Molecular characterization of a novel amplicon at 1q21-q22 frequently observed in human sarcomas

British Journal of Cancer

Volumn 78, Issue 4, 1998, Pages 495-503

  Forus, A ^a   Berner, J M ^a   Meza Zepeda, L A ^a   Saeter, G ^a   Mischke, D ^b   Fodstad, O ^a   Myklebost, O ^a  

^a OSLO UNIVERSITY HOSPITAL   (Norway)

^b CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

Author keywords

1q21 q22; Amplification; Chromosome 1; Sarcomas

Indexed keywords

ARTICLE; BONE TUMOR; BREAST CARCINOMA; CHROMOSOME 1Q; FLUORESCENCE IN SITU HYBRIDIZATION; HUMAN; HUMAN TISSUE; MELANOMA; PRIORITY JOURNAL; SARCOMA; SOFT TISSUE TUMOR; YEAST ARTIFICIAL CHROMOSOME;

EID: 0031858675     PISSN: 00070920     EISSN: None     Source Type: Journal    
DOI: 10.1038/bjc.1998.521     Document Type: Article

References (58)

1. Albertsen HM, Abderrahim H, Cann HM, Dausset J, Le Paslier D and Cohen D (1990) Construction and characterisation of a yeast artificial chromosome library containing seven haploid human genome equivalents. Proc Natl Acad Sci USA 87: 4256-4260
2. Alitalo K and Schwab M (1986) Oncogene amplification in tumor cells. Adv Cancer Res 47: 235-281
3. Armengol G, Tarkkanen M, Virolainen M, Forus A, Valle J, Böhling T, Asko-Seljavaara S, Blomquist C, Elomaa I, Karaharju E, Kivioja AH, Siimes MA, Tukiainen E, Caballin MR, Myklebost O and Knuutila S (1997) Recurrent gains of 1q8 and 12 in the Ewing family of tumours by comparative genomic hybridisation. Br J Cancer 75: 1403-1409
4. Berner J-M, Forus A, El Kahloun A, Meltzer PS, Fodstad Ø and Myklebost O (1996) Separate amplified regions encompassing CDK4 and MDM2 in human sarcomas. Genes Chrom Cancer 17: 254-259
5. Berner J-M, Meza-Zepeda LA, Kools PFJ, Forus A, Schoenmakers EFPM, Van de Ven WJM, Fodstad Ø and Myklebost O (1997) HMGIC, the gene for an architectural transcription factor, is amplified and rearranged in a subset of human sarcomas. Oncogene 14: 2935-2941
6. Bieche I and Lidereau R (1997). A gene dosage effect is responsible for high overexpression of the MUCI gene observed in human breast tumours. Cancer Genet Cytogenet 98: 75-80
7. Bieche I, Champeme M-H and Lidereau R (1995) Loss and gain of distinct regions of chromosome 1q in primary breast cancer. Clin Cancer Res 1: 123-127
8. Dal Cin P, Kools P, Sciot R, De Wever I, Van Damme B, Van de Ven W and Van den Berghe H (1993) Cytogenetic and fluorescence in situ hybridization investigation of ring chromosomes characterizing a specific pathologic subgroup of adipose tissue tumors. Cancer Genet Cytogenet 68: 85-90
9. Dracopoli NC, Bruns GAP, Brodeur GM, Landes GM, Matise TC, Seldin MF, Vance JM and Weith A (1994) Report of the first international workshop on human chromosome 1 mapping 1994. Cytogenet Cell Genet 67: 144-165
10. Eckert RL and Green H (1986) Structure and evolution of the human involuerin gene. Cell 46: 583-589
11. Forus A, Florenes VA, Maclandsmo GM, Meltzer PS. Fodstad Ø and Myklebost O (1993) Mapping of amplification units in the q13-14 region of chromosome 12 in human sarcomas: some amplica do not include MDM2. Cell Growth Differ 4: 1065-1070
12. Forus A, Florenes VA, Maelandsmo GM, Fodstad Ø and Myklebost O (1994) 12q13 14 amplica in human sarcomas without MDM2 include CDK4, SAS and GADD153/CHOP. Cancer Genet Cytogenet 77: 200
