Sequence-ready contig for the 1.4-cM ductal carcinoma in situ loss of heterozygosity region on chromosome 8p22-p23

Genomics

Volumn 60, Issue 1, 1999, Pages 1-11

  Wang, J C ^a   Radford, D M ^a   Holt, M S ^a   Helms, C ^a   Goate, A ^a   Brandt, W ^a   Parik, M ^a   Phillips, N J ^b   Deschryver, K ^c   Schuh, M E ^d   Fair, K L ^a   Ritter, J H ^a   Marshall, P ^a   Donis Keller, H ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b SAINT LOUIS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c West Central Pathologists Inc   (United States)

^d Parkcrest Surgical Associates Inc   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG;

ARTICLE; BREAST CARCINOMA; CARCINOMA IN SITU; CHROMOSOMAL LOCALIZATION; CHROMOSOME 8P; CHROMOSOME LOSS; DNA FLANKING REGION; GENE TARGETING; GENETIC HETEROGENEITY; GENETIC LINKAGE; HETEROZYGOSITY; HUMAN; HUMAN TISSUE; MOLECULAR CLONING; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; TRANSCRIPTION REGULATION; TUMOR SUPPRESSOR GENE;

EID: 0345426304     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1999.5905     Document Type: Article

References (37)

1. Adelaide J., Chaffanet M., Imbert A., Allione F., Geneix J., Popovici C., van Alewijk D., Trapman J., Zeillinger R., Borresen-Dale A. L., Lidereau R., Birnbaum D., Pebusque M. L. Chromosome region 8p11-p21: Refined mapping and molecular alternations in breast cancer. Genes Chromosomes Cancer. 22:1998;186-199.
2. Aldaz C. M., Chen T., Sahin A., Cunningham J., Bondy M. Comparative allelotype of in situ and invasive human breast cancer: High frequency of microsatellite instability in lobular breast carcinomas. Cancer Res. 55:1995;3976-3981.
3. Anbazhagan R., Fujii H., Gabrielson E. Allelic loss of chromosomal arm 8p in breast cancer progression. Am. J. Pathol. 152:1998;815-819.
4. Bookstein R., Levy A., MacGrogan D., Lewis T. B., Weissenbach J., O'Connell P., Leach R. J. Yeast artificial chromosome and radiation hybrid map of loci in chromosome band 8p22, a common region of allelic loss in multiple human cancers. Genomics. 24:1994;317-323.
5. Bova G. S., MacGrogan D., Levy A., Pin S. S., Bookstein R., Isaacs W. B. Physical mapping of chromosome 8p22 markers and their homozygous deletion in a metastatic prostate cancer. Genomics. 35:1996;46-54.
6. Broders A. C. Carcinoma in situ contrasted with benign penetrating epithelium. J. Am. Med. Assoc. 99:1932;1670-1674.
7. Chuaqui R. F., Sanz-Ortega J., Vocke C., Linehan W. M., Sanz-Esponera J., Zhuang Z., Emmert-Buck M. R., Merino M. J. Loss of heterozygosity on the short arm of chromosome 8 in male breast carcinomas. Cancer Res. 55:1995;4995-4998.
8. Dahiya R., Perinchery G., Dong G., Lee C. Multiple sites of loss of heterozygosity on chromosome 8 in human breast cancer has differential correlation with clinical parameters. Int. J. Oncol. 12:1998;811-816.
9. Deloukas P., Schuler G. D., Gyapay G., Beasley E. M., Soderlund C., Rodriguez-Tome P., Hui L., Matise T. C., McKusick K. B., Beckmann J. S., Bentolila S., Bihoreau M.-T., Birren B. B., Browne J., Butler A., Castle A. B., Chiannilkulchai N., Clee C., Day P. J. R., Dehejia A., Dibling T., Drouot N., Duprat S., Fizames C., Fox S., Gelling S., Green L., Harrison P., Hocking R., Holloway E., Hunt S., Keil S., Lijnzaad P., Louis-Dit-Sully C., Ma J., Mendis A., Miller J., Morissette J., Muselet D., Nusbaum H. C., Peck A., Rozen S., Simon D., Slonim D. K., Staples R., Stein L. D., Stewart E. A., Suchard M. A., Thangarajah T., Vega-Czarny N., Webber C., Wu X., Hudson J., Auffray C., Nomura N., Sikela J. M., Polymeropoulos M. H., James M. R., Lander E. S., Hudson T. J., Myers R. M., Cox D. R., Weissenbach J., Boguski M. S., Bentley D. R. A physical map of 30,000 human genes. Science. 282:1998;744-746.
