메뉴 건너뛰기




Volumn 12, Issue 3, 2003, Pages 245-261

Analysis of microsatellites in major crops assessed by computational and experimental approaches

Author keywords

Cross species amplification; Development; EST SSR; Frequency; Molecular markers

Indexed keywords

BIOMARKERS; DNA SEQUENCES; NUCLEOTIDES; POLYMERASE CHAIN REACTION;

EID: 0344152917     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1026346121217     Document Type: Article
Times cited : (199)

References (34)
  • 1
    • 0032525214 scopus 로고    scopus 로고
    • Microsatellite instability in human solid tumors
    • Arzimanoglou I.I., Gilbert F. and Barber H.R.K. 1998. Microsatellite instability in human solid tumors. Cancer 82: 1808-1820.
    • (1998) Cancer , vol.82 , pp. 1808-1820
    • Arzimanoglou, I.I.1    Gilbert, F.2    Barber, H.R.K.3
  • 2
    • 0028407381 scopus 로고
    • Trinucleotide repeat expansions and human genetic disease
    • Bates G. and Lehrach H. 1994. Trinucleotide repeat expansions and human genetic disease. BioEssays 16: 277-284.
    • (1994) BioEssays , vol.16 , pp. 277-284
    • Bates, G.1    Lehrach, H.2
  • 3
    • 0027239768 scopus 로고
    • Grasses as a single genetic system: Genome composition, colinearity and compatibility
    • Bennetzen J.L. and Freeling M. 1993. Grasses as a single genetic system: Genome composition, colinearity and compatibility. Trends in Genetics 9: 259-261.
    • (1993) Trends in Genetics , vol.9 , pp. 259-261
    • Bennetzen, J.L.1    Freeling, M.2
  • 4
    • 0028146860 scopus 로고
    • Determination of evolutionary relationships among sheep breeds using microsatellites
    • Buchanan F.C., Adams L.J., Littlejohn R.P., Maddox J.F. and Crawford A.M. 1994. Determination of evolutionary relationships among sheep breeds using microsatellites. Genomics 22: 397-403.
    • (1994) Genomics , vol.22 , pp. 397-403
    • Buchanan, F.C.1    Adams, L.J.2    Littlejohn, R.P.3    Maddox, J.F.4    Crawford, A.M.5
  • 5
    • 0033782605 scopus 로고    scopus 로고
    • Computational and experimental characterization of physically clustered simple sequence repeats in plants
    • Cardle L., Ramsay L., Milbourne D., Macaulay M., Marshall D. and Waugh R. 2000. Computational and experimental characterization of physically clustered simple sequence repeats in plants. Genetics 156: 847-854.
    • (2000) Genetics , vol.156 , pp. 847-854
    • Cardle, L.1    Ramsay, L.2    Milbourne, D.3    Macaulay, M.4    Marshall, D.5    Waugh, R.6
  • 6
    • 0036434401 scopus 로고    scopus 로고
    • Microsatellites in Oryza and other plant species
    • Chen X., Cho Y.G. and McCouch S.R. 2002. Microsatellites in Oryza and other plant species. Mol Gen Genomics 268: 331-343.
    • (2002) Mol. Gen. Genomics , vol.268 , pp. 331-343
    • Chen, X.1    Cho, Y.G.2    McCouch, S.R.3
  • 7
    • 0030266285 scopus 로고    scopus 로고
    • Maize simple repetitive DNA sequences: Abundance and allele variation
    • Chin E.C.L., Senior M.L., Shu H. and Smith J.S.C. 1996. Maize simple repetitive DNA sequences: abundance and allele variation. Genome 39: 866-873.
    • (1996) Genome , vol.39 , pp. 866-873
    • Chin, E.C.L.1    Senior, M.L.2    Shu, H.3    Smith, J.S.C.4
  • 8
    • 0031944778 scopus 로고    scopus 로고
    • Microsatellite DNA polymorphism divergence in Triticum dicoccoides accessions highly resistant to yellow rust
    • Fahima T., Röder M.S., Grama A. and Nevo E. 1998. Microsatellite DNA polymorphism divergence in Triticum dicoccoides accessions highly resistant to yellow rust. Theor. Appl. Genet. 96: 187-195.
    • (1998) Theor. Appl. Genet. , vol.96 , pp. 187-195
    • Fahima, T.1    Röder, M.S.2    Grama, A.3    Nevo, E.4
  • 9
    • 0348087039 scopus 로고    scopus 로고
    • Microsatellite polymorphism in natural populations of wild emmer wheat, Triticum dicoccoides, in Israel
    • Fahima T., Röder M.S., Wendehake K., Kirzhner V.M., Nevo E. 2002. Microsatellite polymorphism in natural populations of wild emmer wheat, Triticum dicoccoides, in Israel. Theor. Appl. Genet. 104: 17-29.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 17-29
