The photon counting histogram in fluorescence fluctuation spectroscopy

Biophysical Journal

Volumn 77, Issue 1, 1999, Pages 553-567

  Chen, Yan ^a   Müller, Joachim D ^a   So, Peter T C ^b   Gratton, Enrico ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^b Massachusetts Institute of Technology Cambridge   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DIFFUSION; FLUORESCENCE SPECTROSCOPY; HISTOGRAM; MOLECULAR DYNAMICS; PHOTON;

EID: 0344603641     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(99)76912-2     Document Type: Article

References (51)

1. Aragon, S. R., and R. Pecora. 1975. Fluorescence correlation spectroscopy and Brownian rotational diffusion. Biopolymers. 14:119-137.
2. Bendat, J. S., and A. G. Piersol. 1971. Random Data: Analysis and Measurement Procedures. Wiley-Interscience, New York.
3. Berland, K. M., P. T. C. So, Y. Chen, W. W. Mantulin, and E. Gratton. 1996. Scanning two-photon fluctuation correlation spectroscopy: particle counting measurements for detection of molecular aggregation. Biophys. J. 71:410-420.
4. Berland, K. M., P. T. C. So, and E. Gratton. 1995. Two-photon fluorescence correlation spectroscopy: method and application to the intracellular environment. Biophys. J. 68:694-701.
5. Bertolotti, M. 1973. Photon statistics. In Photon Correlation and Light Beating Spectroscopy. H. Z. Cummins and E. R. Pike, editors. Plenum Press, New York. 41-74.
6. Borejdo, J. 1979. Motion of myosin fragments during actin-activated ATPase: fluorescence correlation spectroscopy study. Biopolymers. 18: 2807-2820.
7. Braun, H. A., H. Wissing, K. Schafer, and M. C. Hirsch. 1994. Oscillation and noise determine signal transduction in shark multimodal sensory cells. Nature. 367:270-273.
8. Chandrasekhar, S. 1943. Stochastic problems in physics and astronomy. Rev. Mod. Phys. 15:1-89.
9. Ehrenberg, M., and R. Rigler. 1974. Rotational Brownian motion and fluorescence intensity fluctuations. Chem. Phys. 4:390-401.
10. Eigen, M., and R. Rigler. 1994. Sorting single molecules: application to diagnostics and evolutionary biotechnology. Proc. Natl. Acad. Sci. USA. 91:5740-5747.
11. Elson, E. L., and D. Magde. 1974. Fluorescence correlation spectroscopy. I. Conceptual basis and theory. Biopolymers. 13:1-27.
12. Feller, W. 1957. An Introduction to Probability Theory and Its Applications. John Wiley and Sons, New York.
13. Glauber, R. J. 1966. In Physics of Quantum Electronics. P. L. Kelley, B. Lax, and P. E. Tannenwald, editors. McGraw-Hill, New York. 788.
14. Kask, P., P. Piksarv, M. Pooga, and Ü. Mets. 1989. Separation of the rotational contribution in fluorescence correlation experiments. Biophys. J. 55:213-220.
15. Kimble, H. J., M. Dagenais, and L. Mandel. 1977. Photon antibunching in resonance fluorescence. Phys. Rev. Lett. 39:691-695.
16. Kinjo, M., and R. Rigler. 1995. Ultrasensitive hybridization analysis using fluorescence correlation spectroscopy. Nucleic Acids Res. 23: 1795-1799.
17. Koppel, D. E. 1974. Statistical accuracy in fluorescence correlation spectroscopy. Phys. Rev. A. 10:1938-1945.
18. Koppel, D. E., D. Axelrod, J. Schlessinger, E. L. Elson, and W. W. Webb. 1976. Dynamics of fluorescence marker concentration as a probe of mobility. Biophys. J. 16:1315-1329.
19. Koppel, D. E., F. Morgan, A. E. Cowan, and J. H. Carson. 1994. Scanning concentration correlation spectroscopy using the confocal laser microscope. Biophys. J. 66:502-507.
20. Magde, D., E. Elson, and W. W. Webb. 1972. Thermodynamic fluctuations in a reacting system: measurement by fluorescence correlation spectroscopy. Phys. Rev. Lett. 29:705-708.
21. Magde, D., E. L. Elson, and W. W. Webb. 1974. Fluorescence correlation spectroscopy. II. An experimental realization. Biopolymers. 13:29-61.
22. Magde, D., W. W. Webb, and E. L. Elson. 1978. Fluorescence correlation spectroscopy. III. Uniform translation and laminar flow. Biopolymers. 17:361-376.
23. Mandel, L. 1958. Fluctuations of photon beams and their correlations. Proc. Phys. Soc. 72:1037-1048.
24. Mandel, L. 1979. Sub-Poissonian photon statistics in resonance fluorescence. Optics Lett. 4:205-207.
25. Mandel, L., and E. Wolf. 1995. Optical Coherence and Quantum Optics. Cambridge University Press, Cambridge.
