An in vitro system for the investigation of heterologous RNA recombination

Virology

Volumn 227, Issue 1, 1997, Pages 103-110

  Qiao, Xueying ^a   Qiao, Jian ^a   Mindich, Leonard ^a  

^a PUBLIC HEALTH RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RECOMBINANT RNA;

ARTICLE; BACTERIOPHAGE; CONTROLLED STUDY; GENETIC RECOMBINATION; IN VITRO STUDY; NONHUMAN; PRIORITY JOURNAL; VIRUS RECOMBINATION;

RNA VIRUSES;

EID: 0031555651     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1996.8311     Document Type: Article

References (24)

1. Borukhov, S., Sagitov, V., and Goldfarb, A. (1993). Transcript cleavage factors from E. coli. Cell 72, 459-66.
2. Bujarski, J. J., and Dzianott, A. M. (1991). Generation and analysis of nonhomologous RNA-RNA recombinants in brome mosaic virus: Sequence complementarities at crossover sites. J. Virol. 65, 4153-4159.
3. Frilander, M., and Bamford, D. H. (1995). In vitro packaging of the single-stranded RNA genomic precursors of the segmented double-stranded RNA bacteriophage Φ6: The three segments modulate each other's packaging efficiency. J. Mol. Biol. 246, 418-428.
4. Frilander, M., Gottlieb, P., Strassman, J., Bamford, D. H., and Mindich, L. (1992). Dependence of minus strand synthesis upon complete genomic packaging in the dsRNA bacteriophage Φ6. J. Virol. 66, 5013-5017.
5. Frilander, M., Poranen, M., and Bamford, D. H. (1995). The large genome segment of dsRNA bacteriophage Φ6 is the key regulator in the in vitro minus and plus strand synthesis. RNA 1, 510-518.
6. Gottlieb, P., Qiao, X., Strassman, J., Frilander, M., and Mindich, L. (1994). Identification of the packaging regions within the genomic RNA segments of bacteriophage Φ6. Virology 200, 42-47.
7. Gottlieb, P., Strassman, J., Bamford, D. H., and Mindich, L. (1988). Production of a polyhedral particle in E. coli from a cDNA copy of the large genomic segment of bacteriophage Φ6. J. Virol. 62, 181-187.
8. Gottlieb, P., Strassman, J., Qiao, X., Frucht, A., and Mindich, L. (1990). In vitro replication, packaging and transcription of the segmented dsRNA genome of bacteriophage Φ6: Studies with procapsids assembled from plasmid encoded proteins. J. Bacteriol. 172, 5774-5782.
9. Lehman, J. F., and Mindich, L. (1979). The isolation of new mutants of bacteriophage Φ6. Virology 97, 164-170.
10. Mindich, L. (1995). Heterologous recombination in the segmented dsRNA genome of bacteriophage Φ6. Semin. Virol. 6, 75-83.
11. Mindich, L. (1988). Bacteriophage Φ6: A unique virus having a lipid-containing membrane and a genome composed of three dsRNA segments. In "Advances in Virus Research" (K. Maramorosch, F. A. Murphy, and A. J. Shatkin, Eds.), Vol. 35, pp. 137-176, Academic Press, New York.
12. Mindich, L., MacKenzie, G., Strassman, J., McGraw, T., Metzger, S., Romantschuk, M., and Bamford, D. (1985). cDNA cloning of portions of the bacteriophage Φ6 genome. J. Bacteriol. 162, 992-999.
13. Mindich, L., Qiao, X., Onodera, S., Gottlieb, P., and Frilander, M. (1994). RNA structural requirements for stability and minus strand synthesis in the dsRNA bacteriophage Φ6. Virology 202, 258-263.
14. Mindich, L., Qiao, X., Onodera, S., Gottlieb, P., and Strassman, J. (1992). Heterologous recombination in the dsRNA bacteriophage Φ6. J. Virol. 66, 2605-2610.
15. Nagy, P. D., and Bujarski, J. J. (1993). Targeting the site of RNA-RNA recombination in brome mosaic virus with antisense sequences. Proc. Natl. Acad. Sci. USA 90, 6390-6394.
16. Olkkonen, V. M., Gottlieb, P., Strassman, J., Qiao, X., Bamford, D. H., and Mindich, L. (1990). In vitro assembly of infectious nucleocapsids of bacteriophage Φ6: Formation of a recombinant double-stranded RNA virus. Proc. Natl. Acad. Sci. USA 87, 9173-9177.
17. Onodera, S., Qiao, X., Gottlieb, P., Strassman, J., Frilander, M., and Mindich, L. (1993). RNA structure and heterologous recombination in the dsRNA bacteriophage Φ6. J. Virol. 67, 4914-4922.
18. Onodera, S., Qiao, X., Qiao, J., and Mindich, L. (1995). Acquisition of a fourth genomic segment in bacteriophage Φ6: A bacteriophage with a genome of three segments of dsRNA. Virology 212, 204-212.
19. Orlova, M., Newlands, J., Das, A., Goldfarb, A., and Borukhov, S. (1995). Intrinsic transcript cleavage activity of RNA polymerase. Proc. Natl. Acad. Sci. USA 92, 4596-4600.
20. Qiao, X., Casini, G., Qiao, J., and Mindich, L. (1995). In vitro packaging of individual genomic segments of bacteriophage Φ6 RNA: Serial dependence relationships. J. Virol. 69, 2926-2931.
21. Romanova, L. I., Blinov, V. M., Tolskaya, E. A., Viktorova, E. G., Kolesnikowa, M. S., Guseva, E. A., and Agol, V. I. (1986). The primary structure of crossover regions of intertypic poliovirus recombinants: A model of recombination between RNA genomes. Virology 155, 202-213.
22. Surratt, C. K., Milan, S. C., and Chamberlin, M. J. (1991). Spontaneous cleavage of RNA in ternary complexes of Escherichia coli RNA polymerase and its significance for the mechanism of transcription. Proc. Natl. Acad. Sci. USA 88, 7983-7987.
23. Van Dijk, A. A., Frilander, M., and Bamford, D. H. (1995). Differentiation between minus-and plus-strand synthesis: Polymerase activity of dsRNA bacteriophage Φ6 in an in vitro packaging and replication system. Virology 211, 320-323.
24. Yanisch-Perron, C., Vieira, J., and Messing, J. (1985). Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33, 103-119.