.C., Myers T.G., Andrews D.T., Scudiero D.A., Eisen M.B., Sausville E.A., Pommier Y., Botstein D., Brown P.O. A gene expression database for the molecular pharmacology of cancer. Nature genetics, 24:236-244, 2000.
11. Bittner M., Meltzer P., Trent J. Data analysis and integration: of steps and arrows. Nature genetcs. 22: 213-215, 1999.
12. Gaasterland T., Bekiranov S. Making the most of microarray data. Nature Genetics, 24: 204-206, 2000.
13. Iacobaş A.D., Urban M., Iacobaş S., Spray D.C. Bazele matematice şi conceptuale ale analizei pattern-urilor profilelor de exprimare ale genelor individuale. Analele Universitǎţii Ovidius. Seria Ştiinţe medicale. 1, 48-52, 2001.
14. Bassett Jr. D.E., Eisen M.B., Boguski M.S.. Gene expression informatics - it's all in your mine. Nature genetics. Supplement. 21: 51-55.
15. Smolen P., Baxter D.A., Byrne J.H. Modeling transcriptional control in gene networks - methods, recent results, and future directions. Bull. Math. Biol. 62, 247-292, 2000.
16. Spray D.C., Iacobaş A.D., Urban M. Theoretical and practical optimization of gene microarray technique. Medinf'2000. (www.umfiasi.ro/medinf)
17. Basarsky T., Verdnik D., Zhai J.Y., Wellis D. Overview of a microarray scanner: design essentials for an integrated acquisition and analysis platform. Microarray Biochip Technology, ed. M.Schena, Eaton Publishing. Natick, MA. pp.265-284, 1999.
18. Carulli J.P., Artinger M., Swain P.M., Root C.D., Chee L., Tulig C., Guerin J., Osborne M., Stein G., Lian J., Lomedico P.T.. High throughput analysis of differential gene expression. J. Cell. Biochem. Suppl. 30/31: 286-296, 1998.
19. Iacobaş A.D., Urban M., Spray D.C. New protocol in spotting microarray technique. Rom. J. Physiology 1-2, 2000. (to appear in 2001)
20. Ross D.T., Eisen M.B., Perou C.M., Rees C., Spellman P., Iyer V., Jeffrey S.S., Rijn Mvd, Waltham M., Pergamenschikov A., Lee J.C.F., Lashkari D., Shalon D., Myers T.G., Weinstein J.N., Botstein D., Brown P.O. Systematic variation in gene expression patterns in human cancer cell lines. Nature genetics. 24: 227-235, 2000.
21. Tortonen P., Kolehmainen M., Wong G., Carsten E. Analysis of gene expression data using self-organizing maps. FEBS Letters, 451: 142-146, 1999.
22. Iacobaş S., Iacobaş A.D. Functions with medical meaning defined on a pre-Hilbert space of normal and pathological states of the human organism. Actual Problems in Biophysics. 7, 205-208, 1983.
23. Iacobaş S., Iacobaş A.D. A mathematical transcription of a current problem in physiology. PHYSIOLOGIE, 24(4), 267-270, 1987.
24. Iacobaş A.D., Iacobaş S, Spray D.C. The "patholog" of the genes expression profile, a new tool in defining, evaluating, and classifying the genetic diseases. Rom. J. Physiology 1-2, 2000. (to appear in 2001)
25. Iacobaş A.D., Urban M., Iacobaş S., Spray D.C. The "patholog" of the genes expression profile in stable transfected mouse N2A cells with C×36 and C×50. Ars Medica Tomitana. VII(25) (in press)
26. Iacobaş A.D. Cancer classification by analyzing the patterns in the pre-Hilbert space of gene expression. MEDINF'2000 (www.umfiasi.ro/medinf). 2001.
27. Iacobaş A.D., Iacobaş S. Mathematical set up of an actual medical problem. Analele Universitatii "Ovidius" Constanţa. Seria Ştiinţe medicale. II, 152-160, 1991.
28. Rozental R, Srinivas M., Gokhan S., Urban M., Dermitzel R., Kessler J.A., Spray D.C., Meltzer M.F. Temporal expression of neuronal connexins during hippocampal ontogeny. Brain Res. Rev. 32: 57-71, 2000.
29. Iacobaş A.D., Iacobaş S. Evaluation and validation of the health care system by the Theory of pathologic. (Chapter 47) Advances in Medical Physics, Biophysics and Biomaterials. Ed. E. Kukurova, Male Centrum, Bratislava, pp. 175-179, 1997.
30. Iacobaş A.D., Iacobaş S. Drug efficiency estimate with the Theory of Pathologic. MEDINF'98. 80-85, 1998. http://medinfo.umft.ro/rsmi.
31. Iacobaş A.D. New ideas in thermodynamical ecology. Ecology of industrial regions. 2(1-2), 96-100, 1996.
32. Iacobaş Sanda, A.D.Iacobaş. Principles of ecological reconstruction. Ecology of industrial regions. 2(1-2), 101-106, 1996.
33. Iacobaş A.D., Iacobaş S. Algoritm pentru optimizarea pe computer a tratamentelor medicale. (Chapter 14) Cibernetica aplicatǎ. ed. M.Manescu. pp. 117-122, 1985.
34. Iacobaş A.D., Iacobaş S. BASIC program in monitoring and analysing of a living system. PHYSIOLOGIE. 24(4), 267-270, 1987.
35. Iacobaş S., Iacobaş A.D. Le pathologique - synthèse des informations sur 1'organisme humain. (Chapter 12) Aspects energetiques et informationels dans les systemes vivants, ed. M. Godeanu. ICEBIOL, Bucharest, pp. 127-134, 1986.
36. rd English edition Bucura Mond, Bucharest, pp. 1-33, 85-89, 1997.
37. th English edition, Tilia Press International, Constanţa, pp. 273-300, 2000.