Phylogenetic Relationships of the Afro-Malagasy Members of the Large Genus Begonia Inferred from trnL Intron Sequences

Systematic Botany

Volumn 28, Issue 4, 2003, Pages 693-704

  Plana, Vanessa ^a  

^a ROYAL BOTANIC GARDEN EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BEGONIA; BEGONIA IUCUNDA; BEGONIACEAE; EMBRYOPHYTA;

EID: 0344099604     PISSN: 03636445     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (55)

1. ARENDS, J. C. 1992. The biosystematics of Begonia squamulosa Hook. f. and affiliated species in section Tetraphila A.DC. Wageningen Agricultural University Papers 91: 1-223.
2. BARANOV, A. I. and F. A. BARKLEY. 1974. The sections of the genus Begonia. Boston: Northeastern University.
3. BATEMAN, R. M. 1999. Integrating molecular and morphological evidence of evolutionary radiations. Pp. 432-471 in Molecular systematics and plant evolution, eds. P. M. Hollingsworth, R. M. Bateman, and R. J. Gornall. London: Taylor & Francis.
4. BENTHAM, G. and J. D. HOOKER. 1867. Begoniaceae. Pp. 841-844 in Genera Plantarum vol. 1. London.
5. BERG, R. G. VAN DEN. 1984. Pollen morphology of the genus Begonia in Africa. In Studies in Begoniaceae II, ed. J. J. F. E. de Wilde. Agricultural University Wageningen Papers 84: 5-94.
6. BREMER, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42: 795-803.
7. _ and O. ERIKSSON. 1992. Evolution of fruit characters and dispersal modes in the tropical family Rubiaceae. Biological Journal of the Linnean Society 47: 79-95.
8. CANDOLLE, A. DE. 1859. Mémoire sur la famille des Bégoniaceae. Annales des Sciences Naturelles - Botanique Serie IV, 11: 92-149.
9. CLAUSING, G., K. MEYER, and S. S. RENNER. 2000. Correlations among fruit traits and evolution of different fruits within Melastomataceae. Botanical Journal of the Linnean Society 133: 303-326.
10. CRUICKSHANK, R. H., K. P. JOHNSON, V. S. SMITH, R. J. ADAMS, D. H. CLAYTON, and R. D. M. PAGE. 2001. Phylogenetic analysis of partial sequences of elongation factor 1α identifies major groups of lice (Insecta: Phthiraptera). Molecular Phylogenetics and Evolution 19: 202-215.
11. DOORENBOS, J., M. S. M. SOSEF, and J. J. F. E. DE WILDE. 1998. The sections of Begonia - studies in Begoniaceae VI. Wageningen Agricultural University Papers 98: 5-266.
12. DOYLE, J. J. and J. L. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
13. ERIKSSON, T. 1998. AutoDecay ver. 4.0 (program distributed by the author). Stockholm: Bergius Foundation, Royal Swedish Academy of Sciences.
14. FORREST, L. L. 2000. A phylogeny of Begoniaceae Bercht. & J. Presl. PhD thesis. University of Glasgow.
15. GIRIBET, G. and W. C. WHEELER. 1999. The position of arthropods in the animal kingdom: Ecdysozoa, islands, trees, and the "parsimony ratchet". Molecular Phylogenetics and Evolution 13: 619-623.
16. GOLOBOFF, P. 1993. Nona. Software and documentation by the author, Tucumán, Argentina.
17. HUGHES, M. and A. G. MILLER. 2002. A new endemic species of Begonia (Begoniaceae) from the Socotra Archipelago. Edinburgh Journal of Botany 59: 273-281.
18. nd ed., vol. 21, ed. A. Engler and K. Prantl. Liepzig: W. Engelmann.
19. _. 1961. Monographische Revision der Begoniaceen Afrikas I. Sekt. Augustia und Rostrobegonia sowie einige neue Sippen aus anderen Sektonien. Botanische Jahrbücher 81: 106-188.
20. JARAMILLO, M. A. and P. MANOS. 2001. Phylogeny and patterns of floral diversity in the genus Piper (Piperaceae). American Journal of Botany 88: 706-716.
21. JUDD, W. S., C. S. CAMPBELL, E. A. KELLOG, and P. F. STEVENS. 1999. Plant systematics - a phylogenetic approach. Sunderland, Massachusett: Sinauer Associates, Inc.
22. KERAUDREN-AYMONIN, M. 1983. Begoniacées. Pp. 7-108 in Flore de Madagascar et des Comores, Famille 144, ed. J.-F. Leroy. Paris: Muséum national d'histoire naturelle.
23. KLAZENGA, N., J. J. F. E. DE WILDE, and R. J. QUENÉ. 1994. Begonia sect. Mezierea (Gaud.) Warb., a taxonomic revision. Bulletin du Jardin Botanique National de Belgique 63: 263-312.
24. KLOTZSCH, J. F. 1855. Begoniaceen. Abhandlungen der Könlichen Akademie der Wissenschaften in Berlin 1854: 1-135.
25. LANGE, A. DE and F. BOUMAN. 1992. Seed micromorphology of the genus Begonia in Africa: taxonomic and ecological implications. In Studies in Begoniaceae III, ed. J. J. F. E. de Wilde. Wageningen Agricultural University Papers 91: 1-82.
26. MABBERLEY, D. J. 1993. The plant-book. Cambridge: Cambridge University Press.
27. MUENCHOW, G. E. 1987. Is dioecy asociated with fleshy fruit? American Journal of Botany 74: 287-293.
28. NIXON, K. C. 1999a. Winclada (beta) version 0.9. Published by the author, Ithaca, NY.
