GRIL: Genome rearrangement and inversion locator

Bioinformatics

Volumn 20, Issue 1, 2004, Pages 122-124

  Darling, Aaron E ^a   Mau, Bob ^b   Blattner, Frederick R ^b   Perna, Nicole ^b  

^a University of Wisconsin Madison   (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BACTERIAL GENOME; COMPUTER PROGRAM; GENE REARRANGEMENT; GENE SEQUENCE; GENOME ANALYSIS; GENOME SIZE; PHYLOGENY; PRIORITY JOURNAL; PROCESS DESIGN; SEQUENCE ALIGNMENT;

DNA MUTATIONAL ANALYSIS; GENE EXPRESSION PROFILING; GENE REARRANGEMENT; GENOME, BACTERIAL; INVERSION, CHROMOSOME; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SOFTWARE;

BACTERIA (MICROORGANISMS);

EID: 0347724102     PISSN: 13674803     EISSN: None     Source Type: Journal    
DOI: 10.1093/bioinformatics/btg378     Document Type: Article

References (8)

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2. Bourque,G. and Pevzner,P.A. (2002) 'Genome-scale evolution: reconstructing gene orders in the ancestral species.' Genome Res., 12, 26-36.
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4. Delcher,A.L., Kasif,S., Fleischmann, R.D., Peterson, J., White, O. and Salzberg,S.L. (1999) 'Alignment of whole genomes.' Nucleic Acids Res., 27, 2369-2376.
5. Hohl,M., Kurtz,S. and Ohlebusch,E. (2002) 'Efficient multiple genome alignment.' Bioinformatics, 18 (Suppl. 1), S312-S320.
6. Larget,B., Simon,D. and Kadane,J. (2002) 'Bayesian phylogenetic inference from animal mitrochrondrial genomes.' J. R. Stat. Soc. Ser. B, 64, 681-693.
7. Moret,B.M., Wang,L.S., Warnow, T. and Wyman,S.K. (2001) 'New approaches for reconstructing phylogenies from gene order data.' Bioinformatics, 17 (Suppl. 1), S165-S173.
8. Pevzner,P. and Tesler,G. (2003) 'Genome rearrangements in Mammalian evolution: lessons from human and mouse genomes.' Genome Res., 13, 37-45.