메뉴 건너뛰기




Volumn 133, Issue 3, 2003, Pages 1397-1406

SAGE Analysis of Transcriptome Responses in Arabidopsis Roots Exposed to 2,4,6-Trinitrotoluene

Author keywords

[No Author keywords available]

Indexed keywords

GENES; METABOLISM; OXIDATION; SEED;

EID: 0345392616     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.103.028019     Document Type: Article
Times cited : (99)

References (46)
  • 1
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815
    • (2000) Nature , vol.408 , pp. 796-815
  • 2
    • 0037092062 scopus 로고    scopus 로고
    • Purification and characterization of benzoate: Coenzyme A ligase from Clarkia breweri
    • Beuerle T, Pichersky E (2002) Purification and characterization of benzoate: coenzyme A ligase from Clarkia breweri. Arch Biochem Biophys 400: 258-264
    • (2002) Arch Biochem Biophys , vol.400 , pp. 258-264
    • Beuerle, T.1    Pichersky, E.2
  • 3
    • 0033081882 scopus 로고    scopus 로고
    • Confirmation of conjugation processes during TNT metabolism by axenic plant roots
    • Bhadra R, Wayment DG, Hughes JB, Shanks JV (1999a) Confirmation of conjugation processes during TNT metabolism by axenic plant roots. Environ Sci Technol 33: 446-452
    • (1999) Environ Sci Technol , vol.33 , pp. 446-452
    • Bhadra, R.1    Wayment, D.G.2    Hughes, J.B.3    Shanks, J.V.4
  • 4
    • 0033213997 scopus 로고    scopus 로고
    • Characterization of oxidation products of TNT metabolism in aquatic phytoremediation systems of Myriophyllum aquaticum
    • Bhadra R, Wayment DG, Hughes JB, Shanks JV (1999b) Characterization of oxidation products of TNT metabolism in aquatic phytoremediation systems of Myriophyllum aquaticum. Environ Sci Technol 33: 3354-3361
    • (1999) Environ Sci Technol , vol.33 , pp. 3354-3361
    • Bhadra, R.1    Wayment, D.G.2    Hughes, J.B.3    Shanks, J.V.4
  • 6
    • 51249169259 scopus 로고
    • A simple and efficient method for isolating RNA from pine trees
    • Chang S, Puryear J, Cairney J (1993) A simple and efficient method for isolating RNA from pine trees. Plant Mol Biol Rep 11: 113-116
    • (1993) Plant Mol Biol Rep , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 7
    • 0032709585 scopus 로고    scopus 로고
    • Herbicide safeners: A review
    • Davies J, Caseley JC (1999) Herbicide safeners: a review. Pestic Sci 55: 1043-1058
    • (1999) Pestic Sci , vol.55 , pp. 1043-1058
    • Davies, J.1    Caseley, J.C.2
  • 9
    • 0032937445 scopus 로고    scopus 로고
    • Biodegradation of explosives by transgenic plants expressing pentaerythritol tetranitrate reductase
    • French CE, Rosser SJ, Davies GJ, Nicklin S, Bruce NC (1999) Biodegradation of explosives by transgenic plants expressing pentaerythritol tetranitrate reductase. Nat Biotechnol 17: 491-494
    • (1999) Nat Biotechnol , vol.17 , pp. 491-494
    • French, C.E.1    Rosser, S.J.2    Davies, G.J.3    Nicklin, S.4    Bruce, N.C.5
  • 12
    • 0026459859 scopus 로고
    • The ATP-dependent glutathione S-conjugate export pump
    • Ishikawa T (1992) The ATP-dependent glutathione S-conjugate export pump. Trends Biochem Sci 17: 433-438
    • (1992) Trends Biochem Sci , vol.17 , pp. 433-438
    • Ishikawa, T.1
  • 13
    • 0030747386 scopus 로고    scopus 로고
    • The GS-X pump in plant, yeast, and animal cells: Structure, function, and gene expression
    • Ishikawa T, Li Z-S, Lu Y-P, Rea PA (1997) The GS-X pump in plant, yeast, and animal cells: structure, function, and gene expression. Biosci Rep 17: 189-207
    • (1997) Biosci Rep , vol.17 , pp. 189-207
    • Ishikawa, T.1    Li, Z.-S.2    Lu, Y.-P.3    Rea, P.A.4
  • 15
    • 0001576095 scopus 로고
