Susceptibility to recombination rearrangements of a chimeric plum pox potyvirus genome after insertion of a foreign gene

Virus Research

Volumn 57, Issue 2, 1998, Pages 183-195

  Guo, Hui Shan ^a   López Moya, Juan José ^a   García, Juan Antonio ^a  

^a CENTRO NACIONAL DE BIOTECNOLOGÍA   (Spain)

Author keywords

GUS; Potyviridae; RNA recombination; Sharka virus; Viral vector

Indexed keywords

BETA GLUCURONIDASE; RECOMBINANT RNA; VIRUS VECTOR;

ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; GENE REARRANGEMENT; MOSAIC VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT VIRUS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SHARKA VIRUS; VIRUS GENOME;

BASE SEQUENCE; CHIMERA; CHROMOSOME MAPPING; DNA PRIMERS; DNA, VIRAL; GENE EXPRESSION; GENE REARRANGEMENT; GENES, REPORTER; GENETIC ENGINEERING; GENOME, VIRAL; GLUCURONIDASE; MOLECULAR SEQUENCE DATA; PLANTS, TOXIC; PLUM POX VIRUS; RECOMBINATION, GENETIC; SEQUENCE DELETION; TOBACCO;

EID: 0344301991     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-1702(98)00100-2     Document Type: Article

References (47)