13. Forus A, Olde Weghuis D. Smeets D. Fodstad Ø, Myklebost O and Geurts van Kessel A (1995a) Comparative genomic hybrization analysis of human sarcomas, I, Occurrence of genomic imbalances and identification of a novel major amplicon at 1q21-q22 in soft tissue sarcomas. Genes Chrom Cancer 14: 8-14
14. Forus A, Olde Weghuis D, Smeets D, Fodstad Ø, Myklebost O and Geurts van Kessel A (1995b) Comparative genomic hybridization analysis of human sarcomas. II. Identification of novel amplicons at 6p and 17p in osteosarcomas. Genes Chrom Cancer 14: 15-21
15. Gaudray P, Szepetowski P, Escol C, Birnbaum D and Thelliet C (1992) DNA amplification at 11q13 in human cancer: from complexity to perplexity. Mutat Res 276: 317-328
16. Gibbs S, Fijneman R, Wiegant J, Geurts van Kessel A, van de Putte P and Backendorf C (1993) Molecular characterization and evolution of the SPRR family of keratinocyte differentiation markers encoding small proline-rich proteins. Genomics 16: 630-637
17. Heim S, Mandabl N, Kirstoffersson U, Mitelman F, Rooster B, Rydholm A and Willen H (1987) Marker ring chromosome: a new cytogenetic abnormality characterizing lipogenetic tumors. Cytogenet Cell Genet 24: 319-326
18. Hobl D, de Viragh PA, Amiguet-Barras F, Gibbs S, Backendorf C and Huber M (1995) The small proline-rich proteins constitute a multigene family of differentially regulated cornified cell envelope processor proteins. J Invest Dermatol 104: 902-909
19. Huang LS, Bock SC, Feinstein SI and Breslow JL (1985) Human apolipoprotein B cDNA clone isolation and demonstration that liver apolipoprotein B mRNA is 22 kilo bases in length, proc Natl Acad USA 82: 6825-6829
20. Kallioniemi A, Kallioniemi O-P, Sudar D, Rutovitz D, Gray JW, Waldman F and Pinkel D (1992) Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors, Science 258: 818-821
21. Kallioniemi A, Kallioniemi O-P, Piper J, Tanner M, Stokke T, Chen L, Smith HS, Pinkel D, Gray JW and Waldman FM (1994) Detection and mapping of amplified DNA sequences in breast cancer by comparative genomic hybridization. Proc Natl Acad Sci USA 91: 2156-2160
22. Kallioniemi O-P, Kallioniemi A, Piper J, Isola J, Waldman FM, Gray JW and Pinkel D (1944) Optimizing comparative genomic hybridization for analysis of DNA sequence copy number changes in solid tumors. Genes Chromosom Cancer 10: 231-243
23. Khatib ZA, Matsushime H, Valentine M, Shapiro DN, Sherr CJ and Look AT (1993) Coamplification of the CDK4 gene with MDM2 and GLI in human sarcomas. Cancer Res 53: 5535-5541
24. Kovacs G (1978) Abnormalities of chromosome no.1 in human solid malignant tumours. Int J Cancer 1: 688-694
25. Larramendy ML, Tarkkanen M, Blomqvist C, Virolainen M, Wiklund T, Asko-Seljavaara S, Elomaa I and Knuutila S (1997) Comparative genomic hybridization of malignant fibrous histiocytoma reveals a novel prognostic marker. Am J Pathol 151: 1153-1161
26. Lee SW, Tomasetto C, Swisshelm K, Keyomarsi K and Sager R (1992) Down-regulation of a member of the S 100 gene family in mammary carcinoma cells and re-expression by azadeoxycytidine treatment. Proc Natl Acad Sci 89: 2504-2508
27. Maelandsmo GM, Berner J-M, Flørenes VA, Forus A, Hovig E, Fodstad Ø and Myklebost O (1995) Homozygous deletion frequency and expression levels of the CDKN2 gene in human sarcomas - relationship to amplification and mRNA levels of CDK4 and CCND1. Br J Cancer 72: 393-398
28. Maelandsmo GM, Flørenes VA, Mellingsaeter T, Hovig H, Kerberl RS and Fodstad Ø (1997) Differential expression patterns of S100A2, S100A4 and S100A6 during progression of human malignant melanoma. Int J Cancer 74: 464-469