    • Metabolism of aryloxyphenoxypropanoate herbicide, CGA 184927, in wheat, barley and maize: Differential effects of the safener CGA 185072
    • Kreuz K, Gaudin J, Stingelin J, Ebert E (1991) Metabolism of aryloxyphenoxypropanoate herbicide, CGA 184927, in wheat, barley and maize: differential effects of the safener CGA 185072. Z Naturforsch 46: 901-905
    • (1991) Z Naturforsch , vol.46 , pp. 901-905
    • Kreuz, K.1    Gaudin, J.2    Stingelin, J.3    Ebert, E.4
  • 16
    • 7544246315 scopus 로고    scopus 로고
    • Old enzymes for a new job: Herbicide detoxification in plants
    • Kreuz K, Tommasini R, Martinoia E (1996) Old enzymes for a new job: herbicide detoxification in plants. Plant Physiol 111: 349-353
    • (1996) Plant Physiol , vol.111 , pp. 349-353
    • Kreuz, K.1    Tommasini, R.2    Martinoia, E.3
  • 17
    • 0029140389 scopus 로고
    • Magnesium adenosine 5′-triphosphate-energized transport of glutathione-S-conjugates by plant vacuolar membrane vesicles
    • Li Z-S, Zhao Y, Rea PA (1995) Magnesium adenosine 5′-triphosphate- energized transport of glutathione-S-conjugates by plant vacuolar membrane vesicles. Plant Physiol 107: 1257-1268
    • (1995) Plant Physiol , vol.107 , pp. 1257-1268
    • Li, Z.-S.1    Zhao, Y.2    Rea, P.A.3
  • 18
    • 0036000101 scopus 로고    scopus 로고
    • SAGE profiling and demonstration of differential gene expression along the axial developmental gradient of lignifying xylem in loblolly pine (Pinus taeda)
    • Lorenz WW, Dean JFD (2002) SAGE profiling and demonstration of differential gene expression along the axial developmental gradient of lignifying xylem in loblolly pine (Pinus taeda). Tree Physiol 22: 301-310
    • (2002) Tree Physiol , vol.22 , pp. 301-310
    • Lorenz, W.W.1    Dean, J.F.D.2
  • 20
    • 0035198739 scopus 로고    scopus 로고
    • Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs
    • MacIntosh GC, Wilkerson C, Green PJ (2001) Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs. Plant Physiol 127: 765-776
    • (2001) Plant Physiol , vol.127 , pp. 765-776
    • MacIntosh, G.C.1    Wilkerson, C.2    Green, P.J.3
  • 21
    • 0030823821 scopus 로고    scopus 로고
    • SAGE transcript profiles for p53-dependent growth regulation
    • Madden S, Galella E, Zhu J, Bertelsen A, Beaudry G (1997) SAGE transcript profiles for p53-dependent growth regulation. Oncogene 15: 1079-1085
    • (1997) Oncogene , vol.15 , pp. 1079-1085
    • Madden, S.1    Galella, E.2    Zhu, J.3    Bertelsen, A.4    Beaudry, G.5
  • 22
    • 0027210070 scopus 로고
    • ATP-dependent glutathione S-conjugate export pump in the vacuolar membrane of plants
    • Martinoia E, Grill E, Tommasini R, Kreuz K, Amrhein M (1993) ATP-dependent glutathione S-conjugate export pump in the vacuolar membrane of plants. Nature 364: 247-249
    • (1993) Nature , vol.364 , pp. 247-249
    • Martinoia, E.1    Grill, E.2    Tommasini, R.3    Kreuz, K.4    Amrhein, M.5
  • 23
    • 0033375845 scopus 로고    scopus 로고
    • Technical advance: Transcript profiling in rice (Oryza sativa L.) seedlings using serial analysis of gene expression
    • Matsumura H, Nirasawa S, Terauchi R (1999) Technical advance: transcript profiling in rice (Oryza sativa L.) seedlings using serial analysis of gene expression. Plant J 20: 719-726
    • (1999) Plant J , vol.20 , pp. 719-726
    • Matsumura, H.1    Nirasawa, S.2    Terauchi, R.3
  • 24
    • 0036754222 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae and Arabidopsis thaliana: Useful model systems for the identification of molecular mechanisms involved in resistance of plants to toxins