1. Atreya C.D., Pirone T.P. Mutational analysis of the helper component-proteinase gene of a potyvirus: Effects of amino acid substitutions, deletions, and gene replacement on virulence and aphid transmissibility. Proc. Natl. Acad. Sci. USA. 90:1993;11919-11923.
2. Atreya C.D., Atreya P.L., Thornbury D.W., Pirone T.P. Site-directed mutations in the potyvirus HC-Pro gene affect helper component activity, virus accumulation, and symptom expression in infected tobacco plants. Virology. 191:1992;106-111.
3. Berger P.H., Hunt A.G., Domier G.M., Hellman G.M., Stram Y., Thornbury D.W., Pirone T.P. Expression in transgenic plants of a viral gene product that mediates insect transmission of potyviruses. Proc. Natl. Acad. Sci. USA. 86:1989;8402-8406.
4. Carrington J.C., Dougherty W.G. Small nuclear inclusion protein encoded by a plant potyvirus genome is a protease. J. Virol. 61:1987;2540-2548.
5. Carrington J.C., Cary S.M., Parks T.D., Dougherty W.G. A second proteinase encoded by a plant potyvirus genome. EMBO J. 8:1989;365-370.
6. Carrington J.C., Freed D.D., Sanders T.C. Autocatalytic processing of the potyvirus helper component proteinase in Escherichia coli and in vitro. J. Virol. 63:1989;4459-4463.
7. Carrington J.C., Haldeman R., Dolja V.V., Restrepo-Hartwig M.A. Internal cleavage and trans-proteolytic activities of the VPg-proteinase (NIa) of tobacco etch potyvirus in vivo. J. Virol. 67:1993;6995-7000.
8. Cronin S., Verchot J., Haldeman-Cahill R., Schaad M.C., Carrington J.C. Long-distance movement factor: A transport function of the potyvirus helper component proteinase. Plant Cell. 7:1995;549-559.
9. Dolja V.V., McBride H.J., Carrington J.C. Tagging of plant potyvirus replication and movement by insertion of β-glucuronidase into the viral polyprotein. Proc. Natl. Acad. Sci. USA. 89:1992;10208-10212.
10. Dolja V.V., Herndon K.L., Pirone T.P., Carrington J.C. Spontaneous mutagenesis of a plant potyvirus genome after insertion of a foreign gene. J. Virol. 67:1993;5968-5975.
11. Dolja V.V., Hong J., Keller K.E., Martin R.R., Peremyslov V.V. Suppression of potyvirus infection by coexpressed closterovirus protein. Virology. 234:1997;243-252.
12. Eggen R., Verver J., Wellink J., Pleij K., van Kammen A., Goldbach R. Analysis of sequences involved in cowpea mosaic virus RNA replication using site-specific mutants. Virology. 173:1989;456-464.
13. Fernández A., Guo H.S., Sáenz P., Simón-Buela L., Gómez de Cedrón M., García J.A. The motif V of plum pox potyvirus CI RNA helicase is involved in NTP hydrolysis and is essential for virus RNA replication. Nucleic Acids Res. 25:1997;4474-4480.
14. García J.A., Riechmann J.L., Laín S. Artificial cleavage site recognized by plum pox potyvirus protease in Escherichia coli. J. Virol. 63:1989;2457-2460.
15. García J.A., Riechmann J.L., Laín S. Proteolytic activity of the plum pox potyvirus NIa-like protein in Escherichia coli. Virology. 170:1989;362-369.
16. García-Arenal F., Palukaitis P., Zaitlin M. Strains and mutants of tobacco mosaic virus are both found in virus derived from single-lesions-passaged inoculum. Virology. 132:1984;131-137.
17. Guo H.S., Cervera M.T., García J.A. Plum pox potyvirus resistance associated to transgene silencing that can be stabilized after different number of plant generations. Gene. 206:1998;263-272.
18. Hellmann G.M., Shaw J.G., Rhoads R.E. In vitro analysis of tobacco vein mottling virus NIa cistron: Evidence for a virus encoded protease. Virology. 163:1988;554-562.
19. Kasschau K.D., Carrington J.C. Requirement for HC-Pro processing during genome amplification of tobacco etch potyvirus. Virology. 209:1995;268-273.
20. Kearney, C.M., Chapman, S.N., Turpen, T.H., Dawson, W.O., 1995. High level gene expression in plants using RNA viruses as transient expression vectors. In: Gelvin, S.B., Schilperoort, R.A. (Eds.), Plant Molecular Biology Manual, 2nd ed. Kluwer Academic Publishers, Dordrecht, pp. L1, 1-16.
21. Lai M.M.C. RNA recombination in animal and plant viruses. Microbiol. Rev. 56:1992;61-79.
22. Li Y., Ball A. Nonhomologous RNA recombination during negative-strand synthesis of flock house virus RNA. J. Virol. 67:1993;3854-3860.
23. Maia I.G., Haenni A.-L., Bernardi F. Potyviral HC-Pro: a multifunctional protein. J. Gen. Virol. 77:1996;1335-1341.
24. Mueller S., Wimmer E. Expression of foreign proteins by poliovirus polyprotein fusion: Analysis of genetic stability reveals rapid deletions and formation of cardioviruslike open reading frames. J. Virol. 72:1998;20-31.
25. Nagy P.D., Bujarski J.J. Efficient system of homologous RNA recombination in brome mosaic virus: sequence and structure requirements and accuracy of crossovers. J. Virol. 69:1995;131-140.
26. Nagy P.D., Bujarski J.J. Engineering of homologous recombination hotspots with AU-rich sequences in brome mosaic virus. J. Virol. 71:1997;3799-3810.
27. Nagy P.D., Simon A.E. New insights into the mechanisms of RNA recombination. Virology. 235:1997;1-9.
28. Nagy P.D., Zhang C.X., Simon A.E. Dissecting RNA recombination in vitro: role of RNA sequences and the viral replicase. EMBO J. 17:1998;2392-2403.
29. Peleman J., Boerjan W., Engler G., Seurinck J., Botterman J., Alliotte T., Van Montagu M., Inzé D. Strong cellular preference in the expression of a housekeeping gene of Arabidopsis thaliana encoding S-adenosylmethionine synthetase. Plant Cell. 1:1989;81-93.
30. Pogany J., Romero J., Huang Q., Sgro J.-Y., Shang H., Bujarski J.J. De novo generation of defective interfering-like RNAs in broad bean mottle bromovirus. Virology. 212:1995;574-586.
31. Porta C., Lomonossoff G.P. Use of viral replicons for the expression of genes in plants. Mol. Biotech. 5:1996;209-221.
32. Pruss G., Ge X., Shi X.M., Carrington J.C., Vance V.B. Plant viral synergism: The potyviral genome encodes a broad-range pathogenicity enhancer that transactivates replication of heterologous viruses. Plant Cell. 9:1997;859-868.
33. Qiao X., Qiao J., Mindich L. An in vitro system for the investigation of heterologous RNA recombination. Virology. 227:1997;103-110.
34. Raffo, A.J., Dawson, W.O., 1991. Construction of tobacco mosaic virus subgenomic replicons that are replicated and spread systemically in tobacco plants. Virology 184, 277-289.
35. Riechmann J.L., Laín S., García J.A. Infectious in vitro transcripts from a plum pox potyvirus cDNA clone. Virology. 177:1990;710-716.
36. Riechmann J.L., Laín S., García J.A. Identification of the initiation codon of plum pox potyvirus genomic RNA. Virology. 185:1991;544-552.
37. Riechmann J.L., Laín S., García J.A. Highlights and prospects of potyvirus molecular biology. J. Gen. Virol. 73:1992;1-16.
38. Rojas M.R., Zerbini F.M., Allison R.F., Gilbertson R.L., Lucas W.J. Capsid protein and helper component proteinase function as potyvirus cell-to-cell movement proteins. Virology. 237:1997;283-295.
39. Schlesinger S. Alphaviruses-vectors for the expression of heterologous genes. Trends Biotechnol. 11:1993;18-22.
40. Scholthof H.B., Scholthof K.-B.G., Jackson A. Plant virus gene vectors for transient expression of foreign proteins in plants. Annu. Rev. Phytopathol. 34:1996;299-323.
41. Shukla, D.D., Ward, C.W., Brunt, A.A., 1994. Genome structure, variation and function. In: Shukla, D.D., Ward, C.W., Brunt, A.A. (Eds.), The Potyviridae. CAB International, Cambridge, pp. 74-112.
42. Simon A.E., Bujarski J.J. RNA-RNA recombination and evolution in virus-infected plants. Annu. Rev. Phytopathol. 32:1994;337-362.
43. Verchot J., Carrington J.C. Evidence that the potyvirus P1 proteinase functions in trans as an accesory factor for genome amplification. J. Virol. 69:1995;3668-3674.
44. Verchot J., Koonin E.V., Carrington J.C. The 35-kDa protein from the N-terminus of a potyviral polyprotein functions as a third virus-encoded proteinase. Virology. 185:1991;527-535.
45. Verchot J., Herndon K.L., Carrington J.C. Mutational analysis of the tobacco etch potyviral 35-kDa proteinase: Identification of essential residues and requirements for autoproteolysis. Virology. 190:1992;298-306.
46. Werle E., Schneider C., Renner M., Völker M., Fiehn W. Convenient single-step, one tube purification of PCR products for direct sequencing. Nucleic Acids Res. 22:1994;4354-4355.
47. White K.A., Morris T.J. RNA determinants of junction site selection in RNA virus determinants and defective interfering RNAs. RNA. 1:1995;1029-1040.