Time-Resolved Resonance Raman and Time-Resolved Step-Scan FTIR Studies of Nitric Oxide Reductase from Paracoccus denitrificans: Comparison of the Heme b3-FeB Site to That of the Heme-CuB in Oxidases

Biochemistry

Volumn 42, Issue 50, 2003, Pages 14856-14861

  Pinakoulaki, Eftychia ^a   Varotsis, Constantinos ^a  

^a UNIVERSITY OF CRETE   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

STRUCTURAL DYNAMICS;

CARBON MONOXIDE; DISSOCIATION; FOURIER TRANSFORM INFRARED SPECTROSCOPY; NITROGEN OXIDES; PHOTOLYSIS; RAMAN SPECTROSCOPY;

ENZYMES;

HEME; NITRIC OXIDE REDUCTASE; OXIDOREDUCTASE;

ARTICLE; DISSOCIATION; ENZYME STRUCTURE; INFRARED SPECTROSCOPY; LIGAND BINDING; MOLECULAR DYNAMICS; NONHUMAN; PARACOCCUS DENITRIFICANS; PHOTOLYSIS; PRIORITY JOURNAL; RAMAN SPECTROMETRY; STRUCTURE ANALYSIS;

CARBON MONOXIDE; COPPER; ELECTRON TRANSPORT COMPLEX IV; HEME; IRON; LIGANDS; OXIDOREDUCTASES; PARACOCCUS DENITRIFICANS; PHOTOLYSIS; SPECTROPHOTOMETRY; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; SPECTRUM ANALYSIS, RAMAN; THERMODYNAMICS;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PARACOCCUS DENITRIFICANS;

EID: 0345733996     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi035289m     Document Type: Article

References (30)

1. Hendriks, J., Warne, A., Gohlke, U., Haltia, T., Ludovici, C., Lübben, M., and Saraste, M. (1998) Biochemistry 37, 13102-13109.
2. Moënne-Loccoz, P., and de Vries, S. (1998) J. Am. Chem. Soc. 120, 5147-5152.
3. Pinakoulaki, E., Gemeinhardt, S., Saraste, M., and Varotsis C. (2002) J. Biol. Chem. 277, 23407-23413.
4. Hendriks, J. H. M., Prior, L., Baker, A. R., Thomson, A. J., Saraste, M., and Watmough, N. J. (2001) Biochemistry 40, 13361-13369.
5. Giuffrè, A., Stubauer, G., Sart, P., Brunori, M., Zumft, W. G., Buse, G., and Soulimane, T. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 14718-14723.
6. Findsen, E. W., Centeno, J., Babcock, G. T., and Ondrias, M. R. (1986) J. Am. Chem. Soc. 109, 5367-5372.
7. Varotsis, C., and Babcock, G. T. (1995) J. Am. Chem. Soc. 117, 11260-11269.
8. Varotsis, C., and Babcock, G. T. (1993) Methods Enzymol. 226, 409-431.
9. Schelvis, H., Varotsis, C., Deinum, G., Ferguson-Miller, S., and Babcock, G. T. (1997) J. Am. Chem. Soc. 119, 8409-8416.
10. Varotsis, C., Kreszowski, D. H., and Babcock, G. T. (1996) Biospectroscopy 2, 331-338.
11. Rousseau, D. L. and Friedman, J. L. (1998) In Biological Applications of Raman Spectroscopy (Spiro, T. G., Ed.) Vol. 3, pp 133-215, John Wiley & Sons: New York.
12. Koutsoupakis, K., Stavrakis, S., Pinakoulaki, E., Soulimane, T., and Varotsis, C. (2002) J. Biol. Chem. 277, 32860-32866.
13. Dyer, R. B., Einarsdóttir, O., Killough, P. M., Lopez-Garriga, J. J., and Woodruff, W. H. (1989) J. Am. Chem. Soc. 111, 7657-7659.
14. Dyer, R. B., Peterson, K. A, Stoutland, P. O., and Woodruff, W. H. (1994) Biochemistry 33, 500-507.
15. Stavrakis, S., Koutsoupakis, K., Pinakoulaki, E., Urbani, A., Saraste, M., and Varotsis, C. (2002) J. Am. Chem. Soc. 124, 3814-3815.
16. Koutsoupakis, K., Soulimane, T., and Varotsis, C. (2003) J. Biol. Chem. 278, 14893-14896.
17. Pinakoulaki, E., Soulimane, T., and Varotsis, C. (2002) J. Biol. Chem. 277, 32866-32874.
18. Stavrov, S. (1993) New J. Chem. 17, 71-76.
19. Stavrov, S. (1993) Biophys. J. 65, 1942-1950.
20. Hendler, R. W., Pardhasaradhi, K., Reynafarje, B., and Ludwig, B. (1991) Biophys. J. 60, 415-423.
21. Hendriks, J. H. M., Jasaitis, A., Saraste, M., and Verkhovsky, M. I. (2002) Biochemistry 41, 2331-2340.
22. Pinakoulaki, E., Pfitzner, U., Ludwig, B., and Varotsis, C. (2002) J. Biol. Chem. 277, 13563-13568.
23. Kitagawa, T. (1998) in Biological Applications of Raman Spectroscopy (Spiro, T. G., Ed.) Vol. 3, pp 97-131, John Wiley & Sons: New York.
24. Rost, B., Behr, J., Hellwig, P., Richter, O.-M. H., Ludwig, B., Michel, H., Mäntele, W. (1999) Biochemistry 38, 7565-7571.
25. Woodruff, W. H. (1993) J. Bioenerg. Biomembr. 25, 177-188.
26. Oertling, W. A., Surerus, K. K., Einarsdóttir, O., Fee, J. A. Dyer, R. B., Woodruff, W. H. (1994) Biochemistry 33, 3128-3141.
27. Pinakoulaki, E., Pfitzner, U., Ludwig, B., and Varotsis, C. (2003) J. Biol. Chem. 278, 18761-18766.
28. Rousseau, D. L., Singh, S., Ching, Y-c., and Sassaroli, M. (1988) J. Biol. Chem. 263, 5681-5685.
29. Stavrakis, S., Pinakoulaki, E., Urbani, A., and Varotsis, C. (2002) J. Phys. Chem. B 106, 12860-12862.
30. Pinakoulaki, E., Stavrakis, S., Urbani, A., and Varotsis C. (2002) J. Am. Chem. Soc. 124, 9378-9379.