29. Makela TP, Kere J, Winquist R and Alitalo K (1991) Intrachromosomal rearrangements fusing L-myc and rlf in small-cell lung cancer. Mol Cell Biol 11: 4015-4021
30. Marenholz I, Volz A, Ziegler A, Davies A, Ragoussis I, Korge BP and Mischke D (1996) Genetic analysis of the epidermal differentiation complex (EDC) on human chromosome 1q21: chromosomal orientation, new markers and a 6 Mbp YAC contig. Genomics 37: 295-302
31. Muleris M, Almeida A, Gerbault-Seureau M, Malfoy B and Dutrillaux B (1994) Detection of DNA amplification in 17 primary breast carcinomas with homogeneously staining regions by modified comparative genomic hybridization technique. Genes Chromosom Cancer 10: 160-170
32. Murray JC, Buetow KH, Weber JL, Ludwigsen S, Scherpbier-Heddema T, Manion F, Quillen J, Sheffield VC, Sunden S, Dukyk GM (Cooperative Human Linkage Center); Weissenbach J, Gyapay G, Dib C, Morrissette J, Lathrop GM, Vignal (Généthon); White R, Matsunami N, Gerken S, Melis R, Alberten H, Plaetke R, Odelberg S (University of Utah); Ward D (Yale University); Dausset J, Cohen D and Cann (Centre d'Etude du Polymorphisme Humain. CEPH) (1994) A comprehensive human linkage map with centimorgan density. Science 265: 2049-2054
33. Nau MM, Brooks BJ, Battey J, Sausville E, Gazdar AF, Kirsch IR, McBride OW, Bertness V, Hollis GF and Minna JD (1985) L-myc, a new myc-related gene amplified and expressed in human small cell lung cancer. Nature 318: 69-73
34. Nilbert M, Rydholm A, Willen H, Mitelman F and Mandahl N (1994) MDM2 gene amplification correlates with ring chromosomes in soft tissue tumors. Genes Chrom Cancer 9: 261-265
35. Nilbert M, Rydholm A, Mitelman F, Meltzer PS and Mandahl N (1995) Characterization of the 12q13-15 amplicon in soft tissue sarcomas. Cancer Genet Cytogenet 83: 32-36
36. Örndal C, Mandahl N, Rydholm A, Willen H, Brosjo O, Heim S and Mitelman F (1992) Supernumerary ring chromosomes in five bone and soft tissue tumors of low borderline malignancy. Cancer Genet Cytogenet 60: 170-175
37. Oshimura M, Sonta S-i and Sandberg AA (1976) Trisomy of the long arm of chromosome no. 1 in human leukaemia. J Natl Cancer Inst 56: 183-184
38. Pedeutour F, Suijkerbuijk RF, Van Gaal J, Van de Klundert W, Coindre J-M, Van Haelst A, Collin F, Huffermann K and Turc-Carel C (1993) Chromosome 12 origin in rings and giant markers in well-differentiated liposarcoma. Cancer Genet Cytogenet 66: 133-134
39. Pedeutour F, Forus A, Coindre J-M, Berner J-M, Nicolo G, Michelis J-F, Terrier P, Ranchere-Vince D, Collin F, Myklebost O and Turc-Carel C (1998) Structure of the supernumerary ring and giant rod chromosomes in adipose tissue tumours. Gen Chrom Cancer (in press)
40. Pedeutour F, Suijkerhuijk RF, Forus A, van Gaal J, van de Klundert W, Coindre J-M, Nicolo G, Collin F, van Haelst U, Huffermann K and Turc-Carel C (1994) Complex composition and co-amplification of SAS and MDM2 in ring and giant rod marker chromosomes in well-differentiated liposarcoma. Genes Chromosom Cancer 10: 85-94
41. Presland RB, Haydock PV, Fleckman P, Nirunsuksiri W and Dale BA (1992) Characterization of the human epidermal profilaggrin gene. Genomic organization and identification of an S-100 like calcium binding domain at the amino terminus. J Biol Chem 267: 23772-23781
