메뉴 건너뛰기




Volumn 38, Issue 3, 2003, Pages 298-309

Congruent evidence from α-tubulin and β-tubulin gene phylogenies for a zygomycete origin of microsporidia

Author keywords

Chytrid; Evolution; Microsporidia; Phylogeny; Tubulin; Zygomycete

Indexed keywords

ALPHA TUBULIN; BETA TUBULIN;

EID: 0037384263     PISSN: 10871845     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1087-1845(02)00537-6     Document Type: Article
Times cited : (181)

References (44)
  • 1
    • 0031149809 scopus 로고    scopus 로고
    • Phylogenetic position of Amblyospora Hazard & Oldacre (Microspora: Amblyosporidae) based on small subunit rRNA data and its implication for the evolution of the microsporidia
    • Baker M.D., Vossbrinck C.R., Becnel J.J., Maddox J.V. Phylogenetic position of Amblyospora Hazard & Oldacre (Microspora: Amblyosporidae) based on small subunit rRNA data and its implication for the evolution of the microsporidia. J. Eukaryot. Microbiol. 44:1997;220-225.
    • (1997) J. Eukaryot. Microbiol. , vol.44 , pp. 220-225
    • Baker, M.D.1    Vossbrinck, C.R.2    Becnel, J.J.3    Maddox, J.V.4
  • 2
    • 0029360652 scopus 로고
    • Small subunit ribosomal DNA phylogeny of various microsporidia with emphasis on AIDS related forms
    • Baker M.D., Vossbrinck C.R., Didier E.S., Maddox J.V., Shadduck J.A. Small subunit ribosomal DNA phylogeny of various microsporidia with emphasis on AIDS related forms. J. Eukaryot. Microbiol. 42:1995;564-570.
    • (1995) J. Eukaryot. Microbiol. , vol.42 , pp. 564-570
    • Baker, M.D.1    Vossbrinck, C.R.2    Didier, E.S.3    Maddox, J.V.4    Shadduck, J.A.5
  • 3
    • 0034602344 scopus 로고    scopus 로고
    • A kingdom-level phylogeny of eukaryotes based on combined protein data
    • Baldauf S.L., Roger A.J., Wenk-Siefert I., Doolittle W.F. A kingdom-level phylogeny of eukaryotes based on combined protein data. Science. 290:2000;972-977.
    • (2000) Science , vol.290 , pp. 972-977
    • Baldauf, S.L.1    Roger, A.J.2    Wenk-Siefert, I.3    Doolittle, W.F.4
  • 4
    • 0034975136 scopus 로고    scopus 로고
    • Phylogenetic relationships among microsporidia based on rDNA sequence data, with particular reference to fish-infecting Microsporidium Balbiani 1884 species
    • Bell A.S., Aoki T., Yokoyama H. Phylogenetic relationships among microsporidia based on rDNA sequence data, with particular reference to fish-infecting Microsporidium Balbiani 1884 species. J. Eukaryot. Microbiol. 48:2001;258-265.
    • (2001) J. Eukaryot. Microbiol. , vol.48 , pp. 258-265
    • Bell, A.S.1    Aoki, T.2    Yokoyama, H.3
  • 5
    • 0028941917 scopus 로고
    • Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications
    • Brown J.R., Doolittle W.F. Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications. Proc. Natl. Acad. Sci. USA. 92:1995;2441-2445.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 2441-2445
    • Brown, J.R.1    Doolittle, W.F.2
  • 6
    • 0033984609 scopus 로고    scopus 로고
    • Weighted neighbor joining: A likelihood-based approach to distance-based phylogeny reconstruction
    • Bruno W.J., Socci N.D., Halpern A.L. Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction. Mol. Biol. Evol. 17:2000;189-197.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 189-197
    • Bruno, W.J.1    Socci, N.D.2    Halpern, A.L.3
  • 8
    • 0001107487 scopus 로고
    • A 6-kingdom classification and a unified phylogeny
    • H.E.A. Schenk, & W.S. Schwemmler. Berlin: Walter de Gruyter & Co
    • Cavalier-Smith T. A 6-kingdom classification and a unified phylogeny. Schenk H.E.A., Schwemmler W.S. Endocytobiology II: Intracellular space as oligogenetic. 1983;1027-1034 Walter de Gruyter & Co, Berlin.
