Nmr conformational studies of micelle-bound orexin-b: A neuropeptide involved in the sleep/awake cycle and feeding regulation

Journal of Biomolecular Structure and Dynamics

Volumn 21, Issue 3, 2003, Pages 341-351

  Miskolzie, Mark ^a   Lucyk, Scott ^a   Kotovych, George ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; DEXTRO AMINO ACID; DIPEPTIDE; DODECYL SULFATE SODIUM; G PROTEIN COUPLED RECEPTOR; LEUCINE; METHIONINE; NEUROPEPTIDE; OREXIN B; SERINE; STEARIC ACID DERIVATIVE; THREONINE;

AMINO ACID SUBSTITUTION; ARTICLE; CARBON NUCLEAR MAGNETIC RESONANCE; CARBOXY TERMINAL SEQUENCE; FEEDING; MEMBRANE BINDING; MICELLE; MOLECULAR MODEL; MOLECULAR RECOGNITION; MUTAGENESIS; NUCLEAR MAGNETIC RESONANCE; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE; RECEPTOR BINDING; REGULATORY MECHANISM; SLEEP WAKING CYCLE;

EID: 0346749402     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2003.10506930     Document Type: Article

References (49)

1. Sakurai, T., Amemiya, A., Ishii, M., Matsuzaki, I., Chemelli, R. M., Tanaka, H., Williams, S. C., Richardson, J. A., Kozlowski, G. P., Wilson, S., Arch, J. R. S., Buckingham, R. E., Haynes, A. C., Carr, S. A., Annan, R. S., McNulty, D. E., Liu, W-S., Terrett, J. A., Elshourbagy, N. A., Bergsma, D. J., and Yanagisawa, M., 1998. Cell, 92:573–585.
2. Willie, J. T., Chemelli, R. M., Sinton, C. M., and Yanagisawa, M., 2001. Annu. Rev. Neurosci., 24:429–458.
3. Nambu, T., Sakurai, T., Mizukami, K., Hosoya, Y., Yanagisawa, M., and Goto, K., 1999. Brain Res., 827:243–260.
4. Voisin, T., Rouet-Benzineb, P., Reuter, N., and Laburthe, M., 2003. Cell. Mol. Life Sci., 60:72–87.
5. Nishino, S., and Yoshida, Y., 2003. Sleep and Biolog. Rhythms, 1:43
6. Wilson, E. K., 2003. C. & EN, 27:51–55. January
7. Peyron, C., Faraco, J., Rogers, W., Ripley, B., Overeem, S., Charnay, Y., Nevsimalova, S., Aldrich, M., Reynolds, D., Albin, R., Li, R., Hungs, M., Pedrazzoli, M., Padigaru, M., Kucherlapati, M., Fan, J., Maki, R., Lammers, G. J., Bouras, C., Kucherlapati, R., Nishino, S., and Mignot, E., 2000. Nat. Med., 6:991–997.
8. Lin, L., Faraco, J., Li, R., Kadotani, H., Rogers, W., Lin, X., Qiu, X., Jong, P. J.d., Nishino, S., and Mignot, E., 1999. Cell, 98:365–376.
9. Rodgers, R. J., Ishii, Y., Halford, J. C. G., and Blundell, J. E., 2002. Neuropeptides, 36:303–325.
10. Collins, P., and Williams, G., 2001. Br. J. Clinical Pharmacol., 51:13–25.
11. Lee, J-H., Bang, E., Chae, K-J., Kim, J-Y., Lee, D. W., and Lee, W., 1999. Eur. J. Biochem, 266:831–839.
12. Schwyzer, R., 1986. Biochemistry, 25:6335–6342.
13. Schwyzer, R., 1991. Biopolymers, 31:785–792.
14. Schwyzer, R., 1995. Biopolymers, 37:5–16.
15. Henry, G. D., and Sykes, B. D., 1994. Methods Enzymol., 239:515–535.
16. Damberg, P., Jarvet, J., and Gräslund, A., 2001. Methods Enzymol., 339:271–285.
17. Miskolzie, M., and Kotovych, G., 2003. Biopolymers, 69:201–215.
18. Asahi, S., Egashira, S-I., Matsuda, M., Iwaasa, H., Kanatani, A., Ohkubo, M., Ihara, M., and Morishima, H., 2003. Bioorg. Med. Chem. Lett., 13:111–113.