42. Rogne S, Myklebost O, Høyheim B, Olaisen B and Gedde Dahl TJ (1989) The genes for apolipoprotein AII (APOA2) and the Duffy blood group (FY) are linked on chromosome I in man. Genomics 4: 169-173
43. Rowley JD (1977) Mapping of human chromosomal regions related to neoplasia: evidence from chromosome 1 and 17. Proc Natl Acad Sci USA 74: 5729-5733
44. Schäfer BW and Heizmann CW (1946) The S100 family of EF hand calcium binding proteins: function and pathology. Trends Biol Sci 21: 134-140
45. Schäfer BW, Wicki R, Engelkamp D, Mattei M-G and Heizmann CW (1995) Isolation of a YAC clone covering a cluster of nine S100 genes on human chromosome Iq21: rationale for a new nomenclature of the S100 calciumbinding protein family. Genomics 25: 638-643
46. Sehajowich F (1993) Histological Typing of Bone Tumours. Springer-Verlag: Berlin
47. Swallow DM, Gendler S, Griffiths B, Corney G, Taylor-Papadimitriou J and Bramwell ME (1987) The human tumour-associated epithelial mucins are coded by an expressed hyper variable gene locus PUM. Nature 328: 82-84
48. Szymanska J, Tarkkanen M, Wiklund T, Virolainen M, Blomquist C, Asko-Seljavaara S, Tukiainen E, Elomaa I and Knuutila S (1996) Gains and losses of DNA sequences in liposarcomas evaluated by comparative genomic hybridization. Genes Chrom Cancer 15: 89-94
49. Szymanska J, Virolainen M, Tarkkanen M, Wiklund T, Asko-Seljavaara S, Tukiainen E, Elomaa I. Blomqvist C and Knuutila S (1997) Overrepresentation of 1q21-23 and 12q13-21 in lipoma-like liposarcomas but not in benign lipomas: a comparative genomic hybridization study. Cancer Genet Cytogenet 99: 14-18
50. Tarkkanen M, Karhu R, Kallioniemi A, Elomaa I, Kivioja AH, Nevalainen J, Bohling T, Karaharju E, Hyytinen E, Knuutila S and Kallioniemi O-P (1995) Gains and losses of DNA sequences in osteosarcomas by comparative genomic hybridization. Cancer Res 55: 1334-1338
51. Tsarfati I, Hareuveni M, Horev J, Zaretski J, Weiss M, Jeltsch JM, Garnier JM, Lathe R, Keydar I and Wreschner DH (1990) Isolation and characterization of a hyper-variable gene coding for breast-cancer associated antigen. Gene 93: 313-318
52. Tucci A, Goldberger G, Whitehead AS, Kay RM, Woods DE and Colten HR (1983) Biosynthesis and postsynthetic processing of human C-reactive protein. J Immunol 131: 2416-2419
53. Weber-Hall S, Anderson J, McManus A, Abe S, Nojima T, Pinkerton R, Pritchard-Jones K and Shipley J (1996) Gains, losses and amplification of genomic material in rhabdomyosarcoma analyzed by comparative genomic hybridization. Cancer Res 56: 3220-3224
54. Weiss SW (1994) Histological Typing of Soft Tissue Tumours. Springer-Verlag: Berlin
55. Weith A, Brodeur GM, Bruns GA, Matise TC, Mischke D, Nizetic D, Seldin MF, van Roy N and Vance J (1996) Report of the second international workshop on human chromosome 1 mapping 1995. Cytogenet Cell Genet 72: 113-154
56. Weterman MAJ. Stoopen GM, van Muijen GNP, Kuznick J, Ruiter DJ and Bloemers HPJ (1992) Expression of calcyclin in human melanoma cell lines correlates with metastatic behaviour in nude mice. Cancer Res 52: 1291-1296
57. Weterman MAJ, Wilbrink M, Dijkhuizen T, van den Berg E and Geurts van Kessel A (1996) Fine mapping of the 1q21 breakpoint of the papillary renal cell carcinoma-associated (X;1) translocation. Hum Genet 98: 16-21
58. Wolf M, Aaltonen LA, Szymanska J, Tarkkanen M, Blomquist C, Berner J-M, Myklebost O and Knuutila S (1997) Complexity of 12q13-22 amplicon in liposarcoma: microsatellite repeat analysis. Genes Chrom Cancer 18: 66-70