    • (1983) Endocytobiology II: Intracellular space as oligogenetic , pp. 1027-1034
    • Cavalier-Smith, T.1
  • 9
    • 0027145102 scopus 로고
    • Kingdom protozoa and its 18 phyla
    • Cavalier-Smith T. Kingdom protozoa and its 18 phyla. Microbiol. Rev. 57:1993;953-994.
    • (1993) Microbiol. Rev. , vol.57 , pp. 953-994
    • Cavalier-Smith, T.1
  • 10
    • 0031663016 scopus 로고    scopus 로고
    • A revised six-kingdom system of life
    • Cavalier-Smith T. A revised six-kingdom system of life. Biol. Rev. 73:1998;203-266.
    • (1998) Biol. Rev. , vol.73 , pp. 203-266
    • Cavalier-Smith, T.1
  • 11
    • 0035127316 scopus 로고    scopus 로고
    • Relationships of microsporidian genera, with emphasis on the polysporous genera, revealed by sequences of the largest subunit of RNA polymerase II (RPB1)
    • Cheney S.A., Lafranchi-Tristem N.J., Bourges D., Canning E.U. Relationships of microsporidian genera, with emphasis on the polysporous genera, revealed by sequences of the largest subunit of RNA polymerase II (RPB1). J. Eukaryot. Microbiol. 48:2001;111-117.
    • (2001) J. Eukaryot. Microbiol. , vol.48 , pp. 111-117
    • Cheney, S.A.1    Lafranchi-Tristem, N.J.2    Bourges, D.3    Canning, E.U.4
  • 13
    • 0034799296 scopus 로고    scopus 로고
    • α and β subunits of pyruvate dehydrogenase E1 from the microsporidian Nosema locustae: Mitochondrion-derived carbon metabolism in microsporidia
    • Fast N.M., Keeling P.J. α and β subunits of pyruvate dehydrogenase E1 from the microsporidian Nosema locustae: mitochondrion-derived carbon metabolism in microsporidia. Mol. Biochem. Parasitol. 117:2001;201-209.
    • (2001) Mol. Biochem. Parasitol. , vol.117 , pp. 201-209
    • Fast, N.M.1    Keeling, P.J.2
  • 14
    • 0032823290 scopus 로고    scopus 로고
    • Phylogenetic analysis of the TATA box binding protein (TBP) gene from Nosema locustae: Evidence for a microsporidia-fungi relationship and spliceosomal intron loss
    • Fast N.M., Logsdon J.M. Jr., Doolittle W.F. Phylogenetic analysis of the TATA box binding protein (TBP) gene from Nosema locustae: evidence for a microsporidia-fungi relationship and spliceosomal intron loss. Mol. Biol. Evol. 16:1999;1415-1419.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1415-1419
    • Fast, N.M.1    Logsdon J.M., Jr.2    Doolittle, W.F.3
  • 16
    • 0029798510 scopus 로고    scopus 로고
    • The miniaturized nuclear genome of eukaryotic endosymbiont contains genes that overlap, genes that are cotranscribed, and the smallest known spliceosomal introns
    • Gilson P.R., McFadden G.I. The miniaturized nuclear genome of eukaryotic endosymbiont contains genes that overlap, genes that are cotranscribed, and the smallest known spliceosomal introns. Proc. Natl. Acad. Sci. USA. 93:1996;7737-7742.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 7737-7742
    • Gilson, P.R.1    McFadden, G.I.2
  • 19
    • 0034120954 scopus 로고    scopus 로고
    • Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics
    • James T.Y., Porter D., Leander C.A., Vilgalys R., Longcore J.E. Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics. Can. J. Bot. 78:2000;336-350.
    • (2000) Can. J. Bot. , vol.78 , pp. 336-350
    • James, T.Y.1    Porter, D.2    Leander, C.A.3    Vilgalys, R.4    Longcore, J.E.5
  • 20
    • 0030474879 scopus 로고    scopus 로고
    • Complete nucleotide sequences of the genes encoding translation elongation factors 1α and 2 from a microsporidian parasite, Glugea plecoglossi: Implications for the deepest branching of eukaryotes
    • Kamaishi T., Hashimoto T., Nakamura Y., Masuda Y., Nakamura F., Okamoto K., Shimizu M., Hasegawa M. Complete nucleotide sequences of the genes encoding translation elongation factors 1α and 2 from a microsporidian parasite, Glugea plecoglossi: implications for the deepest branching of eukaryotes. J. Biochem. (Tokyo). 120:1996;1095-1103.