    • Fahima, T.1    Röder, M.S.2    Wendehake, K.3    Kirzhner, V.M.4    Nevo, E.5
  • 10
    • 0026759696 scopus 로고
    • Evidence for orthologous seed weight genes in cowpea and mungbean based upon RFLP mapping
    • Fatokun C.A., Menacio-Hautea D.I., Danesh D. and Young N.D. 1992. Evidence for orthologous seed weight genes in cowpea and mungbean based upon RFLP mapping. Genetics 132: 841-846.
    • (1992) Genetics , vol.132 , pp. 841-846
    • Fatokun, C.A.1    Menacio-Hautea, D.I.2    Danesh, D.3    Young, N.D.4
  • 11
  • 12
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryia sativa L. ssp. Japonica)
    • Goff S.A., Ricke D., Lan T.H., et al. 2002. A draft sequence of the rice genome (Oryia sativa L. ssp. Japonica). Sci. 296: 92-100.
    • (2002) Sci. , vol.296 , pp. 92-100
    • Goff, S.A.1    Ricke, D.2    Lan, T.H.3
  • 14
    • 0029597867 scopus 로고
    • The contribution of slippage-like processes to genome evolution
    • Hancock J.M. 1995. The contribution of slippage-like processes to genome evolution. J. Mol. Evol. 41: 1038-1047.
    • (1995) J. Mol. Evol. , vol.41 , pp. 1038-1047
    • Hancock, J.M.1
  • 15
    • 0036943335 scopus 로고    scopus 로고
    • Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers
    • Huang X.Q., Börner A.B., Röder M.S. and Ganal M.W. 2002. Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers. Theor. Appl. Genet. 105: 699-707.
    • (2002) Theor. Appl. Genet. , vol.105 , pp. 699-707
    • Huang, X.Q.1    Börner, A.B.2    Röder, M.S.3    Ganal, M.W.4
  • 16
    • 0036010770 scopus 로고    scopus 로고
    • Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat
    • Kantety R.V., La Rota M., Matthews D.E. and Sorrells M.E. 2002. Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat. Plant. Mol. Biol. 48: 501-510.
    • (2002) Plant. Mol. Biol. , vol.48 , pp. 501-510
    • Kantety, R.V.1    La Rota, M.2    Matthews, D.E.3    Sorrells, M.E.4
  • 17
    • 0031850940 scopus 로고    scopus 로고
    • Genetic analysis of the dwarfing gene Rht8 in wheat. Part I. Molecular mapping of Rht8 on the short arm of chromosome 2D of bread wheat (Triticum aestivum L.)
    • Korzun V., Röder M.S., Ganal M.W., Worland A.J. and Law C.N. 1998. Genetic analysis of the dwarfing gene Rht8 in wheat. Part I. Molecular mapping of Rht8 on the short arm of chromosome 2D of bread wheat (Triticum aestivum L.). Theor. Appl. Genet. 96: 1104-1109.
    • (1998) Theor. Appl. Genet. , vol.96 , pp. 1104-1109
    • Korzun, V.1    Röder, M.S.2    Ganal, M.W.3    Worland, A.J.4    Law, C.N.5
  • 18
    • 0030858807 scopus 로고    scopus 로고
    • Intrachromosomal mapping of the genes fro dwarfing (Rht12) and vernalisation response (Vrn1) in wheat by using RFLP and microsatellite markers
    • Korzun V., Röder M.S., Worland A.J. and Börner A.B. 1997. Intrachromosomal mapping of the genes fro dwarfing (Rht12) and vernalisation response (Vrn1) in wheat by using RFLP and microsatellite markers. Plant Breeding 116: 227-232.
    • (1997) Plant Breeding , vol.116 , pp. 227-232
    • Korzun, V.1    Röder, M.S.2    Worland, A.J.3    Börner, A.B.4
  • 19
    • 0034525311 scopus 로고    scopus 로고
    • The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars
    • Li C.D., Rossnagel B.G. and Scoles G.J. 2000. The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars. Theor. Appl. Genet. 101: 1259-1268.
    • (2000) Theor. Appl. Genet. , vol.101 , pp. 1259-1268
    • Li, C.D.1    Rossnagel, B.G.2    Scoles, G.J.3
  • 20
    • 0036945046 scopus 로고    scopus 로고
    • Identification of microsatellite markers linked to Russian wheat aphid resistance genes Dn4 and Dn6
    • Liu X.M., Smith C.M. and Gill B.S. 2002. Identification of microsatellite markers linked to Russian wheat aphid resistance genes Dn4 and Dn6. Theor. Appl. Genet. 104: 1042-1048.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 1042-1048
    • Liu, X.M.1    Smith, C.M.2    Gill, B.S.3
  • 21
    • 0036950802 scopus 로고    scopus 로고
    • Bay-0 x Shahdara recombinant inbred line population: A powerful tool for the genetic dissection of complex traits in Arabidopsis
