-
1
-
-
0032557677
-
Monitoring the Gcn4 protein-mediated response in the yeast Saccharomyces cerevisiae
-
Albrecht,G., Mosch,H.U., Hoffmann,B., Reusser,U. and Braus,G.H. (1998) Monitoring the Gcn4 protein-mediated response in the yeast Saccharomyces cerevisiae. J. Biol. Chem., 273, 12696-12702.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 12696-12702
-
-
Albrecht, G.1
Mosch, H.U.2
Hoffmann, B.3
Reusser, U.4
Braus, G.H.5
-
2
-
-
0032413411
-
Predicting gene regulatory elements in silico on a genomic scale
-
Brazma,A., Jonassen,I., Vilo,J. and Ukkonen,E. (1998) Predicting gene regulatory elements in silico on a genomic scale. Genome Res., 8, 1202-1215.
-
(1998)
Genome Res.
, vol.8
, pp. 1202-1215
-
-
Brazma, A.1
Jonassen, I.2
Vilo, J.3
Ukkonen, E.4
-
3
-
-
0035135420
-
Regulatory element detection using correlation with expression
-
Bussemaker,H.J., Li,H. and Siggia,E.D. (2001) Regulatory element detection using correlation with expression. Nature Genet., 27, 167-171.
-
(2001)
Nature Genet.
, vol.27
, pp. 167-171
-
-
Bussemaker, H.J.1
Li, H.2
Siggia, E.D.3
-
4
-
-
0034747024
-
YPD PombePD and WormPD: Model organism volumes of the BioKnowledge library, an integrated resource for protein information
-
Costanzo,M.C., Crawford,M.E., Hirschman,J.E., Kranz,J.E., Olsen,P., Robertson,L.S., Skrzypek,M.S., Braun,B.R., Hopkins,K.L., Kondu,P., Lengieza,C., Lew-Smith,J.E., Tillberg,M. and Garrels,J.I. (2001) YPD PombePD and WormPD: model organism volumes of the BioKnowledge library, an integrated resource for protein information. Nucleic Acids Res., 29, 75-79.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 75-79
-
-
Costanzo, M.C.1
Crawford, M.E.2
Hirschman, J.E.3
Kranz, J.E.4
Olsen, P.5
Robertson, L.S.6
Skrzypek, M.S.7
Braun, B.R.8
Hopkins, K.L.9
Kondu, P.10
Lengieza, C.11
Lew-Smith, J.E.12
Tillberg, M.13
Garrels, J.I.14
-
5
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen,M.B., Spellman,P.T., Brown,P.O. and Botstein,D. (1998) Cluster analysis and display of genome-wide expression patterns. Proc. Natl Acad. Sci. USA, 95, 14863-14868.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
6
-
-
0025133327
-
The 31-kDa polypeptide is an essential subunit of the vacuolar ATPase in Saccharomyces cerevisiae
-
Foury,F. (1990) The 31-kDa polypeptide is an essential subunit of the vacuolar ATPase in Saccharomyces cerevisiae. J. Biol. Chem., 265, 18554-18560.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 18554-18560
-
-
Foury, F.1
-
7
-
-
0035733690
-
Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae
-
Ge,H., Liu,Z., Church,G.M. and Vidal,M. (2001) Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae. Nature Genet., 29, 482-486.
-
(2001)
Nature Genet.
, vol.29
, pp. 482-486
-
-
Ge, H.1
Liu, Z.2
Church, G.M.3
Vidal, M.4
-
8
-
-
0009407476
-
Evidence for translational regulation of the activator of general amino acid control in yeast
-
Hinnebusch,A.G. (1984) Evidence for translational regulation of the activator of general amino acid control in yeast. Proc. Natl Acad. Sci. USA, 81, 6442-6446.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 6442-6446
-
-
Hinnebusch, A.G.1
-
9
-
-
0002294347
-
A simple sequentially rejective multiple test procedure
-
Holm,S. (1979) A simple sequentially rejective multiple test procedure. Scandinavian J. Statistics, 6, 65-70.
-
(1979)
Scandinavian J. Statistics
, vol.6
, pp. 65-70
-
-
Holm, S.1
-
10
-
-
0034616930
-
Functional discovery via a compendium of expression profiles
-
Hughes,T.R., Marton,M.J., Jones,A.R., Roberts,C.J., Stoughton,R., Armour,C.D., Bennett,H.A., Coffey,E., Dai,H., He,Y.D., Kidd,M.J., King,A.M., Meyer,M.R., Slade,D., Lum,P.Y., Stepaniants,S.B., Shoemaker,D.D., Gachotte,D., Chakraburtty,K., Simon,J., Bard,M. and Friend,S.H. (2000) Functional discovery via a compendium of expression profiles. Cell, 102, 109-126.
-
(2000)
Cell
, vol.102
, pp. 109-126
-
-
Hughes, T.R.1
Marton, M.J.2
Jones, A.R.3
Roberts, C.J.4
Stoughton, R.5
Armour, C.D.6
Bennett, H.A.7
Coffey, E.8
Dai, H.9
He, Y.D.10
Kidd, M.J.11
King, A.M.12
Meyer, M.R.13
Slade, D.14
Lum, P.Y.15
Stepaniants, S.B.16
Shoemaker, D.D.17
Gachotte, D.18
Chakraburtty, K.19
Simon, J.20
Bard, M.21
Friend, S.H.22
more..