    • (1996) J. Biochem. (Tokyo) , vol.120 , pp. 1095-1103
    • Kamaishi, T.1    Hashimoto, T.2    Nakamura, Y.3    Masuda, Y.4    Nakamura, F.5    Okamoto, K.6    Shimizu, M.7    Hasegawa, M.8
  • 22
    • 0029908930 scopus 로고    scopus 로고
    • α-Tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family
    • Keeling P.J., Doolittle W.F. α-Tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family. Mol. Biol. Evol. 13:1996;1297-1305.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 1297-1305
    • Keeling, P.J.1    Doolittle, W.F.2
  • 23
    • 0036406924 scopus 로고    scopus 로고
    • Microsporidia: Biology and evolution of highly reduced intracellular parasites
    • Keeling P.J., Fast N.M. Microsporidia: biology and evolution of highly reduced intracellular parasites. Annu. Rev. Microbiol. 56:2002;93-116.
    • (2002) Annu. Rev. Microbiol. , vol.56 , pp. 93-116
    • Keeling, P.J.1    Fast, N.M.2
  • 24
    • 0033977617 scopus 로고    scopus 로고
    • Evidence from β-tubulin phylogeny that microsporidia evolved from within the fungi
    • Keeling P.J., Luker M.A., Palmer J.D. Evidence from β-tubulin phylogeny that microsporidia evolved from within the fungi. Mol. Biol. Evol. 17:2000;23-31.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 23-31
    • Keeling, P.J.1    Luker, M.A.2    Palmer, J.D.3
  • 26
    • 0001835136 scopus 로고    scopus 로고
    • The structure, function, and composition of the microsporidian polar tube
    • M. Wittner, & L.M. Weiss. Washington: ASM Press
    • Keohane E.M., Weiss L.M. The structure, function, and composition of the microsporidian polar tube. Wittner M., Weiss L.M. The Microsporidia and Microsporidiosis. 1999;196-224 ASM Press, Washington.
    • (1999) The Microsporidia and Microsporidiosis , pp. 196-224
    • Keohane, E.M.1    Weiss, L.M.2
  • 27
    • 0028177080 scopus 로고
    • A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates
    • Kuhner M.K., Felsenstein J. A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates. Mol. Biol. Evol. 11:1994;459-468.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 459-468
    • Kuhner, M.K.1    Felsenstein, J.2
  • 28
    • 84963082145 scopus 로고
    • A proposal to the classification within the subphylum Cnidospora
    • Lom J., Vávra J. A proposal to the classification within the subphylum Cnidospora. Syst. Zool. 11:1962;172-175.
    • (1962) Syst. Zool. , vol.11 , pp. 172-175
    • Lom, J.1    Vávra, J.2
  • 29
    • 0034952316 scopus 로고    scopus 로고
    • RDNA phylogeny of Intrapredatorus barri (Microsporida: Amblyosporidae) parasitic to Culex fuscanus Wiedemann (Diptera: Culicidae)
    • Nilsen F., Chen W.-J. rDNA phylogeny of Intrapredatorus barri (Microsporida: Amblyosporidae) parasitic to Culex fuscanus Wiedemann (Diptera: Culicidae). Parasitology. 122:2001;617-623.
    • (2001) Parasitology , vol.122 , pp. 617-623
    • Nilsen, F.1    Chen, W.-J.2
  • 30
    • 0031880075 scopus 로고    scopus 로고
    • Phylogenetic relationships among the Harpellales and Kickxellales
    • O'Donnell K., Cigelnik E., Benny G.L. Phylogenetic relationships among the Harpellales and Kickxellales. Mycologia. 90:1998;624-639.
    • (1998) Mycologia , vol.90 , pp. 624-639
    • O'Donnell, K.1    Cigelnik, E.2    Benny, G.L.3
  • 31
    • 0029928715 scopus 로고    scopus 로고
    • The mitochondrial DNA of Allomyces macrogynus: The complete genomic sequence from an ancestral fungus
    • Paquin B., Lang B.F. The mitochondrial DNA of Allomyces macrogynus: the complete genomic sequence from an ancestral fungus. J. Mol. Biol. 255:1996;688-701.