26. Palmer, A. G., III, and N. L. Thompson. 1987. Molecular aggregation characterized by high order autocorrelation in fluorescence correlation spectroscopy. Biophys. J. 52:257-270.
27. Palmer, A. G., and N. L. Thompson. 1989a. Fluorescence correlation spectroscopy for detecting submicroscopic clusters of fluorescent molecules in membranes. Chem. Phys. Lipids. 50:253-270.
28. Palmer, A. G. D., and N. L. Thompson. 1989b. High-order fluorescence fluctuation analysis of model protein clusters. Proc. Natl. Acad. Sci. USA. 86:6148-6152.
29. Qian, H. 1990. Inverse poisson transformation and shot noise filtering. Rev. Sci. Instrum. 61:2088-2091.
30. Qian, H., and E. L. Elson. 1989. Characterization of the equilibrium distribution of polymer molecular weights by fluorescence distribution spectroscopy (theoretical results). In Applied Polymer Symposia. John Wiley and Sons, New York. 305-314.
31. Qian, H., and E. L. Elson. 1990. Distribution of molecular aggregation by analysis of fluctuation moments. Proc. Natl. Acad. Sci. USA. 87: 5479-5483.
32. Qian, H., and E. L. Elson. 1991. Analysis of confocal laser-microscope optics for 3-D fluorescence correlation spectroscopy. Appl. Opt. 30: 1185-1195.
33. Rabin, M. W., R. D. Merithew, M. B. Weissman, M. J. Higgins, and S. Bhattacharya. 1998. Noise probes of underlying static correlation lengths in the superconducting peak effect. Phys. Rev. B. 57:720-723.
34. Rauer, B., E. Neumann, J. Widengren, and R. Rigler. 1996. Fluorescence correlation spectrometry of the interaction kinetics of tetramethylrhodarnin alpha-bungarotoxin with Torpedo californica acetylcholine receptor. Biophys. Chem. 58:3-12.
35. Rigler, R., Ü. Mets, J. Widengren, and P. Kask. 1993a. Fluorescence correlation spectroscopy with high count rate and low background: analysis of translational diffusion. Eur. Biophys. J. 22:169-175.
36. Rigler, R., J. Widengren, and Ü. Mets. 1993b. Interactions and kinetics of single molecules as observed by fluorescence correlation spectroscopy. In Fluorescence Spectroscopy: New Methods and Applications. O. S. Wolfbeis, editor. Springer-Verlag, Berlin. 13-24.
37. Saleh, B. 1978. Photoelectron Statistics, with Applications to Spectroscopy and Optical Communications. Springer-Verlag, Berlin.
38. Schwille, P., F. J. Meyer-Almes, and R. Rigler. 1997. Dual-color fluorescence cross-correlation spectroscopy for multicomponent diffusional analysis in solution. Biophys. J. 72:1878-1886.
39. Schwille, P., F. Oehlenschlager, and N. G. Walter. 1996. Quantitative hybridization kinetics of DNA probes to RNA in solution followed by diffusional fluorescence correlation analysis. Biochemistry. 35: 10182-10193.
40. Short, R., and L. Mandel. 1983. Observation of sub-Poissonian photon statistics. Phys. Rev. Lett. 51:384-387.
41. Siedentopf, H., and R. Zsigmondy. 1903. Über die Sichtbarmachung und Grössenbestimmung ultramikroskopischer Teilchen, mit besonderer Anwendung auf Goldrubingläser. Ann. Phys. [4]. 10:1-39.
42. Snyder, D. L. 1975. Random Point Processes. Wiley-Interscience, New York.
43. Teich, M. C., and B. E. A. Saleh. 1988. Photon bunching and antibunching. In Progress in Optics. E. Wolf, editor. North-Holland Publishing Company, Amsterdam. 1-104.
44. Thompson, N. L. 1991. Fluorescence correlation spectroscopy. In Topics in Fluorescence Spectroscopy. J. R. Lakowicz, editor. Plenum, New York. 337-378.
45. Thompson, N. L., and D. Axelrod. 1983. Immunoglobulin surface-binding kinetics studied by total internal reflection with fluorescence correlation spectroscopy. Biophys. J. 43:103-114.
46. van Kampen, N. G. 1981, Stochastic Processes in Physics and Chemistry. Elsevier North-Holland, New York.
47. Walls, D. F. 1983. Squeezed states of light. Nature. 306:141-146.
48. Weissman, M. B. 1981. Fluctuation spectroscopy. Annu. Rev. Phys. Chem. 32:205-232.
49. Weissman, M. B. 1988. 1/f noise and other slow, nonexponential kinetics in condensed matter. Rev. Mod. Phys. 60:537-571.
50. Weissman, M. B. 1993. What is a spin glass? A glimpse via mesoscopic noise. Rev. Mod. Phys. 65:829-839.
51. Widengren, J., Ü. Mets, and R. Rigler 1995. Fluorescence correlation spectroscopy of triplet states in solution - a theoretical and experimental study. J. Phys. Chem. 99:13368-13379.