S100A16, a ubiquitously expressed EF-hand protein which is up-regulated in tumors

Biochemical and Biophysical Research Communications

Volumn 313, Issue 2, 2004, Pages 237-244

  Marenholz, Ingo ^a   Heizmann, Claus W ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

Author keywords

Calcium binding protein; Chromosomal rearrangement; EF hand motif; Gene expression; Gene mapping; Gene organization; Human chromosome 1q21; Orthology; S100 gene family; Tumor promoter

Indexed keywords

PROTEIN S 100;

AMINO ACID COMPOSITION; AMINO ACID SEQUENCE; ARTICLE; CHROMOSOME 1Q; CHROMOSOME REARRANGEMENT; CONTROLLED STUDY; EXON; GENE CLUSTER; GENE CONTROL; GENE MAPPING; GENETIC CODE; GENETIC TRANSCRIPTION; HUMAN; HUMAN TISSUE; MALIGNANT TRANSFORMATION; MULTIGENE FAMILY; NEUROLOGIC DISEASE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN MOTIF; TUMOR; UPREGULATION;

MAMMALIA;

EID: 0345735306     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2003.11.115     Document Type: Article

References (22)

1. Heizmann C.W., Fritz G., Schafer B.W. S100 proteins: structure, functions and pathology. Front. Biosci. 7:2002;d1356-d1368.
2. Heizmann C.W., Cox J.A. New perspectives on S100 proteins: a multi-functional Ca(2+)-, Zn(2+)- and Cu(2+)-binding protein family. Biometals. 11:1998;383-397.
3. Fritz G., Heizmann C.W. 3D-Structures of the Ca2+- and Zn2+-binding S100 proteins. Bode W., Messerschmidt A., Cygler M. Handbook of Metalloproteins. vol. 3:2004;John Wiley & Sons, Chichester, New York.
4. Ridinger K., Ilg E.C., Niggli F.K., Heizmann C.W., Schafer B.W. Clustered organization of S100 genes in human and mouse. Biochim. Biophys. Acta. 1448:1998;254-263.
5. Chen Y.J., Vortmeyer A., Zhuang Z., Huang S., Jensen R.T. Loss of heterozygosity of chromosome 1q in gastrinomas: occurrence and prognostic significance. Cancer Res. 63:2003;817-823.
6. Wong N., Chan A., Lee S.W., Lam E., To K.F., Lai P.B., Li X.N., Liew C.T., Johnson P.J. Positional mapping for amplified DNA sequences on 1q21-q22 in hepatocellular carcinoma indicates candidate genes over-expression. J. Hepatol. 38:2003;298-306.
7. Itoyama T., Nanjungud G., Chen W., Dyomin V.G., Teruya-Feldstein J., Jhanwar S.C., Zelenetz A.D., Chaganti R.S. Molecular cytogenetic analysis of genomic instability at the 1q12-22 chromosomal site in B-cell non-Hodgkin lymphoma. Genes Chromosomes Cancer. 35:2002;318-328.
8. Forus A., Berner J.M., Meza-Zepeda L.A., Saeter G., Mischke D., Fodstad O., Myklebost O. Molecular characterization of a novel amplicon at 1q21-q22 frequently observed in human sarcomas. Br. J. Cancer. 78:1998;495-503.
9. Marenholz I., Zirra M., Fischer D.F., Backendorf C., Ziegler A., Mischke D. Identification of human epidermal differentiation complex (EDC)-encoded genes by subtractive hybridization of entire YACs to a gridded keratinocyte cDNA library. Genome Res. 11:2001;341-355.
10. Volz A., Korge B.P., Compton J.G., Ziegler A., Steinert P.M., Mischke D. Physical mapping of a functional cluster of epidermal differentiation genes on chromosome 1q21. Genomics. 18:1993;92-99.
11. Burge C.B., Tuschl T., Sharp P.A. Splicing of precursors to mRNAs by the spliceosomes. Gesteland R.F., Cech T.R., Atkins J.F. The RNA World II. 1999;525-560 Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
12. Marenholz I., Volz A., Ziegler A., Davies A., Ragoussis I., Korge B.P., Mischke D. Genetic analysis of the epidermal differentiation complex (EDC) on human chromosome 1q21: chromosomal orientation, new markers, and a 6-Mb YAC contig. Genomics. 37:1996;295-302.
13. Pietas A., Schluns K., Marenholz I., Schafer B.W., Heizmann C.W., Petersen I. Molecular cloning and characterization of the human S100A14 gene encoding a novel member of the S100 family. Genomics. 79:2002;513-522.
14. Brodersen D.E., Etzerodt M., Madsen P., Celis J.E., Thogersen H.C., Nyborg J., Kjeldgaard M. EF-hands at atomic resolution: the structure of human psoriasin (S100A7) solved by MAD phasing. Structure. 6:1998;477-489.
15. Reddy P.H., Stockburger E., Gillevet P., Tagle D.A. Mapping and characterization of novel (CAG)n repeat cDNAs from adult human brain derived by the oligo capture method. Genomics. 46:1997;174-182.
16. Albertazzi E., Cajone F., Sherbet G.V. Characterization of a splice variant of metastasis-associated h-mts1 (S100A4) gene expressed in human infiltrating carcinomas of the breast. DNA Cell Biol. 17:1998;1003-1008.
17. South A.P., Cabral A., Ives J.H., James C.H., Mirza G., Marenholz I., Mischke D., Backendorf C., Ragoussis J., Nizetic D. Human epidermal differentiation complex in a single 2.5. Mbp long continuum of overlapping DNA cloned in bacteria integrating physical and transcript maps J. Invest. Dermatol. 112:1999;910-918.
18. Wicki R., Franz C., Scholl F.A., Heizmann C.W., Schafer B.W. Repression of the candidate tumor suppressor gene S100A2 in breast cancer is mediated by site-specific hypermethylation. Cell Calcium. 22:1997;243-254.
19. Mandinova A., Soldi R., Graziani I., Bagala C., Bellum S., Landriscina M., Tarantini F., Prudovsky I., Maciag T. S100A13 mediates the copper-dependent stress-induced release of IL-1alpha from both human U937 and murine NIH 3T3 cells. J. Cell Sci. 116:2003;2687-2696.
20. Fritz G., Mittl P.R., Vasak M., Grutter M.G., Heizmann C.W. The crystal structure of metal-free human EF-hand protein S100A3 at 1.7-A resolution. J. Biol. Chem. 277:2002;33092-33098.
21. Wolf R., Mirmohammadsadegh A., Walz M., Lysa B., Tartler U., Remus R., Hengge U., Michel G., Ruzicka T. Molecular cloning and characterization of alternatively spliced mRNA isoforms from psoriatic skin encoding a novel member of the S100 family. Faseb J. 2003.
22. Kulski J.K., Lim C.P., Dunn D.S., Bellgard M. Genomic and phylogenetic analysis of the S100A7 (Psoriasin) gene duplications within the region of the S100 gene cluster on human chromosome 1q21. J. Mol. Evol. 56:2003;397-406.