    • (1996) J. Mol. Biol. , vol.255 , pp. 688-701
    • Paquin, B.1    Lang, B.F.2
  • 32
    • 0036623258 scopus 로고    scopus 로고
    • An approximately unbiased test of phylogenetic tree selection
    • Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 51:2002;492-508.
    • (2002) Syst. Biol. , vol.51 , pp. 492-508
    • Shimodaira, H.1
  • 33
    • 0036139287 scopus 로고    scopus 로고
    • CONSEL: For assessing the confidence of phylogenetic tree selection
    • Shimodaira H., Hasegawa M. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics. 17:2001;1246-1247.
    • (2001) Bioinformatics , vol.17 , pp. 1246-1247
    • Shimodaira, H.1    Hasegawa, M.2
  • 35
    • 0029836454 scopus 로고    scopus 로고
    • Quartet puzzling: A quartet maximum-likelihood method for reconstructing tree topologies
    • Strimmer K., von Haeseler A. Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13:1996;964-969.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 964-969
    • Strimmer, K.1    Von Haeseler, A.2
  • 36
    • 0033840028 scopus 로고    scopus 로고
    • Molecular phylogeny of parasitic zygomycota (Dimargaritales, zoopagales) based on nuclear small subunit ribosomal DNA sequences
    • Tanabe Y., O'Donnell K., Saikawa M., Sugiyama J. Molecular phylogeny of parasitic zygomycota (Dimargaritales, zoopagales) based on nuclear small subunit ribosomal DNA sequences. Mol. Phylogenet. Evol. 16:2000;253-262.
    • (2000) Mol. Phylogenet. Evol. , vol.16 , pp. 253-262
    • Tanabe, Y.1    O'Donnell, K.2    Saikawa, M.3    Sugiyama, J.4
  • 37
    • 0034603818 scopus 로고    scopus 로고
    • Microsporidia: Accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungi
    • Van de Peer Y., Ben Ali A., Meyer A. Microsporidia: accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungi. Gene. 246:2000;1-8.
    • (2000) Gene , vol.246 , pp. 1-8
    • Van de Peer, Y.1    Ben Ali, A.2    Meyer, A.3
  • 38
    • 0002010651 scopus 로고    scopus 로고
    • Structure of the microsporidia
    • M. Wittner, & L.M. Weiss. Washington: ASM Press
    • Vávra J., Larsson J.I.R. Structure of the microsporidia. Wittner M., Weiss L.M. The Microsporidia and Microsporidiosis. 1999;7-84 ASM Press, Washington.
    • (1999) The Microsporidia and Microsporidiosis , pp. 7-84
    • Vávra, J.1    Larsson, J.I.R.2
  • 39
    • 0001408032 scopus 로고
    • The microsporidia of the protozoa
    • Vivier E. The microsporidia of the protozoa. Protistol. 11:1975;345-361.
    • (1975) Protistol. , vol.11 , pp. 345-361
    • Vivier, E.1
  • 40
    • 0035972750 scopus 로고    scopus 로고
    • Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes
    • Voigt K., Wostemeyer J. Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes. Gene. 270:2001;113-120.
    • (2001) Gene , vol.270 , pp. 113-120
    • Voigt, K.1    Wostemeyer, J.2
  • 41
    • 10244245404 scopus 로고    scopus 로고
    • Comparative rDNA analysis of microsporidia including AIDS related species
    • Vossbrinck C.R., Baker M.D., Didier E.S. Comparative rDNA analysis of microsporidia including AIDS related species. J. Eukaryot. Microbiol. 43:1996;110S.
    • (1996) J. Eukaryot. Microbiol. , vol.43
    • Vossbrinck, C.R.1    Baker, M.D.2    Didier, E.S.3
  • 43
    • 0022510979 scopus 로고
    • Eukaryotic ribosomes that lack a 5.8S RNA
    • Vossbrinck C.R., Woese C.R. Eukaryotic ribosomes that lack a 5.8S RNA. Nature. 320:1986;287-288.
    • (1986) Nature , vol.320 , pp. 287-288
    • Vossbrinck, C.R.1    Woese, C.R.2
  • 44
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang Z. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:1997;555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.