    • Mitterbauer R, Adam G (2002) Saccharomyces cerevisiae and Arabidopsis thaliana: useful model systems for the identification of molecular mechanisms involved in resistance of plants to toxins. Eur J Plant Pathol 108: 699-703
    • (2002) Eur J Plant Pathol , vol.108 , pp. 699-703
    • Mitterbauer, R.1    Adam, G.2
  • 25
    • 0033067345 scopus 로고    scopus 로고
    • Isolation and characterization of cDNA clones corresponding with mRNAs that accumulate during auxin-induced lateral root formation
    • Neuteboom LW, Ng JMY, Kuyper M, Clijdesdale OR, Hooykaas PJJ, van der Zaal BJ (1999) Isolation and characterization of cDNA clones corresponding with mRNAs that accumulate during auxin-induced lateral root formation. Plant Mol Biol 39: 273-287
    • (1999) Plant Mol Biol , vol.39 , pp. 273-287
    • Neuteboom, L.W.1    Ng, J.M.Y.2    Kuyper, M.3    Clijdesdale, O.R.4    Hooykaas, P.J.J.5    Van Der Zaal, B.J.6
  • 26
    • 0033866508 scopus 로고    scopus 로고
    • Intron-exon organization and phylogeny in a large superfamily, the paralogous cytochrome P450 genes of Arabidopsis thaliana
    • Paquette SM, Bak S, Feyereisen R (2000) Intron-exon organization and phylogeny in a large superfamily, the paralogous cytochrome P450 genes of Arabidopsis thaliana. DNA Cell Biol 19: 307-317
    • (2000) DNA Cell Biol , vol.19 , pp. 307-317
    • Paquette, S.M.1    Bak, S.2    Feyereisen, R.3
  • 27
    • 0035171634 scopus 로고    scopus 로고
    • Serial analysis of gene expression in Plasmodium falciparum reveals the global expression profile of erythrocytic stages and the presence of anti-sense transcripts in the malarial parasite
    • Patankar S, Munasinghe A, Shoaibi A, Cummings LM, Wirth DF (2001) Serial analysis of gene expression in Plasmodium falciparum reveals the global expression profile of erythrocytic stages and the presence of anti-sense transcripts in the malarial parasite. Mol Biol Cell 12: 3114-3125
    • (2001) Mol Biol Cell , vol.12 , pp. 3114-3125
    • Patankar, S.1    Munasinghe, A.2    Shoaibi, A.3    Cummings, L.M.4    Wirth, D.F.5
  • 28
    • 0033000137 scopus 로고    scopus 로고
    • Biotransformation of 2,4,6-trinitrotoluene in Anabaena sp. cultures
    • Pavlostathis SG, Jackson GH (1999) Biotransformation of 2,4,6-trinitrotoluene in Anabaena sp. cultures. Environ Toxicol Chem 18: 412-419
    • (1999) Environ Toxicol Chem , vol.18 , pp. 412-419
    • Pavlostathis, S.G.1    Jackson, G.H.2
  • 29
    • 0033137039 scopus 로고    scopus 로고
    • Diverse range of gene activity during Arabidopsis thaliana leaf senescence includes pathogen-independent induction of defense-related genes
    • Quirino BF, Normanly J, Amasino RM (1999) Diverse range of gene activity during Arabidopsis thaliana leaf senescence includes pathogen-independent induction of defense-related genes. Plant Mol Biol 40: 267-278
    • (1999) Plant Mol Biol , vol.40 , pp. 267-278
    • Quirino, B.F.1    Normanly, J.2    Amasino, R.M.3
  • 30
    • 0001483359 scopus 로고
    • pEARLI 1 (accession no. L43080): An Arabidopsis member of a conserved gene family (PGR95-099)
    • Richards KD, Gardner RC (1995) pEARLI 1 (accession no. L43080): an Arabidopsis member of a conserved gene family (PGR95-099). Plant Physiol 109: 1497
    • (1995) Plant Physiol , vol.109 , pp. 1497
    • Richards, K.D.1    Gardner, R.C.2
  • 31
    • 0035054441 scopus 로고    scopus 로고
    • Genome and genetic resources from the Cancer Genome Anatomy Project
    • Riggins GJ, Strausberg RL (2001) Genome and genetic resources from the Cancer Genome Anatomy Project. Hum Mol Genet 10: 663-667
    • (2001) Hum Mol Genet , vol.10 , pp. 663-667