29. _. 1999b. The parsimony ratchet, a method for rapid parsimony analysis. Cladistics 15: 407-414.
30. OLIVER, D. 1866. On Hillebrandia, a new genus of Begoniaceae. Transactions of the Linnean Society 25: 361-364.
31. OLMSTEAD, R. G., P. A. REEVES, and A. C. YEN. 1998. Patterns of sequence evolution and implications for parsimony analysis of chloroplast DNA. Pp. 164-187 in Molecular systematics of plants II: DNA sequencing, eds. D. E. Soltis, P. S. Soltis, and J. J. Doyle. Boston: Kluwer Academic Publishers.
32. PELSER, P. B., B. GRAVENDEEL, and R. VAN DER MEIJDEN. 2002. Tackling speciose genera: species composition and phylogenetic position of Senecio sect. Jacobaea (Asteraceae) based on plastid and nrDNA sequences. American Journal of Botany 89: 929-939.
33. POSADA, D. and K. A. CRANDALL. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
34. PENNINGTON, R. T. and B. GEMEINHOLZER. 2000. Cryptic clades, fruit wall morphology and biology of Andira (Leguminosae: Papilionoideae). Botanical Journal of the Linnean Society 134: 267-286.
35. QUICKE, D. L., J. TAYLOR, and A. PURVIS. 2001. Changing the landscape: a new strategy for estimating large phylogenies. Systematic Biology 50: 60-66.
36. REITSMA, J. M. 1983. Placentation in begonias from the African continent. Mededelingen Lanbouwhogeschool Wageningen 83-9: 21-53.
37. _. 1985. Begonia section Baccabegonia Reitsma, sect. nov. Agricultural University Wageningen Papers 84: 95-111.
38. RICHARDS, P. W. 1973. Africa, the "Odd Man Out". Pp. 21-26 in Tropical forest ecosystems of Africa and South America: a comparative review, eds. B. J. Meggers, E. S. Ayensu, and W. D. Duckworth. Washington D.C.: Smithsonian Institution Press.
39. RICHARDSON, J. E., M. F. FAY, Q. C. B. CRONK, D. BOWMAN, and M. W. CHASE. 2000. A phylogenetic analysis of Rhamnaceae using rbcL and trnL-F plastid DNA sequences. American Journal of Botany 87: 1309-1324.
40. SANDERSON, M. J. and J. J. DOYLE. 1993. Phylogenetic relationships in North American Astragalus (Fabaceae) based on chloroplast DNA restriction site variation. Systematic Botany 18: 394-408.
41. SIMMONS, M. P. and H. OCHOTERENA. 2000. Gaps as characters in sequence-based phylogenetic analyses. Systematic Biology 49: 369-381.
42. SOSEF, M. S. M. 1994. Refuge begonias - Taxonomy, phylogeny and historical biogeography of Begonia sect. Loasibegonia and sect. Scutobegonia in relation to glacial rain forest refuges in Africa. Studies in Begoniaceae V. Wageningen Agricultural University Papers 94-1: 1-306.
43. SWENSEN, S. M., B. C. MULLIN, and M. W. CHASE. 1994. Phylogenetic affinities of Datiscaceae based on an analysis of nucleotide sequences from the plastid rbcL gene. Systematic Botany 19: 157-168.
44. _, J. N. LUTHI, and L. H. RIESEBERG. 1998. Datiscaceae revisited: monophyly and the sequence of breeding system evolution. Systematic Botany 23: 157-169.
45. SWOFFORD, D. L. 2000. Paup*. Phylogenetic analysis using parsimony (* and other methods). Version 4.0b7. Sunderland, Massachussets: Sinauer Associates.
46. _ & D. P. BEGLE. 1993. Paup. Phylogenetic analysis using pasimony. User's manual. Washington D.C.: Laboratory of Molecular Systematics. Smithsonian Institute.
47. TABERLET, P. L., L. GIELLY, G. PATOU, and J. BOUVET. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
48. WAGSTAFF, S. J. and M. I. DAWSON. 2000. Classification, origin, and patterns of diversification of Corynocarpus (Corynocarpaceae) inferred from DNA sequences. Systematic Botany 25: 134-149.
49. st ed., teil 3 vol. 6a, ed. A. Engler and K. Prantl. Liepzig: W. Engelmann.
50. WILDE, J. J. F. E. DE. 1984. Begonia section Cristasemen J. J. de Wilde, sect. nov. In Studies in Begoniaceae II, ed. J. J. F. E. de Wilde. Agricultural University of Wageningen Papers 84: 113-129.
51. _. 2002. Begonia section Tetraphila: a taxonomic revision. In Studies in Begoniaceae VII, ed. J. J. F. E. de Wilde Wageningen University Papers 2001-2: 6-258.
52. _ and J. C. ARENDS. 1980. Begonia section Squamibegonia Warb.: a taxonomic revision. Miscellaneous Papers Landbouwhogeschool Wageningen 19: 377-421.
53. _ and _. 1989. Begonia salaziensis (Gaud.) Warb.: taxonomy and placentation. Acta Botanica Neerlandica 38: 31-39.
54. _ and V. PLANA. 2003. A new section of Begonia (Begoniaceae) from tropical west central Africa. Edinburgh Journal of Botany.
55. WOJCIECHOWSKI, M. F., M. J. SANDERSON, B. G. BALDWIN, and M. J. DONOGHUE. 1993. Monophyly of aneuploid Astragalus (Fabaceae): evidence from nuclear ribosomal DNA internal transcribed spacer sequences. American Journal of Botany 80: 711-722.