    • Loudet O., Chaillou S., Camilleri C., Bouchez D. and Daniel-Vedele F. 2002. Bay-0 x Shahdara recombinant inbred line population: a powerful tool for the genetic dissection of complex traits in Arabidopsis. Theor. Appl. Genet. 104: 1173-1184.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 1173-1184
    • Loudet, O.1    Chaillou, S.2    Camilleri, C.3    Bouchez, D.4    Daniel-Vedele, F.5
  • 23
    • 0347579843 scopus 로고    scopus 로고
    • Microsatellite in Zea-variability, patterns of mutations, and use for evolutionary studies
    • Matsuoka Y., Mitchell S.E., Kresovich S., Goodman M. and Doebley J. 2002. Microsatellite in Zea-variability, patterns of mutations, and use for evolutionary studies. Theor. Appl. Genet. 104: 436-450.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 436-450
    • Matsuoka, Y.1    Mitchell, S.E.2    Kresovich, S.3    Goodman, M.4    Doebley, J.5
  • 24
    • 0036478903 scopus 로고    scopus 로고
    • Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes
    • Morgante M., Hanafey M. and Powell W. 2002. Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes. Nat. Genet. 30: 194-200.
    • (2002) Nat. Genet. , vol.30 , pp. 194-200
    • Morgante, M.1    Hanafey, M.2    Powell, W.3
  • 25
    • 0033056875 scopus 로고    scopus 로고
    • Microsatellite tagging of the stripe-rust resistance gene YrH52 derived from wild emmer wheat, Triticum dicoccoides, and suggestive negative crossover interference on chromosome 1B
    • Peng J.H., Fahima T., Röder M.S., Li Y.C., Dahan A., Grama A., Ronin Y.I., Korol A.B. and Nevo E. 1999. Microsatellite tagging of the stripe-rust resistance gene YrH52 derived from wild emmer wheat, Triticum dicoccoides, and suggestive negative crossover interference on chromosome 1B. Theor. Appl. Genet. 98: 862-872.
    • (1999) Theor. Appl. Genet. , vol.98 , pp. 862-872
    • Peng, J.H.1    Fahima, T.2    Röder, M.S.3    Li, Y.C.4    Dahan, A.5    Grama, A.6    Ronin, Y.I.7    Korol, A.B.8    Nevo, E.9
  • 26
    • 0030985156 scopus 로고    scopus 로고
    • The complex pathology of trinucleotide repeats
    • Reddy P.S. and Housman D.E. 1997. The complex pathology of trinucleotide repeats. Curr. Opin. Cell. Biol. 9: 364-372.
    • (1997) Curr. Opin. Cell. Biol. , vol.9 , pp. 364-372
    • Reddy, P.S.1    Housman, D.E.2
  • 30
    • 0034882994 scopus 로고    scopus 로고
    • Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): Frequency, length variation, transposon association, and genetic marker potential
    • Temnykh S., DeClerck G., Lukashova A., Lipovich L., Cartinhour S. and McCouch S. 2001. Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon association, and genetic marker potential. Genome Res. 11: 1441-1452.
    • (2001) Genome Res. , vol.11 , pp. 1441-1452
    • Temnykh, S.1    DeClerck, G.2    Lukashova, A.3    Lipovich, L.4    Cartinhour, S.5    McCouch, S.6
  • 31
    • 0033858199 scopus 로고    scopus 로고
    • Microsatellites in different eukaryotic genomes: Survey and analysis
    • Tóth G., Gáspári Z. and Jurka J. 2000. Microsatellites in different eukaryotic genomes: Survey and analysis. Genome Res 10: 967-981.
    • (2000) Genome Res. , vol.10 , pp. 967-981
    • Tóth, G.1    Gáspári, Z.2    Jurka, J.3
  • 32
    • 0027514825 scopus 로고
    • Trinucleotide repeat expansions in neurological disease
    • Warren S.T. and Nelson D.L. 1993. Trinucleotide repeat expansions in neurological disease. Curr. Opin. Neurobiol. 3: 757-759.
    • (1993) Curr. Opin. Neurobiol. , vol.3 , pp. 757-759
    • Warren, S.T.1    Nelson, D.L.2
  • 34
    • 0344583737 scopus 로고    scopus 로고
    • Chromosomal location of a Triticum dicoccoides-derived powdery mildew resistance gene in common wheat by using microsatellite markers
    • Xie C.J., Sun Q.X., Ni Z.F., Yang T.M., Nevo E. and Fahima T. 2002. Chromosomal location of a Triticum dicoccoides-derived powdery mildew resistance gene in common wheat by using microsatellite markers. Theor. Appl. Genet. 104: 1164-1172.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 1164-1172
    • Xie, C.J.1    Sun, Q.X.2    Ni, Z.F.3    Yang, T.M.4    Nevo, E.5    Fahima, T.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.