    • Riggins, G.J.1    Strausberg, R.L.2
  • 32
    • 0030869796 scopus 로고    scopus 로고
    • Molecular cloning and characterization of 12-oxophytodienoate reductase, an enzyme of the octadecanoid signaling pathway from Arabidopsis thaliana: Structural and functional relationship to yeast old yellow enzyme
    • Schaller F, Weiler EW (1997) Molecular cloning and characterization of 12-oxophytodienoate reductase, an enzyme of the octadecanoid signaling pathway from Arabidopsis thaliana: structural and functional relationship to yeast old yellow enzyme. J Biol Chem 272: 28066-28072
    • (1997) J Biol Chem , vol.272 , pp. 28066-28072
    • Schaller, F.1    Weiler, E.W.2
  • 33
    • 0036447501 scopus 로고    scopus 로고
    • Conjugating enzymes involved in xenobiotic metabolism of organic xenobiotics in plants
    • Schröder P, Collins C (2002) Conjugating enzymes involved in xenobiotic metabolism of organic xenobiotics in plants. Intl J Phytoremed 4: 247-265
    • (2002) Intl J Phytoremed , vol.4 , pp. 247-265
    • Schröder, P.1    Collins, C.2
  • 36
    • 0344065377 scopus 로고    scopus 로고
    • A novel promoter from soybean that is active in a complex developmental pattern with and without its proximal 650 base pairs
    • Stromvik MV, Sundararaman VP, Vodkin LO (1999) A novel promoter from soybean that is active in a complex developmental pattern with and without its proximal 650 base pairs. Plant Mol Biol 41: 217-231
    • (1999) Plant Mol Biol , vol.41 , pp. 217-231
    • Stromvik, M.V.1    Sundararaman, V.P.2    Vodkin, L.O.3
  • 37
    • 0033794748 scopus 로고    scopus 로고
    • The sense of naturally transcribed antisense RNAs in plants
    • Terryn N, Rouzé P (2000) The sense of naturally transcribed antisense RNAs in plants. Trends Plant Sci 5: 394-396
    • (2000) Trends Plant Sci , vol.5 , pp. 394-396
    • Terryn, N.1    Rouzé, P.2
  • 39
    • 0031567607 scopus 로고    scopus 로고
    • Differential expression of genes coding for ABC transporters after treatment of Arabidopsis thaliana with xenobiotics
    • Tommasini R, Vogt E, Schmid J, Fromentau M, Amrhein N, Martinoia E (1997) Differential expression of genes coding for ABC transporters after treatment of Arabidopsis thaliana with xenobiotics. FEBS Lett 411: 206-210
    • (1997) FEBS Lett , vol.411 , pp. 206-210
    • Tommasini, R.1    Vogt, E.2    Schmid, J.3    Fromentau, M.4    Amrhein, N.5    Martinoia, E.6
  • 40
    • 0035999373 scopus 로고    scopus 로고
    • Spreading of RNA targeting and DNA methylation in RNA silencing requires transcription of the target gene and a putative RNA-dependent RNA polymerase
    • Vaistij FE, Jones L, Baulcombe DC (2002) Spreading of RNA targeting and DNA methylation in RNA silencing requires transcription of the target gene and a putative RNA-dependent RNA polymerase. Plant Cell 14: 857-867
    • (2002) Plant Cell , vol.14 , pp. 857-867
    • Vaistij, F.E.1    Jones, L.2    Baulcombe, D.C.3
  • 45
    • 0031444524 scopus 로고    scopus 로고
    • Characterization and heterologous expression of hydroxycinnamoyl/benzoyl- CoA:anthranilate N-hydroxycinnamoyl/benzoyltransferase from elicited cell cultures of carnation, Dianthus caryophyllus L.
    • Yang O, Reinhard K, Schiltz E, Matern U (1997) Characterization and heterologous expression of hydroxycinnamoyl/benzoyl-CoA:anthranilate N-hydroxycinnamoyl/benzoyltransferase from elicited cell cultures of carnation, Dianthus caryophyllus L. Plant Mol Biol 35: 777-789
    • (1997) Plant Mol Biol , vol.35 , pp. 777-789
    • Yang, O.1    Reinhard, K.2    Schiltz, E.3    Matern, U.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.