-
11
-
-
0035805255
-
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
-
Ideker,T., Thorsson,V., Ranish,J.A., Christmas,R., Buhler,J., Eng,J.K., Bumgarner,R., Goodlett,D.R., Aebersold,R. and Hood,L. (2001) Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science, 292, 929-934.
-
(2001)
Science
, vol.292
, pp. 929-934
-
-
Ideker, T.1
Thorsson, V.2
Ranish, J.A.3
Christmas, R.4
Buhler, J.5
Eng, J.K.6
Bumgarner, R.7
Goodlett, D.R.8
Aebersold, R.9
Hood, L.10
-
12
-
-
0035156258
-
Assessing clusters and motifs from gene expression data
-
Jakt,L.M., Cao,L., Cheah,K.S. and Smith,D.K. (2001) Assessing clusters and motifs from gene expression data. Genome Res., 11, 112-123.
-
(2001)
Genome Res.
, vol.11
, pp. 112-123
-
-
Jakt, L.M.1
Cao, L.2
Cheah, K.S.3
Smith, D.K.4
-
13
-
-
0036081347
-
MIPS: A database for genomes and protein sequences
-
Mewes,H.W., Frishman,D., Guldener,U., Mannhaupt,G., Mayer,K., Mokrejs,M., Morgenstern,B., Munsterkotter,M., Rudd,S. and Weil,B. (2002) MIPS: a database for genomes and protein sequences. Nucleic Acids Res., 30, 31-34.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 31-34
-
-
Mewes, H.W.1
Frishman, D.2
Guldener, U.3
Mannhaupt, G.4
Mayer, K.5
Mokrejs, M.6
Morgenstern, B.7
Munsterkotter, M.8
Rudd, S.9
Weil, B.10
-
14
-
-
0034785443
-
Identifying regulatory networks by combinatorial analysis of promoter elements
-
Pilpel,Y., Sudarsanam,P. and Church,G.M. (2001) Identifying regulatory networks by combinatorial analysis of promoter elements. Nature Genet., 29, 153-159.
-
(2001)
Nature Genet.
, vol.29
, pp. 153-159
-
-
Pilpel, Y.1
Sudarsanam, P.2
Church, G.M.3
-
15
-
-
0031787969
-
Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation
-
Roth,F.P., Hughes,J.D., Estep,P.W. and Church,G.M. (1998) Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation. Nat. Biotechnol., 16, 939-945.
-
(1998)
Nat. Biotechnol.
, vol.16
, pp. 939-945
-
-
Roth, F.P.1
Hughes, J.D.2
Estep, P.W.3
Church, G.M.4
-
16
-
-
0345928693
-
-
In these proceedings, Oxford University Press
-
Rung,J., Schlitt,T., Brazma,A., Freivalds,K. and Vilo,J. (2002) Building and Analysing Genome-Wide Gene Disruption Networks, In these proceedings, Oxford University Press.
-
(2002)
Building and Analysing Genome-Wide Gene Disruption Networks
-
-
Rung, J.1
Schlitt, T.2
Brazma, A.3
Freivalds, K.4
Vilo, J.5
-
17
-
-
0034737325
-
Highly specific localization of promoter regions in large genomic sequences by PromoterInspector: A novel context analysis approach
-
Scherf,M., Klingenhoff,A. and Werner,T. (2000) Highly specific localization of promoter regions in large genomic sequences by PromoterInspector: a novel context analysis approach. J. Mol. Biol., 297, 599-606.
-
(2000)
J. Mol. Biol.
, vol.297
, pp. 599-606
-
-
Scherf, M.1
Klingenhoff, A.2
Werner, T.3
-
18
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
Spellman,P.T., Sherlock,G., Zhang,M.Q., Iyer,V.R., Anders,K., Eisen,M.B., Brown,P.O., Botstein,D. and Futcher,B. (1998) Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell, 9, 3273-3297.
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
19
-
-
0034566082
-
Mining for putative regulatory elements in the yeast genome using gene expression data
-
AAAI Press European Bioinformatics Institute, EMBL Outstation, Hinxton, Cambridge
-
Vilo,J., Brazma,A., Jonassen,I., Robinson,A. and Ukkonen,E. (2000) Mining for putative regulatory elements in the yeast genome using gene expression data. Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology (ISMB-2000). AAAI Press European Bioinformatics Institute, EMBL Outstation, Hinxton, Cambridge, pp. 384-394.
-
(2000)
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology (ISMB-2000)
, pp. 384-394
-
-
Vilo, J.1
Brazma, A.2
Jonassen, I.3
Robinson, A.4
Ukkonen, E.5
-
20
-
-
0034748980
-
Regulatory sequence analysis: Application to interpretation of gene expression
-
Vilo,J. and Kivinen,K. (2001) Regulatory sequence analysis: application to interpretation of gene expression. Eur. Neuropsychopharmacol., 11, 399-411.
-
(2001)
Eur. Neuropsychopharmacol.
, vol.11
, pp. 399-411
-
-
Vilo, J.1
Kivinen, K.2
-
21
-
-
0036138322
-
2 easy steps
-
2 easy steps. Bioinformatics, 17, 1183-1197.
-
(2001)
Bioinformatics
, vol.17
, pp. 1183-1197
-
-
Wagner, A.1
-
22
-
-
0033563516
-
Promoter analysis of co-regulated genes in the yeast genome
-
Zhang,M.Q. (1999) Promoter analysis of co-regulated genes in the yeast genome. Comput. Chem., 23, 233-250.
-
(1999)
Comput. Chem.
, vol.23
, pp. 233-250
-
-
Zhang, M.Q.1
|