10. Emi M., Fujiwara Y., Nakajima T., Tsuchiya E., Tsuda H., Hirohashi S., Maeda Y., Tsuruta K., Miyaki M., Nakamura Y. Frequent loss of heterozygosity for loci on chromosome 8p in hepatocellular carcinoma, colorectal cancer and lung cancer. Cancer Res. 52:1992;5368-5372.
11. Farrington S. M., Cunningham C., Boyle S. M., Wyllie A. H., Dunlop M. G. Detailed physical and deletion mapping of 8p with isolation of YAC clones from tumour suppressor loci involved in colorectal cancer. Oncogene. 12:1996;1803-1808.
12. Harder J., Siebert R., Zhang Y., Matthiesen P., Christophers E., Schlegelberger B., Schroder J.-M. Mapping of the gene encoding human β-defensin-2 (DEFB2) to chromosome region 8p22-23.1. Genomics. 46:1997;472-475.
13. Hughes S. J., Glover T. W., Zhu X.-X., Kuick R., Thoraval D., Orringer M. B., Beer D. G., Hanash S. A novel amplicon at 8p22-23 results in overexpression of cathepsin B in esophageal adenocarcinoma. Proc. Natl. Acad. Sci. USA. 95:1998;12410-12415.
14. Ishwad C. S., Shuster M., Bockmuhl U., Thakker N., Shah P., Toomes C., Dixon M., Ferrell R. E., Gollin S. M. Frequent allelic loss and homozygous deletion in chromosome band 8p23 in oral cancer. Int. J. Cancer. 80:1999;25-31.
15. Kerangueven F., Essioux L., Dib A., Noguchi T., Allione F., Geneix J., Longy M., Lidereau R., Eisinger F., Pebusque M-J., Jacquemier J., Bonaiti-Pellie C., Sobol H., Birnbaum D. Loss of heterozygosity and linkage analysis in breast carcinoma: Indication for a putative third susceptibility gene on the short arm of chromosome 8. Oncogene. 10:1995;1023-1026.
16. Lunetta K., Boehnke M., Lange K., Cox D. R. Selected locus and multiple panel models for radiation hybrid mapping. Am J. Hum. Genet. 59:1996;717-725.
17. Marshall C. J. Tumor suppressor genes. Cell. 64:1991;313-326.
18. Mueller P. R., Wold B. In vivo footprinting of a muscle specific enhancer by ligation mediated PCR. Science. 246:1989;780-786.
19. Nagai H., Pineau P., Tiollais P., Buendia M. A., Dejean A. Comprehensive alleotyping of human hepatocellular carcinoma. Oncogene. 14:1997;2927-2933.
20. O'Connell P., Pekkel V., Fuqua S. A. W., Osborne C. K., Clark G. M., Allred D. C. Analysis of loss of heterozygosity in 399 premalignant breast lesions at 15 genetic loci. J. Natl. Cancer Inst. 90:1998;697-703.
21. Perinchery G., Bukurov N., Nakajima K., Chang J., Hooda M., Bookstein R., Dahiya R. Loss of two new loci on chromosome 8 (8p23 and 8q12-13) in human prostate cancer. Int. J. Oncol. 14:1999;495-500.
22. Radford D. M., Fair K., Thompson A. M., Ritter J. H., Holt M. S., Wallace M. W., Wells S. A. Jr., Donis-Keller H. R. Allelic loss on chromosome 17 in ductal carcinoma in situ of the breast. Cancer Res. 53:1993;2947-2950.
23. Radford D. M., Fair K. L., Phillips N. J., Ritter J. H., Steinbrueck T., Holt M. S., Donis-Keller H. R. Allelotyping of ductal carcinoma in situ (DCIS) of the breast; deletion of loci on 8p,13q,16q,17p and 17q. Cancer Res. 55:1995;3399-3405.
24. Rogers L. W. Carcinoma in situ (CIS). Page D. L., Anderson T. J. Diagnostic Histopathology of the Breast. 1987;Churchill Livingstone, Edinburgh.
25. Sager R. Tumor suppressor genes: The puzzle and the promise. Science. 246:1989;1406-1413.