19. States, D. J., Haberkorn, R. A., and Ruben, D. J., 1982. J. Magn. Reson., 48:286–292.
20. Bax, A., and Davis, D. G., 1985. J. Magn. Reson., 65:355–360.
21. Levitt, M., Freeman, R., and Frankiel, T., 1982. J. Magn. Reson., 47:328–330.
22. Jeener, J., Meier, B. H., Bachmann, P., and Ernst, R. R., 1979. J. Chem. Phys., 71:4546–4553.
23. Hurd, R. E., 1990. J. Magn. Reson., 87:422–428.
24. von Kienlin, M., Moonen, C. T. W., van der Toorn, A., and van Zijl, P. C.M., 1991. J. Magn. Reson., 93:423–429.
25. Kim, Y., and Prestegard, J. H., 1989. J. Magn. Reson., 84:9–13.
26. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A., 1995. J. Biomol. NMR., 6:277–293.
27. Johnson, B. A., and Blevins, R. A., 1994. J. Biomol. NMR., 4:603–614.
28. Nilges, M., Gronenborn, A. M., Brünger, A. T., and Clore, G. M., 1998. Protein Eng., 2:27–38.
29. Brünger, A. T., 1993. X-PLOR. Version 3.1:A system for X-ray crystallography and NMR New Haven, USA:Yale University Press.
30. Nilges, M., 1993. Proteins, 17:297–309.
31. Fletcher, C. M., Jones, D. N. M., Diamond, R., and Neuhaus, D., 1996. J. Biomol. NMR, 8:292–310.
32. Brünger, A. T., Adams, P. D., Clore, G. M., Delano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L., 1998. Acta Cryst., D54:905–921.
33. Koradi, R., Billeter, M., and Wüthrich, K., 1996. J. Mol. Graph., 14:51–55.
34. McDonnell, P. A., and Opella, S. J., 1993. J. Magn. Reson. Series B, 102:120–125.
35. Wüthrich, K., 1986. NMR of Proteins and Nucleic Acids New York:John-Wiley and Sons.
36. Wishart, D. S., Sykes, B. D., and Richards, F. M., 1991. J. Mol. Biol., 222:311–333.
37. Wishart, D. S., Bigam, C. G., Holm, A., Hodges, R. S., and Sykes, B. D., 1995. J. Biomol. NMR, 5:67–81.
38. Wishart, D. S., and Sykes, B. D., 1994. J. Biomol. NMR, 4:171–180.
39. Wishart, D. S., Sykes, B. D., and Richards, F. M., 1992. Biochemistry, 31:1647–1651.
40. Papavoine, C. H. M., Konings, R. N. H., Hilbers, C. W., and van de Ven, F. J.M., 1994. Biochemistry, 33:12990–12997.
41. Brown, L. R., Bösch, C., and Wüthrich, K., 1981. Biochim Biophys Acta, 642:296–312.
42. Blackledge, M. J., Bruschweiller, R., Griesinger, C., Schmidt, J. M., Xu, P., and Ernst, R. R., 1993. Biochemistry, 32:10960–10974.
43. Wang, J., Hodges, R. S., and Sykes, B. D., 1995. J. Am. Chem. Soc., 117:8627–8634.
44. Dyson, H. J., and Wright, P. E., 1995. FASEB J., 9:37–42.
45. Bader, R., Bettio, A., Beck-Sickinger, A. G., and Zerbe, O., 2001. J. Mol. Biol., 305:307–329.
46. Miskolzie, M., and Kotovych, G., 2003. J. Biomol. Struct. Dyn., 21:201–210.
47. Darker, J. G., Porter, R. A., Eggleston, D. S., Smart, D., Brough, S. J., Sabido-David, C., and Jerman, J. C., 2001. Bioorg. Med. Chem. Lett., 11:737–740.
48. 1996. The Merck Index, Twelfth Edition Whitehouse Station, New Jersey:Merck & Co. Inc.
49. Chemelli, R. M., Willie, J. T., Sinton, C. M., Elmquist, J. K., Scammell, T., Lee, C., Richardson, J. A., Williams, S. C., Xiong, Y., Kisanuki, Y., Fitch, T. E., Nakazato, M., Hammer, R. E., Saper, C. B., and Yanagisawa, M., 1999. Cell, 98:437–451.