26. Seitz S., Rohde K., Bender E., Nothnagel A., Pidde H., Ullrich O-M., El-Zehairy A., Haensch W., Jandrig B., Kolble K., Schlag P. M., Scherneck S. Deletion mapping and linkage analysis provide strong indication for the involvement of the human chromosome region 8p12-p22 in breast carcinogenesis. Br. J. Cancer. 76:1997a;983-991.
27. Seitz S., Rohde K., Bender E., Nothnagel A., Kolble K., Schlag P. M., Scherneck S. Strong indication for a breast cancer susceptibility gene on chromosome 8p12-p22: Linkage analysis in German breast cancer families. Oncogene. 14:1997b;741-743.
28. Stewart E. A., McKusick K. B., Aggarwal A., Bajorek E., Brady S., Chu A., Fang N., Hadley D., Harris M., Hussain S., Lee R., Mararukulam A., O'Connor K., Perkins S., Piercy M., Qin F., Reif T., Sanders C., She X., Sun W. L., Tabar P., Voyticky S., Coeles S., Fan J. B., Mader C., Quackenbush J., Myers R. M., Cox D. R. An STS-based radiation hybrid map of the human genome. Genome Res. 7:1997;422-433.
29. Sunwoo J. B., Holt M. S., Radford D. M., Deeker C., Scholnick S. Evidence for multiple tumor suppressor genes on chromosome arm 8p in supraglottic laryngeal cancer. Genes Chromosomes Cancer. 16:1996;164-169.
30. Vocero-Akbani A., Helms C., Wang J-C., Sanjurjo F. J., Korte-Sarfaty J., Veile R. A., Liu L., Jauch A., Burgess A. K., Hing A., Holt M. S., Ramachandra S., Whelan A. J., Anker R., Ahrent L., Chen M., Gavin M. R., Iannantuoni K., Morton S. M., Pandit S. D., Read C. M., Steinbrueck T., Warlick C., Smoller D. A., Donis-Keller H. Mapping human telomere regions with YAC and P1 clones: Chromosome specific markers for 27 telomeres including 149 STSs and 24 polymorphisms for 14 proterminal regions. Genomics. 36:1996;492-506.
31. Vocke C. D., Pozzatti R. O., Bostwick D. G., Florence C. D., Jennings S. B., Strup S. E., Duray P. H., Liotta L. A., Emmert-Buck M. R., Linehan W. M. Analysis of 99 microdissected prostate carcinomas reveals a high frequency of allelic loss on chromosome 8p12-21. Cancer Res. 56:1996;2411-2416.
32. Wood S., Yaremko M. L., Schertzer M., Keleman P. R., Minna J., Westbrook C. A. Mapping of the pulmonary surfactant SP5 (SFTP2) locus to 8p21 and characterization of a microsatellite repeat marker that shows frequent loss of heterozygosity in human carcinomas. Genomics. 24:1994;597-600.
33. Wright K., Wilson P. J., Kerr J., Do K., Hurst T., Khoo S.-K., Ward B., Chenevix-Trench G. Frequent loss of heterozygosity and three critical regions on the short arm of chromosome 8 in ovarian adenocarcinomas. Oncogene. 17:1998;1185-1188.
34. Wu C. L., Roz L., Sloan P., Read A. P., Holland S., Porter S., Scully C., Speight P. M., Thakker N. Deletion mapping defines three discrete areas of allelic imbalance on chromosome arm 8p in oral and oropharyngeal squamous cell carcinomas. Genes Chromosomes Cancer. 20:1997;347-353.
35. Yaremko M. L., Recant W. M., Westbrook C. A. Loss of heterozygosity from the short arm of chromosome 8 is an early event in breast cancers. Genes Chromosomes Cancer. 13:1995;186-191.
36. Yaremko M. L., Kutza C., Lyzak J., Mick R., Recant W. M., Westbrook C. A. Loss of heterozygosity from the short arm of chromosome 8 is associated with invasive behavior in breast cancer. Genes Chromosomes Cancer. 16:1996;189-195.
37. Yokota T., Toshimoto M., Akiyama F., Sakamoto G., Kasumi F., Nakamura Y., Emi M. Localization of a tumor suppressor gene associated with the progression of human breast carcinoma within a 1-cM interval of 8p22-p23.1. Cancer. 85:1999;447-452.